| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is aroC [H]
Identifier: 91784439
GI number: 91784439
Start: 3414218
End: 3415318
Strand: Reverse
Name: aroC [H]
Synonym: Bxe_A1360
Alternate gene names: 91784439
Gene position: 3415318-3414218 (Counterclockwise)
Preceding gene: 91784440
Following gene: 91784438
Centisome position: 69.76
GC content: 66.76
Gene sequence:
>1101_bases ATGTCCGGCAACACGCTCGGTACGCTTTTCACTGTCACGACCTTCGGCGAATCGCACGGTCCCGCTATCGGCTGCGTGAT CGACGGCTGCCCGCCGGGCCTGGCGCTCAACGAAGCCGACATCCAGCTGGAGCTCGACCGCCGCAAGCCCGGCACGTCGC GCCACGTCACGCAGCGTCAGGAAGAAGACAAGGTCGAGATCCTCTCGGGCGTGTTCGAAGGCCAGACCACCGGCGCGCCC ATCGCGCTCCTGATCCGCAACACGGACCAGCGCAGCAAGGATTACGGCAACATTGCCGACACGTTCCGTCCGGGCCACGC CGACTACACCTACTGGCAGAAATACGGCATTCGCGACTATCGCGGCGGCGGCCGTTCGTCGGCCCGTCTCACGGCGCCGA CGGTGGCCGCGGGCGCGGTTGCGAAGAAGTGGCTGCGCGAGAAGTTCGGCACGGAGATTCGCGGCTATATGGCCGCGCTC GGTGAAATCGACGTGCCGTTCGTCGACTGGGCGCACGTGCGCGAAAACCCGTTCTTCGTGCCCAACCAGCAGATCGTGCC GCAACTGGAAGCGTATATGGACGCGCTGCGCAAGGAAGGCGACTCGATCGGCGCGCGCATCAACGTGGTGGCCTCCGGCG TGCCGGTCGGCCTCGGCGAGCCGCTGTTCGACCGGCTCGACGCGGACATTGCGCATGCCATGATGGGCATCAACGCGGTG AAGGGCGTCGAAATCGGCGCGGGCTTTGCGAGCGTCGCGCAACGCGGTTCGGTGCACGGCGACGAATTGACGCCGGAGGG CTTCGTCGGCAATCACGCGGGCGGTGTGCTCGGCGGTATTTCGACCGGACAGGACATCACGGTGTCGATCGCGATCAAGC CGACTTCGAGCATTCGCACGCCGCGCCGCTCCATCGACAAGGCGGGGCAACCGGCCGTCGTCGAAACGTTTGGGCGGCAT GACCCGTGCGTCGGCATTCGCGCCACGCCGATCGCCGAATCGATGCTCGCGCTGGTGCTCATCGACCACGCGCTGCGCCA TCGCGCGCAATGCGGCGACGTGTCCGTCAGCACGCCGAAGATCGCGGCGAGCGCGCCTTAA
Upstream 100 bases:
>100_bases TGCGCCCCTGGCCGATCGGCCAGAACCGCCGTACGACGCGGTCCGGTCGCCACGGGGCTGGCATAATAGCGCTTTCCCCG CATTTCTTTGGACGACGCCC
Downstream 100 bases:
>100_bases CGGGGCCTCGCGTTAAGTGCATCTGTATTCGTTCTACGCGGGCAGTGTCGTCTCTCATGACTGATCTCGGTGCCGAGGCG GCAGCAAGCCGCCTCGCGGA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGLALNEADIQLELDRRKPGTSRHVTQRQEEDKVEILSGVFEGQTTGAP IALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAAL GEIDVPFVDWAHVRENPFFVPNQQIVPQLEAYMDALRKEGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSIDKAGQPAVVETFGRH DPCVGIRATPIAESMLALVLIDHALRHRAQCGDVSVSTPKIAASAP
Sequences:
>Translated_366_residues MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGLALNEADIQLELDRRKPGTSRHVTQRQEEDKVEILSGVFEGQTTGAP IALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAAL GEIDVPFVDWAHVRENPFFVPNQQIVPQLEAYMDALRKEGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSIDKAGQPAVVETFGRH DPCVGIRATPIAESMLALVLIDHALRHRAQCGDVSVSTPKIAASAP >Mature_365_residues SGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGLALNEADIQLELDRRKPGTSRHVTQRQEEDKVEILSGVFEGQTTGAPI ALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAALG EIDVPFVDWAHVRENPFFVPNQQIVPQLEAYMDALRKEGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAVK GVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSIDKAGQPAVVETFGRHD PCVGIRATPIAESMLALVLIDHALRHRAQCGDVSVSTPKIAASAP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=360, Percent_Identity=65.8333333333333, Blast_Score=470, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=42.7792915531335, Blast_Score=286, Evalue=3e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 38929; Mature: 38797
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGLALNEADIQLELDRRKPGTSRHVTQRQ CCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHH EEDKVEILSGVFEGQTTGAPIALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKYGIRDY HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAALGEIDVPFVDWAHVRENPFFV CCCCCCCCEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC PNQQIVPQLEAYMDALRKEGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRT CCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSIDKAGQPAVVETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVSVSTPK CHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IAASAP CCCCCC >Mature Secondary Structure SGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGLALNEADIQLELDRRKPGTSRHVTQRQ CCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHH EEDKVEILSGVFEGQTTGAPIALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKYGIRDY HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAALGEIDVPFVDWAHVRENPFFV CCCCCCCCEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC PNQQIVPQLEAYMDALRKEGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRT CCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSIDKAGQPAVVETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVSVSTPK CHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IAASAP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA