Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ycaP [C]

Identifier: 91783782

GI number: 91783782

Start: 2683312

End: 2683806

Strand: Reverse

Name: ycaP [C]

Synonym: Bxe_A2030

Alternate gene names: 91783782

Gene position: 2683806-2683312 (Counterclockwise)

Preceding gene: 91783783

Following gene: 91783779

Centisome position: 54.82

GC content: 65.05

Gene sequence:

>495_bases
ATGATGGACACAATCTCCTTGCTGTTCGGTCAGGGCAGGACGCTCGACCCGCTCCAGATGGGCCTACGCTCGATCGTCGT
GTTCCTTGTCGCGCTGGTGCTGATCCGCATTTCGGGCCGGCGCTCCTTCGGGCAGCGCTCGCCATTCGATTCGGTGGTGG
TGATCCTGCTCGGCGCGACGCTGAGCCGGGCCATTGTCGGTGCGTCGCCGTTTGTCGCGACGGTGGTGGCGTCGTTCGTG
ATCGTCGCGTGCCATCGGTTGCTGGCGTGGGCATGCATGCGCTCGCCCGCGCTGGAGCGGCTGGTGGGCGGCGTCGAGCG
CGAGGTGTTCAGCAACGGCGCGTTCAATGCGCGCGAAATGGACGCGGCCCTCATCACACCGACCGATGTGCAGGAAAGCG
TGCGCCAGAAAACCGGCTCACGTTCGATGGATCACGTCGCCGCGGCCATTCTCGAACGCAATGGCGAAGTGAGCGTGATC
CGCAAGAAGCGCTGA

Upstream 100 bases:

>100_bases
CGGGCGGAGGAAAGCGCATGAAAGCGTGAGCGCGCCGCGCCGCAAAAACCGTTTCGGCCGCGCACCATCAAAGACGGCTG
CACGCCGCGAGGAGGGCGGC

Downstream 100 bases:

>100_bases
AGCCGGCCGACAGTGACGGCGACGGCAGCGACCGGTGCGCCCGCTCAGCCGCGGCCGCCGCGCGAGATTTCCTCGCCCGC
GCGATGCGGCATGCGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGATLSRAIVGASPFVATVVASFV
IVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREMDAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVI
RKKR

Sequences:

>Translated_164_residues
MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGATLSRAIVGASPFVATVVASFV
IVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREMDAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVI
RKKR
>Mature_164_residues
MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGATLSRAIVGASPFVATVVASFV
IVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREMDAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVI
RKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17796; Mature: 17796

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGAT
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LSRAIVGASPFVATVVASFVIVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREM
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHC
DAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVIRKKR
CHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGAT
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LSRAIVGASPFVATVVASFVIVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREM
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHC
DAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVIRKKR
CHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA