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The map label for this gene is ybhR [H]

Identifier: 91783901

GI number: 91783901

Start: 2816895

End: 2818025

Strand: Direct

Name: ybhR [H]

Synonym: Bxe_A1910

Alternate gene names: 91783901

Gene position: 2816895-2818025 (Clockwise)

Preceding gene: 91783900

Following gene: 91783902

Centisome position: 57.54

GC content: 60.83

Gene sequence:

>1131_bases
ATGTTCGACCGTCTGCAGGTCATGTTGATGAAGGAGTTCCTCGAACTCAAGCGCGACCCGTGGGCGATATTCCGGCTGGT
CGTGCCGCTCCTGCTGCAGGTGATCATCTACGGCTACGCCGCGACTTTCACCGTCAACCACGTGAGCCTCGCCGTACTCG
ATCTGGACCATAGCCAGGCGAGCCGCAACCTCGTCTCGCATTTCGTCGCCACGGGCAAGTTCGACGTTGTCGATAACGCC
ACGACGGCCGGCGCGATCACGCATGACATCGATAGCGACAAGGCGACGATGGCGCTCGTCATTCATGCCGGATTCGCGCA
GTATCTCGGCAACGGCCAGAGCGCGCCGCTGCAGGTCGTGGTGGACGGCACCAACTCCAACACGGCGCTGATCGCGCTCG
GCTACGTCAGCCAGATCGTCGCGCAATTCCAGACGGATCAGATGGCTGACCAGTGGTCCAATTCCACGGCGCCGGCGCCG
CCCACCGTTGACGTGACGCTGCGTGAAAGACCCTGGTACAACGATACGATCGACGACCGCTGGTTCTTCATTCCAGGCGT
GGTCGGCACGCTGACGCTGATGCAGGTGGTCAGCCTCACGGCGTTTGCCGTGGTTCGTGAACGCGAGATCGGCACGCTGG
AGCAGATCATGGTCAGTCCGATCAAGCCGGTCGAATTCATTCTCGGCAAGACCGTGCCGTTCTTCCTGATCGGTCTCGGC
GACGTTGCTCTCGTCACCGCGGTCGGCATAGGGTGGTTTCGCGTGCCGTTCGTCGGCAATCCGTTCGTCATGCTGGTCGG
TGCATCGCTTTTTCTGCTCGCCGCACTCGGCCTGGGTTTGCTGCTGTCCACCTTCTCGCGCACGCAGCAACAGGCATTCG
CGCTCAATTTCTTTCTCATCAATCCGCTCTTCATTCTGTCGGGTTTTGCGTTCCCTATCGCCGCGATGCCCAAAGTGCTG
CAATGGATTACGCTCATCAACCCGCTGCGCTACTTTCTGGTCGTACTGCGCTCGGTATTCCTGAAGGGCACCGGCTTTGC
GGTGCTATGGCCGCAACTCGCGGCAATGGCGGCGCTCGGCGGGATCATGCTGACGCTGAGCGTCCTGCGTTTTCGCAAAT
CGCTCGACTGA

Upstream 100 bases:

>100_bases
TCCCGATCTCGCCATGCCGATTCTCGCTCTGGCTGTGTATGCGCTGGCCATTATCTGGATCGCCTCACGGGCGTTCCGCA
AACATCTGGACTAGCACATC

Downstream 100 bases:

>100_bases
ATCGCAGCTTCTGTGCGATGGGTTCCGGTTGTGCACGGCCTGGCGGACGATTCAGTGCTTGAGTATGCGTCAGTACGTCA
ACGCACCTGCAAACAAGTCC

Product: ABC multidrug efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MFDRLQVMLMKEFLELKRDPWAIFRLVVPLLLQVIIYGYAATFTVNHVSLAVLDLDHSQASRNLVSHFVATGKFDVVDNA
TTAGAITHDIDSDKATMALVIHAGFAQYLGNGQSAPLQVVVDGTNSNTALIALGYVSQIVAQFQTDQMADQWSNSTAPAP
PTVDVTLRERPWYNDTIDDRWFFIPGVVGTLTLMQVVSLTAFAVVREREIGTLEQIMVSPIKPVEFILGKTVPFFLIGLG
DVALVTAVGIGWFRVPFVGNPFVMLVGASLFLLAALGLGLLLSTFSRTQQQAFALNFFLINPLFILSGFAFPIAAMPKVL
QWITLINPLRYFLVVLRSVFLKGTGFAVLWPQLAAMAALGGIMLTLSVLRFRKSLD

Sequences:

>Translated_376_residues
MFDRLQVMLMKEFLELKRDPWAIFRLVVPLLLQVIIYGYAATFTVNHVSLAVLDLDHSQASRNLVSHFVATGKFDVVDNA
TTAGAITHDIDSDKATMALVIHAGFAQYLGNGQSAPLQVVVDGTNSNTALIALGYVSQIVAQFQTDQMADQWSNSTAPAP
PTVDVTLRERPWYNDTIDDRWFFIPGVVGTLTLMQVVSLTAFAVVREREIGTLEQIMVSPIKPVEFILGKTVPFFLIGLG
DVALVTAVGIGWFRVPFVGNPFVMLVGASLFLLAALGLGLLLSTFSRTQQQAFALNFFLINPLFILSGFAFPIAAMPKVL
QWITLINPLRYFLVVLRSVFLKGTGFAVLWPQLAAMAALGGIMLTLSVLRFRKSLD
>Mature_376_residues
MFDRLQVMLMKEFLELKRDPWAIFRLVVPLLLQVIIYGYAATFTVNHVSLAVLDLDHSQASRNLVSHFVATGKFDVVDNA
TTAGAITHDIDSDKATMALVIHAGFAQYLGNGQSAPLQVVVDGTNSNTALIALGYVSQIVAQFQTDQMADQWSNSTAPAP
PTVDVTLRERPWYNDTIDDRWFFIPGVVGTLTLMQVVSLTAFAVVREREIGTLEQIMVSPIKPVEFILGKTVPFFLIGLG
DVALVTAVGIGWFRVPFVGNPFVMLVGASLFLLAALGLGLLLSTFSRTQQQAFALNFFLINPLFILSGFAFPIAAMPKVL
QWITLINPLRYFLVVLRSVFLKGTGFAVLWPQLAAMAALGGIMLTLSVLRFRKSLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=365, Percent_Identity=34.2465753424658, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1787011, Length=348, Percent_Identity=32.183908045977, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI226510979, Length=369, Percent_Identity=27.6422764227642, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI48994943, Length=364, Percent_Identity=26.6483516483516, Blast_Score=129, Evalue=4e-31,
Organism=Drosophila melanogaster, GI85725260, Length=405, Percent_Identity=23.4567901234568, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725262, Length=405, Percent_Identity=23.4567901234568, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650853, Length=198, Percent_Identity=29.7979797979798, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24650855, Length=198, Percent_Identity=29.7979797979798, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41270; Mature: 41270

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRLQVMLMKEFLELKRDPWAIFRLVVPLLLQVIIYGYAATFTVNHVSLAVLDLDHSQA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH
SRNLVSHFVATGKFDVVDNATTAGAITHDIDSDKATMALVIHAGFAQYLGNGQSAPLQVV
HHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCCEEEEEEHHHHHHHHCCCCCCCEEEE
VDGTNSNTALIALGYVSQIVAQFQTDQMADQWSNSTAPAPPTVDVTLRERPWYNDTIDDR
EECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
WFFIPGVVGTLTLMQVVSLTAFAVVREREIGTLEQIMVSPIKPVEFILGKTVPFFLIGLG
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCCHHHHHCCC
DVALVTAVGIGWFRVPFVGNPFVMLVGASLFLLAALGLGLLLSTFSRTQQQAFALNFFLI
HHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NPLFILSGFAFPIAAMPKVLQWITLINPLRYFLVVLRSVFLKGTGFAVLWPQLAAMAALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GIMLTLSVLRFRKSLD
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDRLQVMLMKEFLELKRDPWAIFRLVVPLLLQVIIYGYAATFTVNHVSLAVLDLDHSQA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH
SRNLVSHFVATGKFDVVDNATTAGAITHDIDSDKATMALVIHAGFAQYLGNGQSAPLQVV
HHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCCEEEEEEHHHHHHHHCCCCCCCEEEE
VDGTNSNTALIALGYVSQIVAQFQTDQMADQWSNSTAPAPPTVDVTLRERPWYNDTIDDR
EECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
WFFIPGVVGTLTLMQVVSLTAFAVVREREIGTLEQIMVSPIKPVEFILGKTVPFFLIGLG
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCCHHHHHCCC
DVALVTAVGIGWFRVPFVGNPFVMLVGASLFLLAALGLGLLLSTFSRTQQQAFALNFFLI
HHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NPLFILSGFAFPIAAMPKVLQWITLINPLRYFLVVLRSVFLKGTGFAVLWPQLAAMAALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GIMLTLSVLRFRKSLD
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]