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The map label for this gene is virB1 [H]

Identifier: 91784050

GI number: 91784050

Start: 2973912

End: 2974565

Strand: Reverse

Name: virB1 [H]

Synonym: Bxe_A1753

Alternate gene names: 91784050

Gene position: 2974565-2973912 (Counterclockwise)

Preceding gene: 91784051

Following gene: 91784049

Centisome position: 60.76

GC content: 66.36

Gene sequence:

>654_bases
ATGTTGCCGCTCGACTTCATCGCGCTCGCGCAGCAGTGCGCGCCGCAGGTTTCGCCGTTGACGATGGCTGCAATCGTGCG
AACCGAATCGGGCTTCAACCAGTACGCGATCGGCGTTGTACATGGCCGGCTTGAGCGTCAGCCCGCAAACGAGGCCGAGG
CCGTTGCAACGGTACATGCGCTGGAGCGCGGCGGCTGGAATTTCAGCGTCGGGCTCGCGCAGGTGAACCGCTCCAACTGG
CCGGTCTATGGCCTGGGCGAGCGCAGCGCGTTCGACCCGTGCCGCAACCTGGCCGCAGGCGCCGCAATTCTCCAGGGTTG
CCTCGAGCTGGCGCGGCGGGCACACGCGCGTGCACCGGTCGATGCGCAGTTGGATCTGCTCGCAAGCCTGTCCTGTTACG
CCAGTGGCGATTTCTCGACCGGATACCGGACGGGCTATGTGCAGCGCGTGGTCGGCAACGCCAGCGCCGCGTCGGCGCCC
ACGACGTCCGTCGTCGTGCCGGCCATTGCGCCGATTCCGGTCATACCGGTCGATGCCGATATCCGCAGATCGCCGGAGTC
ATCCCGGTCGTCACTGCGCCACCCATCGAAACCGGCAGATACGTCATCCACGCAATCCGGCGTCGATCCAGACGGTAGCG
CCGTGGTGTTCTAG

Upstream 100 bases:

>100_bases
GCGCGGGCAGCACGCAGGTCACATATGACCCGTCGCAGTCCGCCTCGAGGTTCCTGCAGCAGATGGAGCAGCAGGACGGC
GCGAGTGGTGGGGGCCGGTG

Downstream 100 bases:

>100_bases
CCCGTCAGCCAGGCAGTAACGGAAAGATTCAGCGCGTAGAGGAGTCATCCATGAAATCAGGATTGCTAAATTATATGGGG
CGTGGCTATGCCAATCCGGG

Product: putative type IV secretion system protein VirB1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLPLDFIALAQQCAPQVSPLTMAAIVRTESGFNQYAIGVVHGRLERQPANEAEAVATVHALERGGWNFSVGLAQVNRSNW
PVYGLGERSAFDPCRNLAAGAAILQGCLELARRAHARAPVDAQLDLLASLSCYASGDFSTGYRTGYVQRVVGNASAASAP
TTSVVVPAIAPIPVIPVDADIRRSPESSRSSLRHPSKPADTSSTQSGVDPDGSAVVF

Sequences:

>Translated_217_residues
MLPLDFIALAQQCAPQVSPLTMAAIVRTESGFNQYAIGVVHGRLERQPANEAEAVATVHALERGGWNFSVGLAQVNRSNW
PVYGLGERSAFDPCRNLAAGAAILQGCLELARRAHARAPVDAQLDLLASLSCYASGDFSTGYRTGYVQRVVGNASAASAP
TTSVVVPAIAPIPVIPVDADIRRSPESSRSSLRHPSKPADTSSTQSGVDPDGSAVVF
>Mature_217_residues
MLPLDFIALAQQCAPQVSPLTMAAIVRTESGFNQYAIGVVHGRLERQPANEAEAVATVHALERGGWNFSVGLAQVNRSNW
PVYGLGERSAFDPCRNLAAGAAILQGCLELARRAHARAPVDAQLDLLASLSCYASGDFSTGYRTGYVQRVVGNASAASAP
TTSVVVPAIAPIPVIPVDADIRRSPESSRSSLRHPSKPADTSSTQSGVDPDGSAVVF

Specific function: The virB operon is essential for intracellular survival and is not involved in the invasion process. Constitutes a major determinant of virulence in mice [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virb1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 22753; Mature: 22753

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLDFIALAQQCAPQVSPLTMAAIVRTESGFNQYAIGVVHGRLERQPANEAEAVATVHA
CCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCHHHHHHHHHH
LERGGWNFSVGLAQVNRSNWPVYGLGERSAFDPCRNLAAGAAILQGCLELARRAHARAPV
HHHCCCEEEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAQLDLLASLSCYASGDFSTGYRTGYVQRVVGNASAASAPTTSVVVPAIAPIPVIPVDAD
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEECCCH
IRRSPESSRSSLRHPSKPADTSSTQSGVDPDGSAVVF
HHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC
>Mature Secondary Structure
MLPLDFIALAQQCAPQVSPLTMAAIVRTESGFNQYAIGVVHGRLERQPANEAEAVATVHA
CCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCHHHHHHHHHH
LERGGWNFSVGLAQVNRSNWPVYGLGERSAFDPCRNLAAGAAILQGCLELARRAHARAPV
HHHCCCEEEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAQLDLLASLSCYASGDFSTGYRTGYVQRVVGNASAASAPTTSVVVPAIAPIPVIPVDAD
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEECCCH
IRRSPESSRSSLRHPSKPADTSSTQSGVDPDGSAVVF
HHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10940027 [H]