| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yhcV [H]
Identifier: 91784441
GI number: 91784441
Start: 3417721
End: 3418182
Strand: Reverse
Name: yhcV [H]
Synonym: Bxe_A1358
Alternate gene names: 91784441
Gene position: 3418182-3417721 (Counterclockwise)
Preceding gene: 91784445
Following gene: 91784440
Centisome position: 69.82
GC content: 58.44
Gene sequence:
>462_bases ATGCGAGTCAGCGACATCCTCAAAGTCAAAGGCAACACCCTTTTCACGGTTACGCCGGATACCACGCTGCACGACGCAGT CAATACGATGGCGGAGCACGATATCGGCTCGCTGGTGGTGATGGAATACGGCGACCTGGTCGGCATGCTGACTTTTCGCG AGATTATTTTGACGCTGAGCAAGAACGGCGGCAGCGTCGGCACGTCCACCATCCGCAAGGTCATGGACGATCATCCGCTT ACCTGCACACCCGAAACGGACGTGAACGAGGTTCGCCGCATGATGCTCGAACACCACGTGCGTTATCTGCCGGTGCTGGA AAGCCGCACGCTGATGGGCGTGATCTCGTTCTACGACGTCGCCAAGGCGGTGGTTGAAGAGCAGGGCTTCGAAAACCGCA TGCTCAAGGCCTATATCCGCGACTGGCCGGAAGAACAGCAGGAACAGCAGCCGGCGCGCTAA
Upstream 100 bases:
>100_bases CGCCTTGGCGGGCGGCCCGCTTTCCTTTTATGGGTCTTTCCGCTAGGATCGAAAGTCATTGATGTATTACGAGCTTAGCG GGCATTACGGGAGACAGATC
Downstream 100 bases:
>100_bases TGCGCGGCGACTCACTGCGACGCTCCAGCCGTTGCCGTGAGCGCGAAAATGTGGTCAAGGAGCGGTCAAGGCGCGCGCGA AAGCGTGCGCTTTTTTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVMDDHPL TCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDVAKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR
Sequences:
>Translated_153_residues MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVMDDHPL TCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDVAKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR >Mature_153_residues MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVMDDHPL TCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDVAKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 17396; Mature: 17396
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLS CCCHHHEEECCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC KNGGSVGTSTIRKVMDDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDV CCCCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR HHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCC >Mature Secondary Structure MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLS CCCHHHEEECCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC KNGGSVGTSTIRKVMDDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDV CCCCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR HHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]