Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91784035

Identifier: 91784035

GI number: 91784035

Start: 2957621

End: 2958634

Strand: Reverse

Name: 91784035

Synonym: Bxe_A1768

Alternate gene names: NA

Gene position: 2958634-2957621 (Counterclockwise)

Preceding gene: 91784036

Following gene: 91784033

Centisome position: 60.43

GC content: 66.67

Gene sequence:

>1014_bases
ATGCCCTATCCAAAAATCTACATCGACGCGATGCTCGTGAACTGGGGCGACCGGCTGTTTCAGGAGCCGCTGCGGCACGC
TCGAGCTGCGCGGCTCTCGCATGTTGATATCCGGGACGAAGCCGCCCGCATGCGAGCCAAGATCGCACGCACGCTCCGGC
GCACGCCCGAGGTAATGGTCAAGATCACGAACAAGGCCGCGAGCGCCCAGGGCATGGGGGCCGTGCGCCGACACCTGCGC
TACATCTCGCGCAACGGCCAGGTCGAACTGGAAGACCAGAACGGCGATCGAATCGCGGGCGTCGAGGCATTGCGTGATCT
GACGCGGGCCTGGCAGCTCGGCGGATGGGGCATCCCGGAGAGCAGCACACGTCGCGAGGTATTCAATGTCCTGCTGTCGA
TGCCGCCGGGCACGGACAGGCGGGCCGTGCGCGATGCGGCACGCGACTTTGCGGCACAGGAGTTCGGCGATGGCCGAGCG
TATGCATTTGCGGCGCACGACGATGAAGCCCATCCGCATGTGCATCTGAGCGTACAGGTTCGTGGCCCAGATGGGCGGCG
CCTGAATCCGCGGCGCAAGGATCTGCAGCGGTGGCGTGAGCACTTTGCAGAGCAACTGCGCGAGCACGGCGCCGACGCCA
ATGCGACGCCCCGGCGTGTGCGTGGCGTGACGCAGCGTTATCCGAAACCCGCTGTCGTTCACATGATCGCGCGCGGCGAG
ACGCCGGGATACTGGAAGCCGCTGCCGGCCGATACGCAGCGTGACGCAGGCTGGGTCGCGCACGGCGGGGTGTTCGCTGC
CTGGCGGGAATTGGCTTATGCGATGGCGAGATCGCGTGCGCGCGAGGATCGCTCGATGGCCGTCGAGATGGCATATTTCG
TCGGCGGCATGCCGGTGCAGCGGGACCGGCCCGTGGTGGAGCGAGTGCAGGACGCACGGTCCGAGCGGTCCGATTCGCAG
GTTCCAGACGCCAGAGATTGGCCAGACGATGTCGGACCGGGCGTGGATCGGTGA

Upstream 100 bases:

>100_bases
CGGATGCCGGACTGGGCGGATATGCGGGACCGGATCGACGCCCATCTGCGTGCCACATCGAGCGTCATTCGCGCAAACCT
TGACCGATGGAGCCGCTGAT

Downstream 100 bases:

>100_bases
CGGCAAGAGTGCAGCGTGGCTATACCTATCGTGCCGTGGATCGGTGAGTCTGGTTTTTGCAACTATTTACTGAGTGTTCG
CTTTAACCCATCCAGGCTTG

Product: putative DNA relaxase/nickase, TraS/VirD2-like

Products: NA

Alternate protein names: DNA Relaxase/Nickase TraS/VirD2-Like Protein; Type IV Secretory Pathway VirD2 Component; Nickase; DNA Relaxase/Nickase TraS/VirD2-Like; Plasmid-Related Protein; Type IV Secretory Pathway VirD2 Components; VirD2-Like Protein; Relaxase/Mobilisation Nuclease; Nickase/Relaxase; DNA Relaxase/Nickase TraS/VirD2- Like

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MPYPKIYIDAMLVNWGDRLFQEPLRHARAARLSHVDIRDEAARMRAKIARTLRRTPEVMVKITNKAASAQGMGAVRRHLR
YISRNGQVELEDQNGDRIAGVEALRDLTRAWQLGGWGIPESSTRREVFNVLLSMPPGTDRRAVRDAARDFAAQEFGDGRA
YAFAAHDDEAHPHVHLSVQVRGPDGRRLNPRRKDLQRWREHFAEQLREHGADANATPRRVRGVTQRYPKPAVVHMIARGE
TPGYWKPLPADTQRDAGWVAHGGVFAAWRELAYAMARSRAREDRSMAVEMAYFVGGMPVQRDRPVVERVQDARSERSDSQ
VPDARDWPDDVGPGVDR

Sequences:

>Translated_337_residues
MPYPKIYIDAMLVNWGDRLFQEPLRHARAARLSHVDIRDEAARMRAKIARTLRRTPEVMVKITNKAASAQGMGAVRRHLR
YISRNGQVELEDQNGDRIAGVEALRDLTRAWQLGGWGIPESSTRREVFNVLLSMPPGTDRRAVRDAARDFAAQEFGDGRA
YAFAAHDDEAHPHVHLSVQVRGPDGRRLNPRRKDLQRWREHFAEQLREHGADANATPRRVRGVTQRYPKPAVVHMIARGE
TPGYWKPLPADTQRDAGWVAHGGVFAAWRELAYAMARSRAREDRSMAVEMAYFVGGMPVQRDRPVVERVQDARSERSDSQ
VPDARDWPDDVGPGVDR
>Mature_336_residues
PYPKIYIDAMLVNWGDRLFQEPLRHARAARLSHVDIRDEAARMRAKIARTLRRTPEVMVKITNKAASAQGMGAVRRHLRY
ISRNGQVELEDQNGDRIAGVEALRDLTRAWQLGGWGIPESSTRREVFNVLLSMPPGTDRRAVRDAARDFAAQEFGDGRAY
AFAAHDDEAHPHVHLSVQVRGPDGRRLNPRRKDLQRWREHFAEQLREHGADANATPRRVRGVTQRYPKPAVVHMIARGET
PGYWKPLPADTQRDAGWVAHGGVFAAWRELAYAMARSRAREDRSMAVEMAYFVGGMPVQRDRPVVERVQDARSERSDSQV
PDARDWPDDVGPGVDR

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38283; Mature: 38151

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYPKIYIDAMLVNWGDRLFQEPLRHARAARLSHVDIRDEAARMRAKIARTLRRTPEVMV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHEE
KITNKAASAQGMGAVRRHLRYISRNGQVELEDQNGDRIAGVEALRDLTRAWQLGGWGIPE
EEHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SSTRREVFNVLLSMPPGTDRRAVRDAARDFAAQEFGDGRAYAFAAHDDEAHPHVHLSVQV
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEE
RGPDGRRLNPRRKDLQRWREHFAEQLREHGADANATPRRVRGVTQRYPKPAVVHMIARGE
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC
TPGYWKPLPADTQRDAGWVAHGGVFAAWRELAYAMARSRAREDRSMAVEMAYFVGGMPVQ
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RDRPVVERVQDARSERSDSQVPDARDWPDDVGPGVDR
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
PYPKIYIDAMLVNWGDRLFQEPLRHARAARLSHVDIRDEAARMRAKIARTLRRTPEVMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHEE
KITNKAASAQGMGAVRRHLRYISRNGQVELEDQNGDRIAGVEALRDLTRAWQLGGWGIPE
EEHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SSTRREVFNVLLSMPPGTDRRAVRDAARDFAAQEFGDGRAYAFAAHDDEAHPHVHLSVQV
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEE
RGPDGRRLNPRRKDLQRWREHFAEQLREHGADANATPRRVRGVTQRYPKPAVVHMIARGE
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC
TPGYWKPLPADTQRDAGWVAHGGVFAAWRELAYAMARSRAREDRSMAVEMAYFVGGMPVQ
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RDRPVVERVQDARSERSDSQVPDARDWPDDVGPGVDR
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA