Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yugF [H]

Identifier: 91783856

GI number: 91783856

Start: 2772419

End: 2773438

Strand: Direct

Name: yugF [H]

Synonym: Bxe_A1955

Alternate gene names: 91783856

Gene position: 2772419-2773438 (Clockwise)

Preceding gene: 91783855

Following gene: 91783857

Centisome position: 56.63

GC content: 63.53

Gene sequence:

>1020_bases
ATGGCAAGCATCGACTCCACCACGCCCGCCTCGACCACCGCGCTGCCGCCGCGCTCGCTCGCCGCGCGCCTCGGCATCAC
CAGCGTGACGCGCGACGAATTGCGGCAGCGTTATACGCAAAGCGGCTCCAGGTTCGTGAAGATCATGGGCGCCGACGTGC
ACTATGTCGACGAAGGCAGCGGCGACATCATCGTGATGATCCACGGTTTCGCCTCTTCGCTGCATACGTGGAATCGCGTC
GCCGATGAGCTCAAGCGCGAGCACCGCGTGATCCGCCTCGATCTGCCGCCGTTCGGCGTGACAGGACCGCTGCGCTCCAG
CAGCGGCGCAATCGAAACGATGGACCTGCCCACCTATCGGCGCTTCATCGACACGTTCATGCAGGCACTCGGCATCTCGC
GCGCAACCTTGATCGGCAACTCGCTCGGCGGGCTGATTTCGTGGGACTATGCGGCGCGCCATCGCGACGCCGTTGAGCGG
CTCGTGTTGATCGACTCGGCCGGCTTTCCGATGAAGCTGCCGATTTACATCGGCCTGTTCAATAGCGCGCTGGTGCGGGT
GAGTTCGCCCTGGTGGCTGCCTGAGGCCATCGTCAAAAGCGCGGTGCGCAACGTCTATGGCGATCCGCGCAAGATCGACG
CGGTGACGCTGCGCCGCTACGTCGAGTTCTTTCACGGCGAAGGGACGCGCGCCGCGATCGGCAAGATGGTGCCGACGCTC
GATTTCAGGCAAGTCGACACGAACGTGCTGAAAACATTCGATGTGCCGGCGCTGGTGCTATGGGGTGCGAAGGATCGCTG
GATTCCGACGGCGCACGCCGCCGAATTCGCAAGCCGCATTCCGGGTGCGAAATCGGTCATGTATGCCGGATTAGGCCACA
TTCCAATGGAAGAAGCGCCCGAACGCGTCATGGTCGATCTGCGCGCGTTTCTCGGCATCAGGCCGGCGCACTCAGCCGCC
GCCGAGCAGGCGCAACAGCCCCCACAGAAATTTGCAGAGCATCACGATCAGCTCCCATAG

Upstream 100 bases:

>100_bases
CACGCCCTGACCACATGAGCGGTGGCGGTTGAACCGGGAGAGAGACGCCGCCGATGCAATCCGATTCGAAGCCAATCGAA
CTAAAAGGGAGACAACAATC

Downstream 100 bases:

>100_bases
ATGGTAGAGCTGTTGCCAGCCCGAAACGCGCGCGAAGGAGTCGATCATGGATTCCGGCAGGAGAAGGTAAGGTCTGCGGT
GACGCGGTCAATCGGGATTG

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MASIDSTTPASTTALPPRSLAARLGITSVTRDELRQRYTQSGSRFVKIMGADVHYVDEGSGDIIVMIHGFASSLHTWNRV
ADELKREHRVIRLDLPPFGVTGPLRSSSGAIETMDLPTYRRFIDTFMQALGISRATLIGNSLGGLISWDYAARHRDAVER
LVLIDSAGFPMKLPIYIGLFNSALVRVSSPWWLPEAIVKSAVRNVYGDPRKIDAVTLRRYVEFFHGEGTRAAIGKMVPTL
DFRQVDTNVLKTFDVPALVLWGAKDRWIPTAHAAEFASRIPGAKSVMYAGLGHIPMEEAPERVMVDLRAFLGIRPAHSAA
AEQAQQPPQKFAEHHDQLP

Sequences:

>Translated_339_residues
MASIDSTTPASTTALPPRSLAARLGITSVTRDELRQRYTQSGSRFVKIMGADVHYVDEGSGDIIVMIHGFASSLHTWNRV
ADELKREHRVIRLDLPPFGVTGPLRSSSGAIETMDLPTYRRFIDTFMQALGISRATLIGNSLGGLISWDYAARHRDAVER
LVLIDSAGFPMKLPIYIGLFNSALVRVSSPWWLPEAIVKSAVRNVYGDPRKIDAVTLRRYVEFFHGEGTRAAIGKMVPTL
DFRQVDTNVLKTFDVPALVLWGAKDRWIPTAHAAEFASRIPGAKSVMYAGLGHIPMEEAPERVMVDLRAFLGIRPAHSAA
AEQAQQPPQKFAEHHDQLP
>Mature_338_residues
ASIDSTTPASTTALPPRSLAARLGITSVTRDELRQRYTQSGSRFVKIMGADVHYVDEGSGDIIVMIHGFASSLHTWNRVA
DELKREHRVIRLDLPPFGVTGPLRSSSGAIETMDLPTYRRFIDTFMQALGISRATLIGNSLGGLISWDYAARHRDAVERL
VLIDSAGFPMKLPIYIGLFNSALVRVSSPWWLPEAIVKSAVRNVYGDPRKIDAVTLRRYVEFFHGEGTRAAIGKMVPTLD
FRQVDTNVLKTFDVPALVLWGAKDRWIPTAHAAEFASRIPGAKSVMYAGLGHIPMEEAPERVMVDLRAFLGIRPAHSAAA
EQAQQPPQKFAEHHDQLP

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17562298, Length=289, Percent_Identity=22.1453287197232, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 37492; Mature: 37360

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIDSTTPASTTALPPRSLAARLGITSVTRDELRQRYTQSGSRFVKIMGADVHYVDEGS
CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCC
GDIIVMIHGFASSLHTWNRVADELKREHRVIRLDLPPFGVTGPLRSSSGAIETMDLPTYR
CCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHH
RFIDTFMQALGISRATLIGNSLGGLISWDYAARHRDAVERLVLIDSAGFPMKLPIYIGLF
HHHHHHHHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHEEEEECCCCCEECCEEEEEH
NSALVRVSSPWWLPEAIVKSAVRNVYGDPRKIDAVTLRRYVEFFHGEGTRAAIGKMVPTL
HHHHEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
DFRQVDTNVLKTFDVPALVLWGAKDRWIPTAHAAEFASRIPGAKSVMYAGLGHIPMEEAP
CHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH
ERVMVDLRAFLGIRPAHSAAAEQAQQPPQKFAEHHDQLP
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure 
ASIDSTTPASTTALPPRSLAARLGITSVTRDELRQRYTQSGSRFVKIMGADVHYVDEGS
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCC
GDIIVMIHGFASSLHTWNRVADELKREHRVIRLDLPPFGVTGPLRSSSGAIETMDLPTYR
CCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHH
RFIDTFMQALGISRATLIGNSLGGLISWDYAARHRDAVERLVLIDSAGFPMKLPIYIGLF
HHHHHHHHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHEEEEECCCCCEECCEEEEEH
NSALVRVSSPWWLPEAIVKSAVRNVYGDPRKIDAVTLRRYVEFFHGEGTRAAIGKMVPTL
HHHHEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
DFRQVDTNVLKTFDVPALVLWGAKDRWIPTAHAAEFASRIPGAKSVMYAGLGHIPMEEAP
CHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH
ERVMVDLRAFLGIRPAHSAAAEQAQQPPQKFAEHHDQLP
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]