| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784386
Identifier: 91784386
GI number: 91784386
Start: 3357272
End: 3358561
Strand: Reverse
Name: 91784386
Synonym: Bxe_A1414
Alternate gene names: NA
Gene position: 3358561-3357272 (Counterclockwise)
Preceding gene: 91784387
Following gene: 91784379
Centisome position: 68.6
GC content: 65.19
Gene sequence:
>1290_bases ATGTCGAATCCAACACATCACGCGCGCGCCGAGGGCCATTACAGCGTGCTCGTCATCGGCGGCGGGCAGGCGGGTCTGTC GGTCAGCTATTACCTCAAGCAGGCAGGCATCGACCATCTCGTCGTCGAGAAGAACACGGTGACGCATACGTGGCGCGAGC AGCGCTGGGACGCGTTCTGTCTGGTCACGCCGAACTGGCAATGCGCGCTGCCCGGTTATCCGTATCGCGGCGACGACCCG CACGGCTTCATGAAGAAGGACGAGATCATTGCGTACCTCGACGGCTTCATCGCGCAGGTCGATGCGCCGATGATGGAGCA CACGGAAGTCAAACGCGTGAAGCAGCGCGACGACGGCGTCTACGCCATCACGACGACGCAGGGCGATTTCACCGCGGACC AGGTGGTGGTGGCCTCGGGCGGCTACCACACGCCGATCGTGCCGCGCCTCGCGGAGCGCTTGCCCGCGCGGATCGTGCAA CTGCAGTCGTCGGCATATCGGAACCCGCAGGCGCTGCCTGAAGGCGCGGTGATGGTGGTGGGCACCGGGCAATCCGGCGC GCAGATCGCGGAAGATCTGCATCTGGCCGGCCGCAAGGTGGTGCTCGCCGTGGGCGAGGCGCCGCGTTGCGCGCGCTTCT ATCGGGGCCGCGACGTGGTCGACTGGCTCGCCGACATGCAGTACTACGATATGCCGGTCGAAAAGCATCCGTTGCGCGAA GGGGTGCGCGACAACACCAACCACTATGTGACGGGCCGCGACGGCGGACGCGATATCGACCTGCGCAAGTTCGCCGCCGA GGGCATGGAGCTGTATGGCCGGCTCGACGATCTGCGCGACGGGCAGTTCCATTTTGCGCCCACGCTGGCGGCAAATCTCG ATGCCGCCGACGATACGTATAACCGGATCAACGCGAGCATCGACGGCTTCATCGCAAAGCACGGCATCGACGCGCCGGCG GGCGGCGTGTACGAACCGGTCTGGCGTCCGCAACAGGAGCGCACTACGCTCGATCTGGACGGGAGCGGCATTGCTGCGAT CATCTGGTGCATCGGTTTTACGCCGGACTTCAGCTGGCTGGATGCGCCCGTGTTCAACGGTCGCGGTTATCCGGCGCATA CGCGCGGCATTACGCCGATCGACGGTTTGTATTTCGTCGGCTTGCCGTGGCTGCATACGTGGGGCTCGGGGCGTTTTTCC GGCATCGCGCGCGATGCGGAGTTTATCGTGGATGCGATTCGCGAGAAGGCGCGGGAGCGCGCGTCGTTGGCGGCTGCGGT GGCTGCATGA
Upstream 100 bases:
>100_bases CGCAGATCGAGCGCGACGCGGCGCGCTTTCGCGACCGGCCCGACGCGACCGTCAAGGTTATCGAATTCAGCTAGGCGCTT ATTCTTTCAGAGGACGCATC
Downstream 100 bases:
>100_bases CGTAGCCGCACCCAGGCGCTCGGGTAGCCGCGTAAAAAACGGCCGCTGCGTTTTTCATGGCAGCGGCCGTTGTATTCAGC CGGAACGTTTGGCCGAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSNPTHHARAEGHYSVLVIGGGQAGLSVSYYLKQAGIDHLVVEKNTVTHTWREQRWDAFCLVTPNWQCALPGYPYRGDDP HGFMKKDEIIAYLDGFIAQVDAPMMEHTEVKRVKQRDDGVYAITTTQGDFTADQVVVASGGYHTPIVPRLAERLPARIVQ LQSSAYRNPQALPEGAVMVVGTGQSGAQIAEDLHLAGRKVVLAVGEAPRCARFYRGRDVVDWLADMQYYDMPVEKHPLRE GVRDNTNHYVTGRDGGRDIDLRKFAAEGMELYGRLDDLRDGQFHFAPTLAANLDAADDTYNRINASIDGFIAKHGIDAPA GGVYEPVWRPQQERTTLDLDGSGIAAIIWCIGFTPDFSWLDAPVFNGRGYPAHTRGITPIDGLYFVGLPWLHTWGSGRFS GIARDAEFIVDAIREKARERASLAAAVAA
Sequences:
>Translated_429_residues MSNPTHHARAEGHYSVLVIGGGQAGLSVSYYLKQAGIDHLVVEKNTVTHTWREQRWDAFCLVTPNWQCALPGYPYRGDDP HGFMKKDEIIAYLDGFIAQVDAPMMEHTEVKRVKQRDDGVYAITTTQGDFTADQVVVASGGYHTPIVPRLAERLPARIVQ LQSSAYRNPQALPEGAVMVVGTGQSGAQIAEDLHLAGRKVVLAVGEAPRCARFYRGRDVVDWLADMQYYDMPVEKHPLRE GVRDNTNHYVTGRDGGRDIDLRKFAAEGMELYGRLDDLRDGQFHFAPTLAANLDAADDTYNRINASIDGFIAKHGIDAPA GGVYEPVWRPQQERTTLDLDGSGIAAIIWCIGFTPDFSWLDAPVFNGRGYPAHTRGITPIDGLYFVGLPWLHTWGSGRFS GIARDAEFIVDAIREKARERASLAAAVAA >Mature_428_residues SNPTHHARAEGHYSVLVIGGGQAGLSVSYYLKQAGIDHLVVEKNTVTHTWREQRWDAFCLVTPNWQCALPGYPYRGDDPH GFMKKDEIIAYLDGFIAQVDAPMMEHTEVKRVKQRDDGVYAITTTQGDFTADQVVVASGGYHTPIVPRLAERLPARIVQL QSSAYRNPQALPEGAVMVVGTGQSGAQIAEDLHLAGRKVVLAVGEAPRCARFYRGRDVVDWLADMQYYDMPVEKHPLREG VRDNTNHYVTGRDGGRDIDLRKFAAEGMELYGRLDDLRDGQFHFAPTLAANLDAADDTYNRINASIDGFIAKHGIDAPAG GVYEPVWRPQQERTTLDLDGSGIAAIIWCIGFTPDFSWLDAPVFNGRGYPAHTRGITPIDGLYFVGLPWLHTWGSGRFSG IARDAEFIVDAIREKARERASLAAAVAA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 47336; Mature: 47205
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPTHHARAEGHYSVLVIGGGQAGLSVSYYLKQAGIDHLVVEKNTVTHTWREQRWDAFC CCCCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHCCCCEEEEECCCCCHHHHHCCCCEEE LVTPNWQCALPGYPYRGDDPHGFMKKDEIIAYLDGFIAQVDAPMMEHTEVKRVKQRDDGV EECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE YAITTTQGDFTADQVVVASGGYHTPIVPRLAERLPARIVQLQSSAYRNPQALPEGAVMVV EEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE GTGQSGAQIAEDLHLAGRKVVLAVGEAPRCARFYRGRDVVDWLADMQYYDMPVEKHPLRE ECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHHCCHHHCCCCCCCHHHH GVRDNTNHYVTGRDGGRDIDLRKFAAEGMELYGRLDDLRDGQFHFAPTLAANLDAADDTY CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCHH NRINASIDGFIAKHGIDAPAGGVYEPVWRPQQERTTLDLDGSGIAAIIWCIGFTPDFSWL HHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC DAPVFNGRGYPAHTRGITPIDGLYFVGLPWLHTWGSGRFSGIARDAEFIVDAIREKARER CCCEECCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH ASLAAAVAA HHHHHHHCC >Mature Secondary Structure SNPTHHARAEGHYSVLVIGGGQAGLSVSYYLKQAGIDHLVVEKNTVTHTWREQRWDAFC CCCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHCCCCEEEEECCCCCHHHHHCCCCEEE LVTPNWQCALPGYPYRGDDPHGFMKKDEIIAYLDGFIAQVDAPMMEHTEVKRVKQRDDGV EECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE YAITTTQGDFTADQVVVASGGYHTPIVPRLAERLPARIVQLQSSAYRNPQALPEGAVMVV EEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE GTGQSGAQIAEDLHLAGRKVVLAVGEAPRCARFYRGRDVVDWLADMQYYDMPVEKHPLRE ECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHHCCHHHCCCCCCCHHHH GVRDNTNHYVTGRDGGRDIDLRKFAAEGMELYGRLDDLRDGQFHFAPTLAANLDAADDTY CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCHH NRINASIDGFIAKHGIDAPAGGVYEPVWRPQQERTTLDLDGSGIAAIIWCIGFTPDFSWL HHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC DAPVFNGRGYPAHTRGITPIDGLYFVGLPWLHTWGSGRFSGIARDAEFIVDAIREKARER CCCEECCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH ASLAAAVAA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA