Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yhcV [H]

Identifier: 91784441

GI number: 91784441

Start: 3417721

End: 3418182

Strand: Reverse

Name: yhcV [H]

Synonym: Bxe_A1358

Alternate gene names: 91784441

Gene position: 3418182-3417721 (Counterclockwise)

Preceding gene: 91784445

Following gene: 91784440

Centisome position: 69.82

GC content: 58.44

Gene sequence:

>462_bases
ATGCGAGTCAGCGACATCCTCAAAGTCAAAGGCAACACCCTTTTCACGGTTACGCCGGATACCACGCTGCACGACGCAGT
CAATACGATGGCGGAGCACGATATCGGCTCGCTGGTGGTGATGGAATACGGCGACCTGGTCGGCATGCTGACTTTTCGCG
AGATTATTTTGACGCTGAGCAAGAACGGCGGCAGCGTCGGCACGTCCACCATCCGCAAGGTCATGGACGATCATCCGCTT
ACCTGCACACCCGAAACGGACGTGAACGAGGTTCGCCGCATGATGCTCGAACACCACGTGCGTTATCTGCCGGTGCTGGA
AAGCCGCACGCTGATGGGCGTGATCTCGTTCTACGACGTCGCCAAGGCGGTGGTTGAAGAGCAGGGCTTCGAAAACCGCA
TGCTCAAGGCCTATATCCGCGACTGGCCGGAAGAACAGCAGGAACAGCAGCCGGCGCGCTAA

Upstream 100 bases:

>100_bases
CGCCTTGGCGGGCGGCCCGCTTTCCTTTTATGGGTCTTTCCGCTAGGATCGAAAGTCATTGATGTATTACGAGCTTAGCG
GGCATTACGGGAGACAGATC

Downstream 100 bases:

>100_bases
TGCGCGGCGACTCACTGCGACGCTCCAGCCGTTGCCGTGAGCGCGAAAATGTGGTCAAGGAGCGGTCAAGGCGCGCGCGA
AAGCGTGCGCTTTTTTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVMDDHPL
TCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDVAKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR

Sequences:

>Translated_153_residues
MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVMDDHPL
TCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDVAKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR
>Mature_153_residues
MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVMDDHPL
TCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDVAKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 17396; Mature: 17396

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLS
CCCHHHEEECCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
KNGGSVGTSTIRKVMDDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDV
CCCCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR
HHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MRVSDILKVKGNTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGDLVGMLTFREIILTLS
CCCHHHEEECCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
KNGGSVGTSTIRKVMDDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMGVISFYDV
CCCCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAVVEEQGFENRMLKAYIRDWPEEQQEQQPAR
HHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]