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The map label for this gene is tcp [H]

Identifier: 91783810

GI number: 91783810

Start: 2716189

End: 2717994

Strand: Reverse

Name: tcp [H]

Synonym: Bxe_A2002

Alternate gene names: 91783810

Gene position: 2717994-2716189 (Counterclockwise)

Preceding gene: 91783811

Following gene: 91783809

Centisome position: 55.52

GC content: 67.66

Gene sequence:

>1806_bases
ATGTTGAACAAGGGCATTACGATCAAGGCGCGGATAGGCCTCACGATGGCTTTTCTCGCCGCGTTGCTGGTGGCCATCGG
CGTGTTCGGACTGTTCGGCATGAGCCGTTCGAACCACGCCTTAAGCGACACTTTCACCAACGCCATGCCGAGCGCGGTCG
ACATCGGCAATGCCGAACTTTACGCGGCGCGTGAGCGGCTGGCGCTCGACCGCGCAGCGTTCATGATAGGCACGCCGGAA
GCCGCGCCGACGCTCGAGCGAGCGCGTGGCATGCGCGCCACGTCGGACATGTGGTGGAAACAGTACATGGATCTGCCGCG
CGAGCCGGACGAGGACCGCCTCGCGCAGGACGTCGTGTCCAGACGCGAAGCACTGCATCAGCAACTGGACGCCTTTGCGG
CGACCATCGCCGCGAACGATCAGGCGAAGCTGGTGGACGGCGCCAAGCGCCTGCAAGTCGCCTACAACGACCTCGCCAAT
GCCGACGACGCCTTGCGCAAATACCAGTTCACATCGGCGAAAGAGGGCTACGACGCGGCGGAAAGCAGCTTCGAACTGTT
CCGCCTGATCAGTGGCGGCGCGCTGCTGATCGGCGTGCTGGCCGCGGCGATCTCGTACCTGGCGCTCAGCCGCGCGATCG
CCCGGCCGCTCGACGCGGCGCTCGGCTATTTCGACGCGATCTCAGCGGGCGATCTGCGCCGGCCGGTCATCGTGACCTCG
CGCGATGAAATGGGGCGACTGCTCGAAGGGATCGCCAGGATGCAGCGCAGCCTCACCGACACGGTGCGTAGCGTGCGCAG
CGGCAGCGAATCGATTGCGACCGCCACCCGTCAGATCGCCGCCGGCAATATCGACCTGTCCTCGCGCACCGAAGAGCAGG
CTTCGGCGCTGCAGCAAACCGCCTCCAGCATGGAAGAGCTCACCGGCACGGTCAGGCAGAACGCCGACAACGCCCGCCAG
GCGAGTTCGCTGGCGGCCAACGCGTCGGAGATCGCCAACAAGGGCAGCGCGGTGGTCGACAAGGTGGTCGGCACGATGGG
CGACATCAACCAGAGCTCGGCCCGGATCGCCGACATTATTTCGATCATCGAAGGGATTGCGTTCCAGACCAACATCCTCG
CCCTGAACGCGGCGGTGGAAGCGGCGCGCGCCGGCGAAGACGGGCGCGGTTTCGCGGTCGTGGCGGGCGAAGTGCGCAGC
CTCGCGCAGCGTTCGTCGGCTGCGGCGAAGGAAATCAAGGAACTGATCGATACCTCGGTCGAGCGCGTGCAGTCGGGCTC
GGCCCTGGTCGACGAAGCCGGTCGCACCATGACCGATATCATCGGCGCGGTGCAGCGTGTGACCGACATCATGGGCGAAA
TCGCCGCGGCTTCGGAAGAACAGAGCGGCGGCATCGATCAGGTGGCGCGCGCCGTCACGCAGATGGACGAAGTCACCCAG
CAAAATGCCGCGCTGGTCGAAGAAGCGGCGGCCGCGGCGTCGTCGCTCGAAGATCAGGCCGGCAAGCTGCGGCACGCGGT
CGCCGTGTTCCAGCTGGAAGAAACCGGTTACGCGGCGCCGCCGAGCGCCGCGCCGAAGCGCGCGCCCGCGCCCGCGCCGC
AGCGCGCCGTGGTAGCCCGGAAGGGGGCGCGTACCGCCGCCGCGCATTCCGCGCCGCAAGGCGCAACTGCAACCGCGTCC
GCGCCCGTAGCCGTAACGAAAGCGCCAGCCGCGACGCCGCAGCCCGCCGCCGCGCCGGCACGCATGCCCGCCAAAGCCAT
CGCGACGGCCGACGCCGGCAGCGACCACGATTGGGAAACGTTCTGA

Upstream 100 bases:

>100_bases
GTTATTAGAGCGCCGCCTCAAATGAGCGCCGACACGCAGCAACCACACGCTTTTCCACGCTGCGCACGCAACTCTCATTT
TTCAAGCACAGGAACCACGC

Downstream 100 bases:

>100_bases
GCGGGAGTGCCGCTGAAATTTTTTCGCAACATTCATTCCCGCCGCGCGGATGGATCCCAGTAACTGGGTAATCTGCCGGC
GCCGTGGCTACGTTGCTCAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVDIGNAELYAARERLALDRAAFMIGTPE
AAPTLERARGMRATSDMWWKQYMDLPREPDEDRLAQDVVSRREALHQQLDAFAATIAANDQAKLVDGAKRLQVAYNDLAN
ADDALRKYQFTSAKEGYDAAESSFELFRLISGGALLIGVLAAAISYLALSRAIARPLDAALGYFDAISAGDLRRPVIVTS
RDEMGRLLEGIARMQRSLTDTVRSVRSGSESIATATRQIAAGNIDLSSRTEEQASALQQTASSMEELTGTVRQNADNARQ
ASSLAANASEIANKGSAVVDKVVGTMGDINQSSARIADIISIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRS
LAQRSSAAAKEIKELIDTSVERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMDEVTQ
QNAALVEEAAAAASSLEDQAGKLRHAVAVFQLEETGYAAPPSAAPKRAPAPAPQRAVVARKGARTAAAHSAPQGATATAS
APVAVTKAPAATPQPAAAPARMPAKAIATADAGSDHDWETF

Sequences:

>Translated_601_residues
MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVDIGNAELYAARERLALDRAAFMIGTPE
AAPTLERARGMRATSDMWWKQYMDLPREPDEDRLAQDVVSRREALHQQLDAFAATIAANDQAKLVDGAKRLQVAYNDLAN
ADDALRKYQFTSAKEGYDAAESSFELFRLISGGALLIGVLAAAISYLALSRAIARPLDAALGYFDAISAGDLRRPVIVTS
RDEMGRLLEGIARMQRSLTDTVRSVRSGSESIATATRQIAAGNIDLSSRTEEQASALQQTASSMEELTGTVRQNADNARQ
ASSLAANASEIANKGSAVVDKVVGTMGDINQSSARIADIISIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRS
LAQRSSAAAKEIKELIDTSVERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMDEVTQ
QNAALVEEAAAAASSLEDQAGKLRHAVAVFQLEETGYAAPPSAAPKRAPAPAPQRAVVARKGARTAAAHSAPQGATATAS
APVAVTKAPAATPQPAAAPARMPAKAIATADAGSDHDWETF
>Mature_601_residues
MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVDIGNAELYAARERLALDRAAFMIGTPE
AAPTLERARGMRATSDMWWKQYMDLPREPDEDRLAQDVVSRREALHQQLDAFAATIAANDQAKLVDGAKRLQVAYNDLAN
ADDALRKYQFTSAKEGYDAAESSFELFRLISGGALLIGVLAAAISYLALSRAIARPLDAALGYFDAISAGDLRRPVIVTS
RDEMGRLLEGIARMQRSLTDTVRSVRSGSESIATATRQIAAGNIDLSSRTEEQASALQQTASSMEELTGTVRQNADNARQ
ASSLAANASEIANKGSAVVDKVVGTMGDINQSSARIADIISIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRS
LAQRSSAAAKEIKELIDTSVERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMDEVTQ
QNAALVEEAAAAASSLEDQAGKLRHAVAVFQLEETGYAAPPSAAPKRAPAPAPQRAVVARKGARTAAAHSAPQGATATAS
APVAVTKAPAATPQPAAAPARMPAKAIATADAGSDHDWETF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=330, Percent_Identity=60.3030303030303, Blast_Score=350, Evalue=1e-97,
Organism=Escherichia coli, GI1788194, Length=344, Percent_Identity=56.9767441860465, Blast_Score=341, Evalue=7e-95,
Organism=Escherichia coli, GI2367378, Length=451, Percent_Identity=48.5587583148559, Blast_Score=331, Evalue=9e-92,
Organism=Escherichia coli, GI1787690, Length=374, Percent_Identity=51.8716577540107, Blast_Score=327, Evalue=2e-90,
Organism=Escherichia coli, GI1789453, Length=323, Percent_Identity=40.5572755417957, Blast_Score=214, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62900; Mature: 62900

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVDIGNAEL
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCCHHH
YAARERLALDRAAFMIGTPEAAPTLERARGMRATSDMWWKQYMDLPREPDEDRLAQDVVS
HHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
RREALHQQLDAFAATIAANDQAKLVDGAKRLQVAYNDLANADDALRKYQFTSAKEGYDAA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHH
ESSFELFRLISGGALLIGVLAAAISYLALSRAIARPLDAALGYFDAISAGDLRRPVIVTS
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
RDEMGRLLEGIARMQRSLTDTVRSVRSGSESIATATRQIAAGNIDLSSRTEEQASALQQT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ASSMEELTGTVRQNADNARQASSLAANASEIANKGSAVVDKVVGTMGDINQSSARIADII
HHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
SIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRSLAQRSSAAAKEIKELIDTSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMDEVTQ
HHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QNAALVEEAAAAASSLEDQAGKLRHAVAVFQLEETGYAAPPSAAPKRAPAPAPQRAVVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
KGARTAAAHSAPQGATATASAPVAVTKAPAATPQPAAAPARMPAKAIATADAGSDHDWET
CCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
F
C
>Mature Secondary Structure
MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVDIGNAEL
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCCHHH
YAARERLALDRAAFMIGTPEAAPTLERARGMRATSDMWWKQYMDLPREPDEDRLAQDVVS
HHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
RREALHQQLDAFAATIAANDQAKLVDGAKRLQVAYNDLANADDALRKYQFTSAKEGYDAA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHH
ESSFELFRLISGGALLIGVLAAAISYLALSRAIARPLDAALGYFDAISAGDLRRPVIVTS
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
RDEMGRLLEGIARMQRSLTDTVRSVRSGSESIATATRQIAAGNIDLSSRTEEQASALQQT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ASSMEELTGTVRQNADNARQASSLAANASEIANKGSAVVDKVVGTMGDINQSSARIADII
HHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
SIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRSLAQRSSAAAKEIKELIDTSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMDEVTQ
HHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QNAALVEEAAAAASSLEDQAGKLRHAVAVFQLEETGYAAPPSAAPKRAPAPAPQRAVVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
KGARTAAAHSAPQGATATASAPVAVTKAPAATPQPAAAPARMPAKAIATADAGSDHDWET
CCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]