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The map label for this gene is ybhS [H]

Identifier: 91783900

GI number: 91783900

Start: 2815752

End: 2816888

Strand: Direct

Name: ybhS [H]

Synonym: Bxe_A1911

Alternate gene names: 91783900

Gene position: 2815752-2816888 (Clockwise)

Preceding gene: 91783899

Following gene: 91783901

Centisome position: 57.51

GC content: 63.15

Gene sequence:

>1137_bases
ATGAGCCTGCGGCGTCTGCTGGCAATGGCATTCAAGGAAACGCTGCAGATCTGGCGCGATCCGCGCAGTCTCGCCATCGC
GCTGCTGATGCCGCTGCTGCAGATGGTGCTGCTCGGCTACGGCGTCAGCCTCGACATCCGGCGAGTGCCGCTGTGCATCA
ACGACGAGGAGCACAGTCAGCTCAGCCGCGAACTGGTGCAGGACTTCGTGTCGTCGCACTGGTTTTCCGCGGTTCGGAAC
GTGGACAACGAGCGTGCGCTGCGCGATGCGATGGATCGCGGCACGTGTGCCGGCGTCGTCACCATTCCGGTCAATTTTTC
GCGTGTCTTCACCACGACGGGTACGGCCTCGGTGCAAACCGTGTTCGATGCGACCGACGCCAATACGACCAACATTGCGA
TCGGGTACGCGCAGAACGTCGTCGCGCGAATCACGGCCGCGTTCCAGACGCGCTGGCAGCAGTCCCACGGCATACCGGCA
CAGACCGTGGGAGCGGTCGATCTCGAACCGCGTGTCTGGTTCAACGAGACGCTCGACAGCCGCAATTTCATCATTCCGGG
CGTCGTCGCGGTCATTCTCGCGCTGGTCGGCGCGCAGCTCACGTCGCTGACCATCTCGCGCGAGTGGGAACGCGGCACGA
TGGAGCAACTCATTTCCACGCCGGTCACCGCACTCGAAGTGATGCTCGGCAAGCTGCTGCCGTACTTCGTGATCGGGCTC
ATCAACGCGGCATTCTGTCTGCTGAGCACGGTGTACTGGTTTCACGTGCCGTTGCGCGGCAGCGTGGGCACGCTGATCGC
CACGACCGCGCTGTTTACGCTCGTCGTGCTCGGCATCGGCTATCTGGTGTCGGTGCATATCCGCAGCCAGCTCGGCGCGA
GCCAGGTGGCACTGCTGCTGACCATGCTGCCGACCAGCATGCTGTCGGGCTACACGTTCGCCATCGACCAGATGCCCGCG
CCGATTCAGGTCGCCACGCTGCTCGTCTACGCCCGCTACTACATCACGATCCTGCGGGCCGTGTTCCTGAAAGGCAGCAC
CATTCCCGATCTCGCCATGCCGATTCTCGCTCTGGCTGTGTATGCGCTGGCCATTATCTGGATCGCCTCACGGGCGTTCC
GCAAACATCTGGACTAG

Upstream 100 bases:

>100_bases
CCCGGCATATCGAGGTGACGAGCGTGCGCGCCATCCGCGCCAGCCTCGAAGACGTGTTCGTCCAGCTGGTCACCCACGCG
GACAAGGGAGTGCACTCAAC

Downstream 100 bases:

>100_bases
CACATCATGTTCGACCGTCTGCAGGTCATGTTGATGAAGGAGTTCCTCGAACTCAAGCGCGACCCGTGGGCGATATTCCG
GCTGGTCGTGCCGCTCCTGC

Product: ABC multidrug efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSLRRLLAMAFKETLQIWRDPRSLAIALLMPLLQMVLLGYGVSLDIRRVPLCINDEEHSQLSRELVQDFVSSHWFSAVRN
VDNERALRDAMDRGTCAGVVTIPVNFSRVFTTTGTASVQTVFDATDANTTNIAIGYAQNVVARITAAFQTRWQQSHGIPA
QTVGAVDLEPRVWFNETLDSRNFIIPGVVAVILALVGAQLTSLTISREWERGTMEQLISTPVTALEVMLGKLLPYFVIGL
INAAFCLLSTVYWFHVPLRGSVGTLIATTALFTLVVLGIGYLVSVHIRSQLGASQVALLLTMLPTSMLSGYTFAIDQMPA
PIQVATLLVYARYYITILRAVFLKGSTIPDLAMPILALAVYALAIIWIASRAFRKHLD

Sequences:

>Translated_378_residues
MSLRRLLAMAFKETLQIWRDPRSLAIALLMPLLQMVLLGYGVSLDIRRVPLCINDEEHSQLSRELVQDFVSSHWFSAVRN
VDNERALRDAMDRGTCAGVVTIPVNFSRVFTTTGTASVQTVFDATDANTTNIAIGYAQNVVARITAAFQTRWQQSHGIPA
QTVGAVDLEPRVWFNETLDSRNFIIPGVVAVILALVGAQLTSLTISREWERGTMEQLISTPVTALEVMLGKLLPYFVIGL
INAAFCLLSTVYWFHVPLRGSVGTLIATTALFTLVVLGIGYLVSVHIRSQLGASQVALLLTMLPTSMLSGYTFAIDQMPA
PIQVATLLVYARYYITILRAVFLKGSTIPDLAMPILALAVYALAIIWIASRAFRKHLD
>Mature_377_residues
SLRRLLAMAFKETLQIWRDPRSLAIALLMPLLQMVLLGYGVSLDIRRVPLCINDEEHSQLSRELVQDFVSSHWFSAVRNV
DNERALRDAMDRGTCAGVVTIPVNFSRVFTTTGTASVQTVFDATDANTTNIAIGYAQNVVARITAAFQTRWQQSHGIPAQ
TVGAVDLEPRVWFNETLDSRNFIIPGVVAVILALVGAQLTSLTISREWERGTMEQLISTPVTALEVMLGKLLPYFVIGLI
NAAFCLLSTVYWFHVPLRGSVGTLIATTALFTLVVLGIGYLVSVHIRSQLGASQVALLLTMLPTSMLSGYTFAIDQMPAP
IQVATLLVYARYYITILRAVFLKGSTIPDLAMPILALAVYALAIIWIASRAFRKHLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=383, Percent_Identity=37.3368146214099, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1787010, Length=346, Percent_Identity=27.4566473988439, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI48994943, Length=354, Percent_Identity=26.8361581920904, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI226510979, Length=333, Percent_Identity=28.2282282282282, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41640; Mature: 41509

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRRLLAMAFKETLQIWRDPRSLAIALLMPLLQMVLLGYGVSLDIRRVPLCINDEEHSQ
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCHHHHH
LSRELVQDFVSSHWFSAVRNVDNERALRDAMDRGTCAGVVTIPVNFSRVFTTTGTASVQT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCHHHH
VFDATDANTTNIAIGYAQNVVARITAAFQTRWQQSHGIPAQTVGAVDLEPRVWFNETLDS
EEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHCCCC
RNFIIPGVVAVILALVGAQLTSLTISREWERGTMEQLISTPVTALEVMLGKLLPYFVIGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
INAAFCLLSTVYWFHVPLRGSVGTLIATTALFTLVVLGIGYLVSVHIRSQLGASQVALLL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TMLPTSMLSGYTFAIDQMPAPIQVATLLVYARYYITILRAVFLKGSTIPDLAMPILALAV
HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YALAIIWIASRAFRKHLD
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLRRLLAMAFKETLQIWRDPRSLAIALLMPLLQMVLLGYGVSLDIRRVPLCINDEEHSQ
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCHHHHH
LSRELVQDFVSSHWFSAVRNVDNERALRDAMDRGTCAGVVTIPVNFSRVFTTTGTASVQT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCHHHH
VFDATDANTTNIAIGYAQNVVARITAAFQTRWQQSHGIPAQTVGAVDLEPRVWFNETLDS
EEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHCCCC
RNFIIPGVVAVILALVGAQLTSLTISREWERGTMEQLISTPVTALEVMLGKLLPYFVIGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
INAAFCLLSTVYWFHVPLRGSVGTLIATTALFTLVVLGIGYLVSVHIRSQLGASQVALLL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TMLPTSMLSGYTFAIDQMPAPIQVATLLVYARYYITILRAVFLKGSTIPDLAMPILALAV
HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YALAIIWIASRAFRKHLD
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]