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The map label for this gene is rhsD [C]

Identifier: 91783848

GI number: 91783848

Start: 2759137

End: 2761482

Strand: Reverse

Name: rhsD [C]

Synonym: Bxe_A1963

Alternate gene names: 91783848

Gene position: 2761482-2759137 (Counterclockwise)

Preceding gene: 91783849

Following gene: 91783847

Centisome position: 56.4

GC content: 56.22

Gene sequence:

>2346_bases
ATGAAAAGACACAGACTGTATGGAGATGCGTCCGGATTTTCGGGCCGCCTAATGGCTGCGTTCATGTTGCTGATACTTGC
GTTCAGCGCAAATGCAGACGACTGCTTCTCACTGTACGCGAAGTCCGGCGCCACGCCGGGCTCCAAGACCTGCAAGCTCG
ACGTTACGAGCAACACGCCGGGTGGTATGGGCAACTACGCGTGTATTAATGACCTCGTGCAGATTGATCAGTGGTGTAAT
TCAACCGGCACTCCGCCGGACGATACCTGCCCGGTGGCTGACCCGGTGTTTCCCGCGAACGGGATTGTGACTCTCTCTGA
AACTGATTTTGCAAGCGGCGACACGTCGCCGCTTGTGTTCAGTCGTAGCTACCTGTCCAAGCCGTTCGATAAAGTGCAGA
CAGCGATGGGCGGGTACTGGGCAAGTAACTGGCAGCGACGGCTTGATCTGACCTCGGTCAATGCAAGTACGCCGAAAATC
ACCGCGTATCGGAGTAACGGCCAGCCTCTGATCTTCAAGTGGGTTAACGGCGGGTGGGCGGTGCCGGGTACGTCGGGTCT
TTCTCTCTTGAAAGCTGGCGACGGATACTTCTACCTGAAGGACGAACGGCTTGGCACGACCGAAACATACTCCGTCAGCA
CAGGTCTGTTTCACTCCGAGACAACACGCACGGGTATGTATCGTGAAGTTGAATACGTTGGACAACAGATAGATTCGATC
GCGCAGTGGCCCGTTGATCGGATCGGGCAGACGGCATCGCGGCTGACACTTAGTCTGACATATGACAGTAATGGTCGCGT
TGTGAGTGTAGTGCCGCCTTCGGGCAACGCGACACATTATGCGTACGATGCGAAAGGCAATCTTGTTTCAGTAACCGCGC
CGATTGGATACGTTCGTCAGTACCTTTATGAGGATGCCCGCTTCCCCAATGCGATGACCGGGATAAAGGACGAATCCGGT
TCACGGATTGCAACATGGACCTACGATTCCAGCGGACGCGCAATCTCAGTCACCCATCCGGACACGACGCGTAACGTTTC
TTTCAGTTATGGCGCGAACACGACCACTGTTAGCAATATGTCCGGCAACAGCACGTATTCTTTTAATGTTGGAGACACGT
CGCGTCCTGGCTCAATTGTTACGCCTGGCGGCGCGGTCTCACGTACATGGGATACATCAGGGAACCTGAAGCAGACAATT
ACACCGGATGGGAATACACAGTACACGTGGGACGGCGCCAACCGGCCGACGAAAGCAGTTGCGACAGTCTCTGGCAACAG
GACGGTAACGACGATCGAGTATAGCGACAGTACCTCGTTGCGTCCGCATCTGGTCGCCACGCCGGGTAAAATCCGCGCGT
TTGTCTATGACCAGGGCGGTAACGTCACTGGCTACGCCGAGACGGAGACGACCGATCTGACGGGCGAACAGGGGATGCAA
GCCGTTGGGACCGGTAACCAGTGGACAGTTGGTGCAAGCTACGATTCGGCGAGCCGCCTTCTGTCGGCTGTCATCACACG
TAATGGCTCGAAGCGTGAAGACTGGACCTACACATACGATGTACGGGGCAATGTCGAGTCAGTGCAGGATGCCGTATCTG
GCTGGTCGATGCGAACGCTCTCGCGCAATGCTGAGAATCGTGCAACGCAGATAGCTGGAAACAGCGGTCAGGCGAGCATC
GGGTACGATGAGCGCGGTCGCGTAAAGTCCTTTCAGTATAGCGAACCGGCAAGTTCGTTAAATGGTGGACTTGCCCGTGT
ACTGGCAGTCGATTACCGGTATGGTCCAGACGGTACGGTGTCCTCGTACACTGCTCAGGTGTCGACGAACGGCGCCTGGT
GGCAGCCGATCAGCGATGCCGAACTGGGAGTGTGGCTCACCAACTGGGAACTGGGAAATGATCCGGTTGCACCCCCGGCG
AGCCTCACCGGCCTGCAATCCAATGGCAGAGCCTTCGTTCCAGAAATCTGCGTTGAATGCTACATGGCCTGGAAGGCGTT
GCCGACAGGTAAGCTATTCGGCCAGGAATTGGGCGAAACACTGCCGGCATGGCGCGAAACCACCGAGTTGATGCTGAGCG
ATCAGGCGCAGGTTCCATATCCTTCGCTCGTGCCCGATCTGACGAGTTCTGCGAAGCGGTCAACGCTTTACAGCAGCCTG
TTCAAGGGGGGGGATGGTGGATTCGCTAAATGCGGCGGTAGAGAAGCTCACGAGGCCGAATGCTATGCTCAGTATGAAAA
CGACAGAGACGAATGCCGTCTCCTGGCCGGACCAAGAGGGAAGCGAAACTGGGCCCTATGCTTGGCGAACGCTTTTGACA
GATATCAACAATGCAGGGGGTATTGA

Upstream 100 bases:

>100_bases
TCGAGCGTAATTTTAAGAATTGTCGGATTTTCTGGTCATCGTGATCCCTATAGGGTGCTTGTGCGTCATACAAGTACAAA
GCAAGCCAATAGGGATAAAA

Downstream 100 bases:

>100_bases
TGCTTAAACGTCCGCCGTATTCAATGGTTGTGACCTACGTCGAAAATCCACAACAGTTGATCATGCAAATTGTTGAGTCA
GCCAGGGTGGCTCCGCTTCT

Product: YD repeat-containing protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; Rhs Family Protein; YD Repeat Protein; Core Protein; RHS-Related Protein; RhsD Protein; RHS Repeat Family; Rhs-Like Protein; RHS-Related Transmembrane Protein; Yd Repeat Protein; Rhs Family Protein-Like Protein; Hypothethical Protein RHS_repeat; Secreted Protein

Number of amino acids: Translated: 781; Mature: 781

Protein sequence:

>781_residues
MKRHRLYGDASGFSGRLMAAFMLLILAFSANADDCFSLYAKSGATPGSKTCKLDVTSNTPGGMGNYACINDLVQIDQWCN
STGTPPDDTCPVADPVFPANGIVTLSETDFASGDTSPLVFSRSYLSKPFDKVQTAMGGYWASNWQRRLDLTSVNASTPKI
TAYRSNGQPLIFKWVNGGWAVPGTSGLSLLKAGDGYFYLKDERLGTTETYSVSTGLFHSETTRTGMYREVEYVGQQIDSI
AQWPVDRIGQTASRLTLSLTYDSNGRVVSVVPPSGNATHYAYDAKGNLVSVTAPIGYVRQYLYEDARFPNAMTGIKDESG
SRIATWTYDSSGRAISVTHPDTTRNVSFSYGANTTTVSNMSGNSTYSFNVGDTSRPGSIVTPGGAVSRTWDTSGNLKQTI
TPDGNTQYTWDGANRPTKAVATVSGNRTVTTIEYSDSTSLRPHLVATPGKIRAFVYDQGGNVTGYAETETTDLTGEQGMQ
AVGTGNQWTVGASYDSASRLLSAVITRNGSKREDWTYTYDVRGNVESVQDAVSGWSMRTLSRNAENRATQIAGNSGQASI
GYDERGRVKSFQYSEPASSLNGGLARVLAVDYRYGPDGTVSSYTAQVSTNGAWWQPISDAELGVWLTNWELGNDPVAPPA
SLTGLQSNGRAFVPEICVECYMAWKALPTGKLFGQELGETLPAWRETTELMLSDQAQVPYPSLVPDLTSSAKRSTLYSSL
FKGGDGGFAKCGGREAHEAECYAQYENDRDECRLLAGPRGKRNWALCLANAFDRYQQCRGY

Sequences:

>Translated_781_residues
MKRHRLYGDASGFSGRLMAAFMLLILAFSANADDCFSLYAKSGATPGSKTCKLDVTSNTPGGMGNYACINDLVQIDQWCN
STGTPPDDTCPVADPVFPANGIVTLSETDFASGDTSPLVFSRSYLSKPFDKVQTAMGGYWASNWQRRLDLTSVNASTPKI
TAYRSNGQPLIFKWVNGGWAVPGTSGLSLLKAGDGYFYLKDERLGTTETYSVSTGLFHSETTRTGMYREVEYVGQQIDSI
AQWPVDRIGQTASRLTLSLTYDSNGRVVSVVPPSGNATHYAYDAKGNLVSVTAPIGYVRQYLYEDARFPNAMTGIKDESG
SRIATWTYDSSGRAISVTHPDTTRNVSFSYGANTTTVSNMSGNSTYSFNVGDTSRPGSIVTPGGAVSRTWDTSGNLKQTI
TPDGNTQYTWDGANRPTKAVATVSGNRTVTTIEYSDSTSLRPHLVATPGKIRAFVYDQGGNVTGYAETETTDLTGEQGMQ
AVGTGNQWTVGASYDSASRLLSAVITRNGSKREDWTYTYDVRGNVESVQDAVSGWSMRTLSRNAENRATQIAGNSGQASI
GYDERGRVKSFQYSEPASSLNGGLARVLAVDYRYGPDGTVSSYTAQVSTNGAWWQPISDAELGVWLTNWELGNDPVAPPA
SLTGLQSNGRAFVPEICVECYMAWKALPTGKLFGQELGETLPAWRETTELMLSDQAQVPYPSLVPDLTSSAKRSTLYSSL
FKGGDGGFAKCGGREAHEAECYAQYENDRDECRLLAGPRGKRNWALCLANAFDRYQQCRGY
>Mature_781_residues
MKRHRLYGDASGFSGRLMAAFMLLILAFSANADDCFSLYAKSGATPGSKTCKLDVTSNTPGGMGNYACINDLVQIDQWCN
STGTPPDDTCPVADPVFPANGIVTLSETDFASGDTSPLVFSRSYLSKPFDKVQTAMGGYWASNWQRRLDLTSVNASTPKI
TAYRSNGQPLIFKWVNGGWAVPGTSGLSLLKAGDGYFYLKDERLGTTETYSVSTGLFHSETTRTGMYREVEYVGQQIDSI
AQWPVDRIGQTASRLTLSLTYDSNGRVVSVVPPSGNATHYAYDAKGNLVSVTAPIGYVRQYLYEDARFPNAMTGIKDESG
SRIATWTYDSSGRAISVTHPDTTRNVSFSYGANTTTVSNMSGNSTYSFNVGDTSRPGSIVTPGGAVSRTWDTSGNLKQTI
TPDGNTQYTWDGANRPTKAVATVSGNRTVTTIEYSDSTSLRPHLVATPGKIRAFVYDQGGNVTGYAETETTDLTGEQGMQ
AVGTGNQWTVGASYDSASRLLSAVITRNGSKREDWTYTYDVRGNVESVQDAVSGWSMRTLSRNAENRATQIAGNSGQASI
GYDERGRVKSFQYSEPASSLNGGLARVLAVDYRYGPDGTVSSYTAQVSTNGAWWQPISDAELGVWLTNWELGNDPVAPPA
SLTGLQSNGRAFVPEICVECYMAWKALPTGKLFGQELGETLPAWRETTELMLSDQAQVPYPSLVPDLTSSAKRSTLYSSL
FKGGDGGFAKCGGREAHEAECYAQYENDRDECRLLAGPRGKRNWALCLANAFDRYQQCRGY

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84533; Mature: 84533

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHRLYGDASGFSGRLMAAFMLLILAFSANADDCFSLYAKSGATPGSKTCKLDVTSNTP
CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC
GGMGNYACINDLVQIDQWCNSTGTPPDDTCPVADPVFPANGIVTLSETDFASGDTSPLVF
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEE
SRSYLSKPFDKVQTAMGGYWASNWQRRLDLTSVNASTPKITAYRSNGQPLIFKWVNGGWA
EHHHHCCCHHHHHHHHCCHHHCCHHHEEEEEECCCCCCEEEEEECCCCEEEEEEECCCEE
VPGTSGLSLLKAGDGYFYLKDERLGTTETYSVSTGLFHSETTRTGMYREVEYVGQQIDSI
CCCCCCCEEEECCCCEEEEECCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHH
AQWPVDRIGQTASRLTLSLTYDSNGRVVSVVPPSGNATHYAYDAKGNLVSVTAPIGYVRQ
HHCCHHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHH
YLYEDARFPNAMTGIKDESGSRIATWTYDSSGRAISVTHPDTTRNVSFSYGANTTTVSNM
HHHHHHCCCCHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCEEEECC
SGNSTYSFNVGDTSRPGSIVTPGGAVSRTWDTSGNLKQTITPDGNTQYTWDGANRPTKAV
CCCCEEEEECCCCCCCCCEECCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCEEE
ATVSGNRTVTTIEYSDSTSLRPHLVATPGKIRAFVYDQGGNVTGYAETETTDLTGEQGMQ
EEECCCEEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHCCE
AVGTGNQWTVGASYDSASRLLSAVITRNGSKREDWTYTYDVRGNVESVQDAVSGWSMRTL
EECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEHH
SRNAENRATQIAGNSGQASIGYDERGRVKSFQYSEPASSLNGGLARVLAVDYRYGPDGTV
HCCCCCHHEEEECCCCCEECCCCCCCCEECEECCCCHHHHCCCEEEEEEEEEEECCCCCC
SSYTAQVSTNGAWWQPISDAELGVWLTNWELGNDPVAPPASLTGLQSNGRAFVPEICVEC
CEEEEEEECCCCEECCCCCCCEEEEEEEEECCCCCCCCCCHHCCCCCCCCEEHHHHHHHH
YMAWKALPTGKLFGQELGETLPAWRETTELMLSDQAQVPYPSLVPDLTSSAKRSTLYSSL
HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FKGGDGGFAKCGGREAHEAECYAQYENDRDECRLLAGPRGKRNWALCLANAFDRYQQCRG
HCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCC
Y
C
>Mature Secondary Structure
MKRHRLYGDASGFSGRLMAAFMLLILAFSANADDCFSLYAKSGATPGSKTCKLDVTSNTP
CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC
GGMGNYACINDLVQIDQWCNSTGTPPDDTCPVADPVFPANGIVTLSETDFASGDTSPLVF
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEE
SRSYLSKPFDKVQTAMGGYWASNWQRRLDLTSVNASTPKITAYRSNGQPLIFKWVNGGWA
EHHHHCCCHHHHHHHHCCHHHCCHHHEEEEEECCCCCCEEEEEECCCCEEEEEEECCCEE
VPGTSGLSLLKAGDGYFYLKDERLGTTETYSVSTGLFHSETTRTGMYREVEYVGQQIDSI
CCCCCCCEEEECCCCEEEEECCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHH
AQWPVDRIGQTASRLTLSLTYDSNGRVVSVVPPSGNATHYAYDAKGNLVSVTAPIGYVRQ
HHCCHHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHH
YLYEDARFPNAMTGIKDESGSRIATWTYDSSGRAISVTHPDTTRNVSFSYGANTTTVSNM
HHHHHHCCCCHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCEEEECC
SGNSTYSFNVGDTSRPGSIVTPGGAVSRTWDTSGNLKQTITPDGNTQYTWDGANRPTKAV
CCCCEEEEECCCCCCCCCEECCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCEEE
ATVSGNRTVTTIEYSDSTSLRPHLVATPGKIRAFVYDQGGNVTGYAETETTDLTGEQGMQ
EEECCCEEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHCCE
AVGTGNQWTVGASYDSASRLLSAVITRNGSKREDWTYTYDVRGNVESVQDAVSGWSMRTL
EECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEHH
SRNAENRATQIAGNSGQASIGYDERGRVKSFQYSEPASSLNGGLARVLAVDYRYGPDGTV
HCCCCCHHEEEECCCCCEECCCCCCCCEECEECCCCHHHHCCCEEEEEEEEEEECCCCCC
SSYTAQVSTNGAWWQPISDAELGVWLTNWELGNDPVAPPASLTGLQSNGRAFVPEICVEC
CEEEEEEECCCCEECCCCCCCEEEEEEEEECCCCCCCCCCHHCCCCCCCCEEHHHHHHHH
YMAWKALPTGKLFGQELGETLPAWRETTELMLSDQAQVPYPSLVPDLTSSAKRSTLYSSL
HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FKGGDGGFAKCGGREAHEAECYAQYENDRDECRLLAGPRGKRNWALCLANAFDRYQQCRG
HCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA