| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783800
Identifier: 91783800
GI number: 91783800
Start: 2704004
End: 2705035
Strand: Reverse
Name: 91783800
Synonym: Bxe_A2012
Alternate gene names: NA
Gene position: 2705035-2704004 (Counterclockwise)
Preceding gene: 91783804
Following gene: 91783799
Centisome position: 55.25
GC content: 61.82
Gene sequence:
>1032_bases ATGCGCATTTCGCATCTTCTCTCCCGCCTTGCGGTGTCCGCGCGTTCATTCGCAACGCGCAGCGCCGCTGCGGCCACGCT GGCCGGCGCCGTAGCGGTCGCGTTGATTGCGCCGCCGGCTCATGCCGACGACCACGTCAGCTTGCTGACCAGCTGGTACG CGCAAGCCGAACACGGCGGTTTCTATCAGGCAGTCGCGACCGGCATCTACAAGAAATATGGGCTCGACGTAACCATCCGG ATGGGCGGTCCGCAAGTCAATGGCATGCAGTTGCTTGCCGGCGGTCAGGCGGACTTTCTGCTCGGCTACGACTTTCAGGT GCTGTCGGGCGTGGAAGCCGGTATTCCCGTCACCACGGTGGCTGCCGCGTTCCAGTACGACCCGCAAGGCATGATGACCC ACGCCGACGTGACCAGTCTCGCCGGTCTGAAGAACAAGACGATCCTCGTCGCCGGTTCGGGCCGCACGACGTGGTGGCCG TGGCTGAAGGCGAAGTATGGCTATACCGAAGCGCAAGCACGCCCGTACACCTTCAACCTGCAACCGTTCTTCGCCGATCC GAACGTTGCAATGCAGGCGTATCCGTCGTCTGAAACGTTCCAGGCCGAACAGGCTCATGCGAACGCGCACTTCTTCCTGT TCGCCGACGACGGCTATCCGCCGTACAACACCACGATCGTCACGATGCGCGACACCGTGAAAAACAGGCCGGACGTAGTG GCGCGTTTCGTGAAGGCGTCGATGGAAGGGTGGAAGAGCTATCTGAACGATCCCGCGCCGGGCAATGCACTGATCAAGAA AGACAACCCGCAGATGAGCGACGCGCAGCTCGCCTACGGCGTCGCGCAGTTGAAGAAGCTCAAGCTCGTGACCGGCGGCG ATGCAGCTACGCAGGGCATCGGCACGATGACCGACGCGCGCTGGAAAAAGACCTTCGACTACATGGTCGACGCCAGGCTG CTGAAACCCGCCACCGACTATCACGCGGCCTACACGCTGCAATTCATTCAGAACGCGAAGGTGATGCCTTGA
Upstream 100 bases:
>100_bases TTGCGCGCAGCGCAGCAGTCACATCGCCCGTTCCCTGCACGGCATTCAGCCTTGCCTTCTCACGTTCCCAACCTTCCCCA CGTTCACACGGAGTTCAGTC
Downstream 100 bases:
>100_bases GGACGGTTCTCGACGCGGACACTTCACATCATCTGCATACCTGAACGTCTGAACGCACCGAACAAGGAGTATTACATGCT GGTCACCCGTCAAAACGTCC
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; NMT1/THI5 Like Family; Histidine Kinase; NMT1/THI5 Like Domain-Containing Protein; ABC Transporter Periplasmic; Diguanylate Cyclase; GGDEF Domain-Containing Protein; Permease Protein Of ABC Transporter; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Two-Component Sensor Histidine Kinase; ABC Transporter Periplasmic Components; Twin-Arginine Translocation Pathway Signal; NMT1/THI5-Like Protein; PAS Sensor Protein; Diguanylate Cyclase/Phosphodiesterase; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; ABC Transporter Permease; Signal Transduction Response Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Periplasmic-Component Of ABC Transporter; Sensory Box Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate ABC Transporter; Sensory Transduction Histidine Kinase; NMT1/THI5-Ike Domain-Containing Protein; Lipoprotein; Exported Protein; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRISHLLSRLAVSARSFATRSAAAATLAGAVAVALIAPPAHADDHVSLLTSWYAQAEHGGFYQAVATGIYKKYGLDVTIR MGGPQVNGMQLLAGGQADFLLGYDFQVLSGVEAGIPVTTVAAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRTTWWP WLKAKYGYTEAQARPYTFNLQPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFADDGYPPYNTTIVTMRDTVKNRPDVV ARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQLAYGVAQLKKLKLVTGGDAATQGIGTMTDARWKKTFDYMVDARL LKPATDYHAAYTLQFIQNAKVMP
Sequences:
>Translated_343_residues MRISHLLSRLAVSARSFATRSAAAATLAGAVAVALIAPPAHADDHVSLLTSWYAQAEHGGFYQAVATGIYKKYGLDVTIR MGGPQVNGMQLLAGGQADFLLGYDFQVLSGVEAGIPVTTVAAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRTTWWP WLKAKYGYTEAQARPYTFNLQPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFADDGYPPYNTTIVTMRDTVKNRPDVV ARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQLAYGVAQLKKLKLVTGGDAATQGIGTMTDARWKKTFDYMVDARL LKPATDYHAAYTLQFIQNAKVMP >Mature_343_residues MRISHLLSRLAVSARSFATRSAAAATLAGAVAVALIAPPAHADDHVSLLTSWYAQAEHGGFYQAVATGIYKKYGLDVTIR MGGPQVNGMQLLAGGQADFLLGYDFQVLSGVEAGIPVTTVAAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRTTWWP WLKAKYGYTEAQARPYTFNLQPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFADDGYPPYNTTIVTMRDTVKNRPDVV ARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQLAYGVAQLKKLKLVTGGDAATQGIGTMTDARWKKTFDYMVDARL LKPATDYHAAYTLQFIQNAKVMP
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37250; Mature: 37250
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISHLLSRLAVSARSFATRSAAAATLAGAVAVALIAPPAHADDHVSLLTSWYAQAEHGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCC FYQAVATGIYKKYGLDVTIRMGGPQVNGMQLLAGGQADFLLGYDFQVLSGVEAGIPVTTV HHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCEEEECCHHHHCCCCCCCCHHHH AAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRTTWWPWLKAKYGYTEAQARPYTFNL HHHEEECCCCCEEECCHHHHCCCCCCEEEEECCCCCEECCCHHEECCCCCCCCCCEEEEC QPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFADDGYPPYNTTIVTMRDTVKNRPDVV CEEECCCCCEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHCCCHHHH ARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQLAYGVAQLKKLKLVTGGDAATQGI HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEECCCHHHCCC GTMTDARWKKTFDYMVDARLLKPATDYHAAYTLQFIQNAKVMP CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEHHCCCCCC >Mature Secondary Structure MRISHLLSRLAVSARSFATRSAAAATLAGAVAVALIAPPAHADDHVSLLTSWYAQAEHGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCC FYQAVATGIYKKYGLDVTIRMGGPQVNGMQLLAGGQADFLLGYDFQVLSGVEAGIPVTTV HHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCEEEECCHHHHCCCCCCCCHHHH AAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRTTWWPWLKAKYGYTEAQARPYTFNL HHHEEECCCCCEEECCHHHHCCCCCCEEEEECCCCCEECCCHHEECCCCCCCCCCEEEEC QPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFADDGYPPYNTTIVTMRDTVKNRPDVV CEEECCCCCEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHCCCHHHH ARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQLAYGVAQLKKLKLVTGGDAATQGI HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEECCCHHHCCC GTMTDARWKKTFDYMVDARLLKPATDYHAAYTLQFIQNAKVMP CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA