| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91783701
Identifier: 91783701
GI number: 91783701
Start: 2595933
End: 2596688
Strand: Reverse
Name: 91783701
Synonym: Bxe_A2113
Alternate gene names: NA
Gene position: 2596688-2595933 (Counterclockwise)
Preceding gene: 91783704
Following gene: 91783700
Centisome position: 53.04
GC content: 66.8
Gene sequence:
>756_bases ATGCCGATGATCTCTTCGTTTGCGATGCGCGCGGGTGTGGTCGCCGTGACTTTCGTTGTCGCCGGCTTCGTCAAGGGCGT GACCGGCATGGGACTGCCGACGGTCGCGATGGGCGTGCTCGGCACGCTGATGCTGCCGGCGCAGGCCGCCGCCATGCTGC TGTTGCCGTCCTTCATCACGAACGTCTGGCAACTGGTGGCGGGGCCGAGCGTGCGGATGCTCGTCAGACGTTTGTGGCCG ATGATGCTGGGCATCGTCGCCGGCACGGTGGGGGCCGCGTCGTTCATTGCGGGGGGCGGCGGCGAGTGGGCCGTGGTCGG TCTCGGTGCCGCGCTGACGCTCTATGCGGTGGCCGGTTTGCTGGCATGGCGCTTCTCGGTGCCGGCGCGGCATGAGCGCT GGTTGTCGCCGGCGATCGGCGCGGTGACGGGTGTCGTCACCGGCGGCACCGGCGTGTTTGTCGTGCCGGCCGTACCCTAT CTGCAAGGGTTGGCGTTGAAGAAAGAGGATCTGGTGCAGGCGCTCGGGCTTTCGTTCACGGTGTCCACCATCGCGCTCGC GATCGGGCTTGCCAGAGAGCACGCGTTTGCGCCCGGCGATCTGGGCGAGTCGTTCTTCGCCGTGGTCCCGGCACTGTTCG GCATGTGGCTCGGACAGCGCGTGCGCGGACGTATCGGCGCGCAGACCTTCAGGCGCTGGTTCTTTATCTGTCTGCTCGGA CTGGGCATTCAATTGATGGCGCGCGCATTCGTTTAA
Upstream 100 bases:
>100_bases GGGCGCGTGCCTTAGCCCCAGCCTAAGTCACGGTAAGTATCTTACGCATTGTGGCCGGCCTTGCGGCGATTGAGAATTGC CGCATCACTTCAATAACGAC
Downstream 100 bases:
>100_bases TCAAACAGTGGTGAAAGCGAACGTGGAAGGAGCGATATTGTGTGGCCCACTATTCTCGATACGCTCGGCGCGCTGGCGGT GCTGGCCAGTGTCGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPMISSFAMRAGVVAVTFVVAGFVKGVTGMGLPTVAMGVLGTLMLPAQAAAMLLLPSFITNVWQLVAGPSVRMLVRRLWP MMLGIVAGTVGAASFIAGGGGEWAVVGLGAALTLYAVAGLLAWRFSVPARHERWLSPAIGAVTGVVTGGTGVFVVPAVPY LQGLALKKEDLVQALGLSFTVSTIALAIGLAREHAFAPGDLGESFFAVVPALFGMWLGQRVRGRIGAQTFRRWFFICLLG LGIQLMARAFV
Sequences:
>Translated_251_residues MPMISSFAMRAGVVAVTFVVAGFVKGVTGMGLPTVAMGVLGTLMLPAQAAAMLLLPSFITNVWQLVAGPSVRMLVRRLWP MMLGIVAGTVGAASFIAGGGGEWAVVGLGAALTLYAVAGLLAWRFSVPARHERWLSPAIGAVTGVVTGGTGVFVVPAVPY LQGLALKKEDLVQALGLSFTVSTIALAIGLAREHAFAPGDLGESFFAVVPALFGMWLGQRVRGRIGAQTFRRWFFICLLG LGIQLMARAFV >Mature_250_residues PMISSFAMRAGVVAVTFVVAGFVKGVTGMGLPTVAMGVLGTLMLPAQAAAMLLLPSFITNVWQLVAGPSVRMLVRRLWPM MLGIVAGTVGAASFIAGGGGEWAVVGLGAALTLYAVAGLLAWRFSVPARHERWLSPAIGAVTGVVTGGTGVFVVPAVPYL QGLALKKEDLVQALGLSFTVSTIALAIGLAREHAFAPGDLGESFFAVVPALFGMWLGQRVRGRIGAQTFRRWFFICLLGL GIQLMARAFV
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26187; Mature: 26056
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMISSFAMRAGVVAVTFVVAGFVKGVTGMGLPTVAMGVLGTLMLPAQAAAMLLLPSFIT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVWQLVAGPSVRMLVRRLWPMMLGIVAGTVGAASFIAGGGGEWAVVGLGAALTLYAVAGL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH LAWRFSVPARHERWLSPAIGAVTGVVTGGTGVFVVPAVPYLQGLALKKEDLVQALGLSFT HHHHHCCCHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHH VSTIALAIGLAREHAFAPGDLGESFFAVVPALFGMWLGQRVRGRIGAQTFRRWFFICLLG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIQLMARAFV HHHHHHHHHCC >Mature Secondary Structure PMISSFAMRAGVVAVTFVVAGFVKGVTGMGLPTVAMGVLGTLMLPAQAAAMLLLPSFIT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVWQLVAGPSVRMLVRRLWPMMLGIVAGTVGAASFIAGGGGEWAVVGLGAALTLYAVAGL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH LAWRFSVPARHERWLSPAIGAVTGVVTGGTGVFVVPAVPYLQGLALKKEDLVQALGLSFT HHHHHCCCHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHH VSTIALAIGLAREHAFAPGDLGESFFAVVPALFGMWLGQRVRGRIGAQTFRRWFFICLLG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIQLMARAFV HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA