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The map label for this gene is rbn [C]

Identifier: 91784445

GI number: 91784445

Start: 3421244

End: 3422554

Strand: Reverse

Name: rbn [C]

Synonym: Bxe_A1354

Alternate gene names: 91784445

Gene position: 3422554-3421244 (Counterclockwise)

Preceding gene: 91784451

Following gene: 91784441

Centisome position: 69.91

GC content: 62.47

Gene sequence:

>1311_bases
TTGTCCAGGGTGCGTTTCGATCTCGACACGCTCAAAAGGCTCGCGCAGTTTGCCGCGCAGCGCAGCAGCGAAGACCGTAT
TCCGCAGGTGGCCGGCAGCCTCACGTTCACCACCATGCTTTCGCTCGTGCCGCTCGCCACGGTGGCGTTCGCGCTGTTCA
CCGCGTTTCCGATCTTTGCATCGTTCCAGATGTCGCTGCAGATTTTTCTTGCCGACCATCTGATGCCCGCGCAACTCAAC
AGTCAGATCTTCAATTATCTGAACCAGTTTGCTTCGAAGGCGAAGGGCCTGACGACCATCGGTATGATTTTTTTGTTCGT
CACCGCCGTGATGACGATGATGACGGTCGAATCCGCCTTCAACGTGATCTGGCGCGTGCGCAAGGCGCGGCCGATCGCGC
AGCGCATTCTGGTGTATTGGGCGATCATCACGCTCGGCCCGATTCTGATCGGCGTGAGCCTGTCGATTTCATCGTACCTG
TTCACGCAATCCATGACGTTCACGGCGGCGCAGCGCATGACGCCGGTGATCGAGTGGGCGCTCGCCGGCGCCGCGCTGCC
GCTCACCGCGGCCGCCTTCACGATTCTCTACGTCTATCTGCCGAATTGCCGCGTGGAATGGCGCGACGCGGTGATCGGCG
GTGTGACCGCCGCGATCGCTTTCGAGCTCGCGAAGCGCGGCTTCGGCTATTACGTGCGGCGCATTCCAACCTACACCGCG
GTGTACGGCGCATTCGCGGCCGTGCCGCTGTTTCTGCTATGGATGTACCTGTGCTGGTTCATCACGCTCGCGGGCGCGAT
GATCGCGTCGGCGTTGCCGGCCATTCGCATCGGCCAGTTTCACCGGCCCACCTTCGAGGGCAGTAATCTGTTCGACTCGC
TCGAACTGCTCGCGCGGCTCTCGGAAGCGCGCGACGCGGGCAAGCGCGGCTACACCGTGCCGGAACTCTCGCGCATGCTT
CGCCGCGATATGGGCACCACGATCAACCTGCTGGAAAAGCTCGAGGAGATCGAGTGGATCGCGCGCTTGCAGGAGGACGG
GGCACGTCCGCATTTCCTGCTGCTGGCAAACCCGGCGCAGATTACGGTCGAACGTCTGTTCGGCCTGTTCGTGATCGACC
GCGCGGAACTCGGGTATCAACTCGAACTGGCGTCCACTCGCGTGGATGGTGAAATGCTGCTGGCCGCGCTGGAGAACGAC
AAACTGAAGGTGACGCTCGCCGCGTTGCTGACAGCGCGCGCAGCCGCCCGTGCCGCACAGGCCGCGGAGAACGAATCGGG
CACGTCTTCCATGCCGCATCAGGCAGCTTGA

Upstream 100 bases:

>100_bases
ATAGGGGCTGGGTTCGCTCGATAGGCCACCCATAGCCGTTCGGCCAGGGCTCGTGAGCGGTCCTGAAACACCGCTACAGG
AAGCCAGGGAGGTGAGTTTG

Downstream 100 bases:

>100_bases
AGTCGGCTTGAAGTCGGCGTCAAGCCGATCCATGCAGTCTCTCTCGATGCCGCCGCATGAGGCTTCCTGACATGCGCCTC
GATGTCACGTCACGCCGGCG

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSRVRFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQMSLQIFLADHLMPAQLN
SQIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVIWRVRKARPIAQRILVYWAIITLGPILIGVSLSISSYL
FTQSMTFTAAQRMTPVIEWALAGAALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTA
VYGAFAAVPLFLLWMYLCWFITLAGAMIASALPAIRIGQFHRPTFEGSNLFDSLELLARLSEARDAGKRGYTVPELSRML
RRDMGTTINLLEKLEEIEWIARLQEDGARPHFLLLANPAQITVERLFGLFVIDRAELGYQLELASTRVDGEMLLAALEND
KLKVTLAALLTARAAARAAQAAENESGTSSMPHQAA

Sequences:

>Translated_436_residues
MSRVRFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQMSLQIFLADHLMPAQLN
SQIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVIWRVRKARPIAQRILVYWAIITLGPILIGVSLSISSYL
FTQSMTFTAAQRMTPVIEWALAGAALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTA
VYGAFAAVPLFLLWMYLCWFITLAGAMIASALPAIRIGQFHRPTFEGSNLFDSLELLARLSEARDAGKRGYTVPELSRML
RRDMGTTINLLEKLEEIEWIARLQEDGARPHFLLLANPAQITVERLFGLFVIDRAELGYQLELASTRVDGEMLLAALEND
KLKVTLAALLTARAAARAAQAAENESGTSSMPHQAA
>Mature_435_residues
SRVRFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQMSLQIFLADHLMPAQLNS
QIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVIWRVRKARPIAQRILVYWAIITLGPILIGVSLSISSYLF
TQSMTFTAAQRMTPVIEWALAGAALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTAV
YGAFAAVPLFLLWMYLCWFITLAGAMIASALPAIRIGQFHRPTFEGSNLFDSLELLARLSEARDAGKRGYTVPELSRMLR
RDMGTTINLLEKLEEIEWIARLQEDGARPHFLLLANPAQITVERLFGLFVIDRAELGYQLELASTRVDGEMLLAALENDK
LKVTLAALLTARAAARAAQAAENESGTSSMPHQAA

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family

Homologues:

Organism=Escherichia coli, GI1790319, Length=257, Percent_Identity=40.0778210116732, Blast_Score=191, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3061_BURXL (Q13WE0)

Other databases:

- EMBL:   CP000270
- RefSeq:   YP_559651.1
- GeneID:   4004107
- GenomeReviews:   CP000270_GR
- KEGG:   bxe:Bxe_A1354
- HOGENOM:   HBG451793
- OMA:   SVMTMMT
- ProtClustDB:   CLSK930790
- HAMAP:   MF_00672
- InterPro:   IPR017039
- InterPro:   IPR004664
- TIGRFAMs:   TIGR00765

Pfam domain/function: PF03631 Ribonuclease_BN

EC number: 3.1.-.- [C]

Molecular weight: Translated: 48296; Mature: 48165

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a22e9e8)-; HASH(0x1a308df0)-; HASH(0x1a4c0ed4)-; HASH(0x1981eaa8)-; HASH(0x194bd418)-; HASH(0x19f2a524)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCCCCCCH
>Mature Secondary Structure 
SRVRFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFA
CCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFQMSLQIFLADHLMPAQLNSQIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NVIWRVRKARPIAQRILVYWAIITLGPILIGVSLSISSYLFTQSMTFTAAQRMTPVIEWA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGAALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTA
HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
VYGAFAAVPLFLLWMYLCWFITLAGAMIASALPAIRIGQFHRPTFEGSNLFDSLELLARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHH
SEARDAGKRGYTVPELSRMLRRDMGTTINLLEKLEEIEWIARLQEDGARPHFLLLANPAQ
HHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHH
ITVERLFGLFVIDRAELGYQLELASTRVDGEMLLAALENDKLKVTLAALLTARAAARAAQ
HHHHHHHHHHHEEHHHCCEEEEEHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AAENESGTSSMPHQAA
HHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA