| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784049
Identifier: 91784049
GI number: 91784049
Start: 2973520
End: 2973861
Strand: Reverse
Name: 91784049
Synonym: Bxe_A1754
Alternate gene names: NA
Gene position: 2973861-2973520 (Counterclockwise)
Preceding gene: 91784050
Following gene: 91784048
Centisome position: 60.74
GC content: 61.4
Gene sequence:
>342_bases ATGAAATCAGGATTGCTAAATTATATGGGGCGTGGCTATGCCAATCCGGGTGGTGGATGGCGCGCTCGGCTGGTAGCCCG ATGGGTGACCACGGCGGTTGTGGGACTGCTGGCTACGTCGCCCGCGTGGGCGCAGCTTTCCCAGGTCAATACGCTGCTGA CGACGATCCAGACGACGCTGCTCGGTGTCGGTGGTGTGATCTGCTCGATCTCCATCATCTGGGCCGGCTTCCGGATGATG TTTCAGCACGCCCGCTTCGGCGATATCGCGAACGTGTTCATCGGCGGGCTCTTCGTCGGCTGCGCGACCGTGATCGCCGG CATGCTGATTCCGACGAGTTGA
Upstream 100 bases:
>100_bases CATCCACGCAATCCGGCGTCGATCCAGACGGTAGCGCCGTGGTGTTCTAGCCCGTCAGCCAGGCAGTAACGGAAAGATTC AGCGCGTAGAGGAGTCATCC
Downstream 100 bases:
>100_bases TCCAGGAGCGCGAACCATGAAACCGCTCAAGGATCCCGTCTTCAAGGGTGCCACACGTCCGGCGATGATCTGGGGCGTGC CCCTCGTGGCCTTCCTGATG
Product: putative type IV secretion system protein VirB2/TraC
Products: NA
Alternate protein names: Conjugal Transfer Protein TrbC
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKSGLLNYMGRGYANPGGGWRARLVARWVTTAVVGLLATSPAWAQLSQVNTLLTTIQTTLLGVGGVICSISIIWAGFRMM FQHARFGDIANVFIGGLFVGCATVIAGMLIPTS
Sequences:
>Translated_113_residues MKSGLLNYMGRGYANPGGGWRARLVARWVTTAVVGLLATSPAWAQLSQVNTLLTTIQTTLLGVGGVICSISIIWAGFRMM FQHARFGDIANVFIGGLFVGCATVIAGMLIPTS >Mature_113_residues MKSGLLNYMGRGYANPGGGWRARLVARWVTTAVVGLLATSPAWAQLSQVNTLLTTIQTTLLGVGGVICSISIIWAGFRMM FQHARFGDIANVFIGGLFVGCATVIAGMLIPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11932; Mature: 11932
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSGLLNYMGRGYANPGGGWRARLVARWVTTAVVGLLATSPAWAQLSQVNTLLTTIQTTL CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LGVGGVICSISIIWAGFRMMFQHARFGDIANVFIGGLFVGCATVIAGMLIPTS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSGLLNYMGRGYANPGGGWRARLVARWVTTAVVGLLATSPAWAQLSQVNTLLTTIQTTL CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LGVGGVICSISIIWAGFRMMFQHARFGDIANVFIGGLFVGCATVIAGMLIPTS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA