| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is mhpD [C]
Identifier: 91783809
GI number: 91783809
Start: 2715013
End: 2715774
Strand: Reverse
Name: mhpD [C]
Synonym: Bxe_A2003
Alternate gene names: 91783809
Gene position: 2715774-2715013 (Counterclockwise)
Preceding gene: 91783810
Following gene: 91783807
Centisome position: 55.47
GC content: 68.37
Gene sequence:
>762_bases ATGACGCCTCACGACCTCGCGCACCGCCTCGTCGAAGCACGCCGGCAGCATCGCCCGATCGATGTGCCCGCCCCCGACAG CCTGCCGCCCGATGCGGCAACCGCGTACGCGATCCAGCAGGCGGTCATCGCCGGTCTCGGCGAATCGACCGGCGGCTGGA AGATCGGCGCCAAAGTGCCCGGCGGCGCCGCCGCGGGCGCGCCGATTCCGGGCTCGCTGGTGCTGCCGTCGCCGGCGCGC ATCGCGCACGACAGCTTCTTCCGGGTGCTGGTGGAACTGGAGATCGCATTCCGCTTCGCGGAGGCGATCGAGCCCCGCGG CCGCGCCTATGCGCGCGACGAGGTGCTGGCCAAAGTCGGCGTCGTGCTGCCGGCCATCGAGATCGTCGACAGCCGATTCA CCGAGTGGCCGAACGTCGCGCCGCTTGCGCAGCTGGCCGACGCGCAAAACAACGGCGCGTTGATTACGGGCCATCCGGTC GCGTACGCGGGCCTGGCGCGTGGCTTCGACTTCGTTTCACCCGAACTGGAGCTGAGTTTCGACGGCGATTCGCTAATCCC GGAAGCCACGGGCAATCCGGCGGGCGACCCGCGCGAATTGCTGGTGTGGTTCGTCAACCATTGCGCCGCGATGGGCATCA CCATCGAGCCGGAATGGACGCTCACCACCGGTTCGTACGTCGGCGCTCACCGGCTGCACAAAGCGGGCATCGTGCGCGGA CATATCGACGGCCTCGGAGAAGTGGAAATCGAACTGACCTGA
Upstream 100 bases:
>100_bases CGGGCGTGGTTTCGCCGCCTTCGAGCGCTGCCACACATGGCCATCCATTCACCAGCACGCCATACTCAACCGCTCAATGC GCCAGCCCCAAAGGACCGAC
Downstream 100 bases:
>100_bases GACGTCGCGCTTGTAACAGCGCATTACGGAATTTCACTCGAACGGCTGCCTGCGGGCAGCCGTTTTACATTCATCGCATC CGTGACGGCGCCGCTGCCGT
Product: putative hydratase/decarboxylase
Products: H2O; 2-oxopent-4-enoate [C]
Alternate protein names: 2-Keto-4-Pentenoate Hydratase-Like Protein; 2-Keto-4-Pentenoate Hydratase; 2-Keto-4-Pentenoate Hydratase-Like; Hydratase; 2-Oxopent-4-Enoate Hydratase; Hydratase/Decarboxylase Family Protein; Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTPHDLAHRLVEARRQHRPIDVPAPDSLPPDAATAYAIQQAVIAGLGESTGGWKIGAKVPGGAAAGAPIPGSLVLPSPAR IAHDSFFRVLVELEIAFRFAEAIEPRGRAYARDEVLAKVGVVLPAIEIVDSRFTEWPNVAPLAQLADAQNNGALITGHPV AYAGLARGFDFVSPELELSFDGDSLIPEATGNPAGDPRELLVWFVNHCAAMGITIEPEWTLTTGSYVGAHRLHKAGIVRG HIDGLGEVEIELT
Sequences:
>Translated_253_residues MTPHDLAHRLVEARRQHRPIDVPAPDSLPPDAATAYAIQQAVIAGLGESTGGWKIGAKVPGGAAAGAPIPGSLVLPSPAR IAHDSFFRVLVELEIAFRFAEAIEPRGRAYARDEVLAKVGVVLPAIEIVDSRFTEWPNVAPLAQLADAQNNGALITGHPV AYAGLARGFDFVSPELELSFDGDSLIPEATGNPAGDPRELLVWFVNHCAAMGITIEPEWTLTTGSYVGAHRLHKAGIVRG HIDGLGEVEIELT >Mature_252_residues TPHDLAHRLVEARRQHRPIDVPAPDSLPPDAATAYAIQQAVIAGLGESTGGWKIGAKVPGGAAAGAPIPGSLVLPSPARI AHDSFFRVLVELEIAFRFAEAIEPRGRAYARDEVLAKVGVVLPAIEIVDSRFTEWPNVAPLAQLADAQNNGALITGHPVA YAGLARGFDFVSPELELSFDGDSLIPEATGNPAGDPRELLVWFVNHCAAMGITIEPEWTLTTGSYVGAHRLHKAGIVRGH IDGLGEVEIELT
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.- [C]
Molecular weight: Translated: 26815; Mature: 26684
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHDLAHRLVEARRQHRPIDVPAPDSLPPDAATAYAIQQAVIAGLGESTGGWKIGAKVP CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC GGAAAGAPIPGSLVLPSPARIAHDSFFRVLVELEIAFRFAEAIEPRGRAYARDEVLAKVG CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VVLPAIEIVDSRFTEWPNVAPLAQLADAQNNGALITGHPVAYAGLARGFDFVSPELELSF HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCEEEEE DGDSLIPEATGNPAGDPRELLVWFVNHCAAMGITIEPEWTLTTGSYVGAHRLHKAGIVRG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHHHHCEEEE HIDGLGEVEIELT CCCCCCEEEEEEC >Mature Secondary Structure TPHDLAHRLVEARRQHRPIDVPAPDSLPPDAATAYAIQQAVIAGLGESTGGWKIGAKVP CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC GGAAAGAPIPGSLVLPSPARIAHDSFFRVLVELEIAFRFAEAIEPRGRAYARDEVLAKVG CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VVLPAIEIVDSRFTEWPNVAPLAQLADAQNNGALITGHPVAYAGLARGFDFVSPELELSF HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCEEEEE DGDSLIPEATGNPAGDPRELLVWFVNHCAAMGITIEPEWTLTTGSYVGAHRLHKAGIVRG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHHHHCEEEE HIDGLGEVEIELT CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxy-2-ketovalerate [C]
Specific reaction: 4-hydroxy-2-ketovalerate = H2O + 2-oxopent-4-enoate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA