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The map label for this gene is nifU [H]

Identifier: 91784247

GI number: 91784247

Start: 3194428

End: 3194841

Strand: Reverse

Name: nifU [H]

Synonym: Bxe_A1554

Alternate gene names: 91784247

Gene position: 3194841-3194428 (Counterclockwise)

Preceding gene: 91784248

Following gene: 91784246

Centisome position: 65.26

GC content: 62.8

Gene sequence:

>414_bases
ATGGCTTATAGCGACAAGGTTCTGGACCACTACGAAAACCCGCGCAACGTCGGTTCCTTCGCGAAGGACGACGATGCGGT
CGGCACCGGCATGGTCGGCGCGCCGGCCTGCGGCGACGTGATGAAGCTGCAGATCCGCGTGGGCGCGGACGGCATCATCG
AGGACGCGAAGTTCAAGACGTATGGCTGCGGCTCGGCGATCGCGTCGAGCTCGCTCGTCACCGAATGGGTGAAGGGCAAG
ACGCTCGATCAGGCCATGTCGATCAAGAACACGCAGATCGCCGAAGAACTGGCACTGCCGCCGGTCAAGATCCACTGCTC
GATCCTCGCGGAAGACGCGATCAAGGCAGCGGTCGCCGACTACAAGCAACGCCACGGTGAAGCGGTCGTCGCAGACGAAA
AGCAGCACGCCTGA

Upstream 100 bases:

>100_bases
TTTCGACCATCCAGTGGGCAGCGCACTGACGCGCCGTCTGGACGAAGTCGAATTCATCGAATTGCAAATTGCAGGTTGAA
ACGGATCAAGGAGTTTAATC

Downstream 100 bases:

>100_bases
TCGGGCGGCGGGTTGCAACGCGGTTTCAGGTGAATCGAAACGGACGGCGCGAATTCAGACCAGCCGTCCGGCACGAGCTA
TATTTGATGCAGGCAGGGTA

Product: scaffold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAYSDKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGIIEDAKFKTYGCGSAIASSSLVTEWVKGK
TLDQAMSIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKQRHGEAVVADEKQHA

Sequences:

>Translated_137_residues
MAYSDKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGIIEDAKFKTYGCGSAIASSSLVTEWVKGK
TLDQAMSIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKQRHGEAVVADEKQHA
>Mature_136_residues
AYSDKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGIIEDAKFKTYGCGSAIASSSLVTEWVKGKT
LDQAMSIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKQRHGEAVVADEKQHA

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=123, Percent_Identity=73.1707317073171, Blast_Score=193, Evalue=3e-50,
Organism=Homo sapiens, GI24307953, Length=123, Percent_Identity=72.3577235772358, Blast_Score=190, Evalue=3e-49,
Organism=Escherichia coli, GI1788878, Length=125, Percent_Identity=81.6, Blast_Score=219, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17543474, Length=123, Percent_Identity=69.9186991869919, Blast_Score=188, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6324800, Length=129, Percent_Identity=66.6666666666667, Blast_Score=181, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6325122, Length=125, Percent_Identity=67.2, Blast_Score=179, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21355597, Length=127, Percent_Identity=70.8661417322835, Blast_Score=192, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011339
- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 14578; Mature: 14446

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSDKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGIIEDAKFKT
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
YGCGSAIASSSLVTEWVKGKTLDQAMSIKNTQIAEELALPPVKIHCSILAEDAIKAAVAD
CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YKQRHGEAVVADEKQHA
HHHHCCCEEECCCCCCC
>Mature Secondary Structure 
AYSDKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGIIEDAKFKT
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
YGCGSAIASSSLVTEWVKGKTLDQAMSIKNTQIAEELALPPVKIHCSILAEDAIKAAVAD
CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YKQRHGEAVVADEKQHA
HHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]