| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784438
Identifier: 91784438
GI number: 91784438
Start: 3412674
End: 3414173
Strand: Reverse
Name: 91784438
Synonym: Bxe_A1361
Alternate gene names: NA
Gene position: 3414173-3412674 (Counterclockwise)
Preceding gene: 91784439
Following gene: 91784436
Centisome position: 69.74
GC content: 66.07
Gene sequence:
>1500_bases GTGTCGTCTCTCATGACTGATCTCGGTGCCGAGGCGGCAGCAAGCCGCCTCGCGGATCTGCGCGCGCGTGCCGCCGCACC GCATGCCACCGCTGCCGATTGCCTCGCGTTCGGCCAGACGCTGTTGCAACATGTGGGCCGCGACAAGGCGAGCCAACGTG AAGCACTGGTTGCGCTGGTGCGTGCATACCAACTCGATCCATTCTGCGCGCCCACGCTGTTGCATACGATCGCGCAGACC GCCTTCGTGTTGCGCGATTGGGCGCTGGTCGACTCCGCCACCGGGCTGCTGCTCTCGCACCATGCCGAGGACGCCAACGC GCTGATCTGGCGCGCCGCGGCCGTGCAGCAGCGCGACGACTTCGGCACCGCCGAGGCGCTGTTGCGCGAAGCCGTGCGCG TCGTGCCCGACAATCCGGTGGCGCTGCACAAGCTGGCGTTGTGCATCAAGGAACAGGCGCGATTCGCCGAAGCCGAGGCA TTGCTCCGGCAAGTCCTGGCGCTCTCGCCGGAGAATGCCCATGCGTTGTTCGACCTGTCGGAACTCGAAATCCGCAGCGG ACGTTTCGCCGAGGGTTGGGCGCATTACGAATCGCGCGTCGCGTTTGCCGGCGGCGAACTGAACAACGCGCAGCAGGCGC TCGCTGCGATCAGTGCGCCCTGGCAGGGCGAATCGCTTGCCGGCAGGACGCTGGTGGTCTATGGCGAGCAAGGCAATGGC GATTGTCTCTGGGCGGTACGCTTTCTGCCCAGGTTGGCGGAGCGGGCGCGGCGCGAGGGCGGCCGGGTGATTTTCGGTCA CGACGGGCCGCTGCGCCATCTGTTCGAACGGATGCTGCCCGCCGATCTGCCGCTCGAAACGAGTCTGGAGACACGCCCTG ATTTTCACTGCGGGCTGATGAGCCTGCCGCTGCGGCTCGGCATTTTCGACGCAACGGGGTGGGGCGCTCCGTACTTGAGC GCTGATCCAGCGCTCAGGCAGACATGGCGCGAGCGAGTCGAAGTGCACACGGCCGGCAAACACGGCAAATGCGGTAATCG AAAGGTCGGGCTGGTGTGGAACGGCAATCCGGACCACATCCGCGACATGCGGCGGTCGGTGCCTGTCGGGCAAATCGAAC CGCTGCTGGATGTAGCTGGCGTGAGCTATTTTGCTTTGTCGCCGGGACGCGGAGAGACGGTCGCGCAGTGGCGCGCCAAG GGTTTCGACATCGTCGATCTCACGCATCATTTTCAGTCCGGCTTCGACGATGTCGCGGCGTTGCTGGCGAACCTGGATCT CGTGGTCACGATCGATAGCGGGCCCGCGCATCTGGCGGGGGCGCTCGGCGTCCCGACCTGCCTGATGATCGATCACGTTT CCGCGTGGTTCTGGGGCGACGGATCGCCGGTGACGGCCTGGTACGATTCGATCGGGCTGGTTCGACAGCCGCGCGTCGGC GACTGGACGCCGGTCGTGGCGAAAGTGCGGGAGCGGATTGAAGCGGTGGGGCGGAGTTGA
Upstream 100 bases:
>100_bases CGCAATGCGGCGACGTGTCCGTCAGCACGCCGAAGATCGCGGCGAGCGCGCCTTAACGGGGCCTCGCGTTAAGTGCATCT GTATTCGTTCTACGCGGGCA
Downstream 100 bases:
>100_bases AGCAGCGTGCCTTCACAGCGCCGGCCTCTGAATGCCGGCGCTGTGAAGGCACGCTGCGCGTGCGGAAGTTACATGTTCGG GTAGTTCGGACCGCCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Sulfotransferase; TPR Repeat Containing Protein; TPR Repeat; Exostosin Family Protein; O-Linked N-Acetylglucosamine Transferase; FlbA Protein; Tetratricopeptide Tpr_2 Repeat Protein; Tetratricopeptide TPR_2 Domain-Containing Protein; Methyltransferase Type; Glycosyltransferase Family 9 Tpr Repeat Domain; TPR/Sulfotransferase Domain-Containing Protein; Flagellin Protein FlbA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSSLMTDLGAEAAASRLADLRARAAAPHATAADCLAFGQTLLQHVGRDKASQREALVALVRAYQLDPFCAPTLLHTIAQT AFVLRDWALVDSATGLLLSHHAEDANALIWRAAAVQQRDDFGTAEALLREAVRVVPDNPVALHKLALCIKEQARFAEAEA LLRQVLALSPENAHALFDLSELEIRSGRFAEGWAHYESRVAFAGGELNNAQQALAAISAPWQGESLAGRTLVVYGEQGNG DCLWAVRFLPRLAERARREGGRVIFGHDGPLRHLFERMLPADLPLETSLETRPDFHCGLMSLPLRLGIFDATGWGAPYLS ADPALRQTWRERVEVHTAGKHGKCGNRKVGLVWNGNPDHIRDMRRSVPVGQIEPLLDVAGVSYFALSPGRGETVAQWRAK GFDIVDLTHHFQSGFDDVAALLANLDLVVTIDSGPAHLAGALGVPTCLMIDHVSAWFWGDGSPVTAWYDSIGLVRQPRVG DWTPVVAKVRERIEAVGRS
Sequences:
>Translated_499_residues MSSLMTDLGAEAAASRLADLRARAAAPHATAADCLAFGQTLLQHVGRDKASQREALVALVRAYQLDPFCAPTLLHTIAQT AFVLRDWALVDSATGLLLSHHAEDANALIWRAAAVQQRDDFGTAEALLREAVRVVPDNPVALHKLALCIKEQARFAEAEA LLRQVLALSPENAHALFDLSELEIRSGRFAEGWAHYESRVAFAGGELNNAQQALAAISAPWQGESLAGRTLVVYGEQGNG DCLWAVRFLPRLAERARREGGRVIFGHDGPLRHLFERMLPADLPLETSLETRPDFHCGLMSLPLRLGIFDATGWGAPYLS ADPALRQTWRERVEVHTAGKHGKCGNRKVGLVWNGNPDHIRDMRRSVPVGQIEPLLDVAGVSYFALSPGRGETVAQWRAK GFDIVDLTHHFQSGFDDVAALLANLDLVVTIDSGPAHLAGALGVPTCLMIDHVSAWFWGDGSPVTAWYDSIGLVRQPRVG DWTPVVAKVRERIEAVGRS >Mature_498_residues SSLMTDLGAEAAASRLADLRARAAAPHATAADCLAFGQTLLQHVGRDKASQREALVALVRAYQLDPFCAPTLLHTIAQTA FVLRDWALVDSATGLLLSHHAEDANALIWRAAAVQQRDDFGTAEALLREAVRVVPDNPVALHKLALCIKEQARFAEAEAL LRQVLALSPENAHALFDLSELEIRSGRFAEGWAHYESRVAFAGGELNNAQQALAAISAPWQGESLAGRTLVVYGEQGNGD CLWAVRFLPRLAERARREGGRVIFGHDGPLRHLFERMLPADLPLETSLETRPDFHCGLMSLPLRLGIFDATGWGAPYLSA DPALRQTWRERVEVHTAGKHGKCGNRKVGLVWNGNPDHIRDMRRSVPVGQIEPLLDVAGVSYFALSPGRGETVAQWRAKG FDIVDLTHHFQSGFDDVAALLANLDLVVTIDSGPAHLAGALGVPTCLMIDHVSAWFWGDGSPVTAWYDSIGLVRQPRVGD WTPVVAKVRERIEAVGRS
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54313; Mature: 54182
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLMTDLGAEAAASRLADLRARAAAPHATAADCLAFGQTLLQHVGRDKASQREALVALV CCCHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RAYQLDPFCAPTLLHTIAQTAFVLRDWALVDSATGLLLSHHAEDANALIWRAAAVQQRDD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC FGTAEALLREAVRVVPDNPVALHKLALCIKEQARFAEAEALLRQVLALSPENAHALFDLS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHH ELEIRSGRFAEGWAHYESRVAFAGGELNNAQQALAAISAPWQGESLAGRTLVVYGEQGNG HHHHCCCCCHHHHHHHHCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC DCLWAVRFLPRLAERARREGGRVIFGHDGPLRHLFERMLPADLPLETSLETRPDFHCGLM CEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH SLPLRLGIFDATGWGAPYLSADPALRQTWRERVEVHTAGKHGKCGNRKVGLVWNGNPDHI HCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCHHHH RDMRRSVPVGQIEPLLDVAGVSYFALSPGRGETVAQWRAKGFDIVDLTHHFQSGFDDVAA HHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCEEHHHHHHHCCHHHHHH LLANLDLVVTIDSGPAHLAGALGVPTCLMIDHVSAWFWGDGSPVTAWYDSIGLVRQPRVG HHHCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHCCCCCCCCCCC DWTPVVAKVRERIEAVGRS CCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLMTDLGAEAAASRLADLRARAAAPHATAADCLAFGQTLLQHVGRDKASQREALVALV CCHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RAYQLDPFCAPTLLHTIAQTAFVLRDWALVDSATGLLLSHHAEDANALIWRAAAVQQRDD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC FGTAEALLREAVRVVPDNPVALHKLALCIKEQARFAEAEALLRQVLALSPENAHALFDLS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHH ELEIRSGRFAEGWAHYESRVAFAGGELNNAQQALAAISAPWQGESLAGRTLVVYGEQGNG HHHHCCCCCHHHHHHHHCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC DCLWAVRFLPRLAERARREGGRVIFGHDGPLRHLFERMLPADLPLETSLETRPDFHCGLM CEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH SLPLRLGIFDATGWGAPYLSADPALRQTWRERVEVHTAGKHGKCGNRKVGLVWNGNPDHI HCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCHHHH RDMRRSVPVGQIEPLLDVAGVSYFALSPGRGETVAQWRAKGFDIVDLTHHFQSGFDDVAA HHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCEEHHHHHHHCCHHHHHH LLANLDLVVTIDSGPAHLAGALGVPTCLMIDHVSAWFWGDGSPVTAWYDSIGLVRQPRVG HHHCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHCCCCCCCCCCC DWTPVVAKVRERIEAVGRS CCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA