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The map label for this gene is ybiU [H]

Identifier: 91783623

GI number: 91783623

Start: 2496063

End: 2497307

Strand: Direct

Name: ybiU [H]

Synonym: Bxe_A2192

Alternate gene names: 91783623

Gene position: 2496063-2497307 (Clockwise)

Preceding gene: 91783621

Following gene: 91783624

Centisome position: 50.98

GC content: 61.37

Gene sequence:

>1245_bases
ATGGCGTTGAAAATCGACGACTTGCCAGGCGCAATCCGGCAAGCAAAAAAGGAGTTGCGCGCGGCCTTGCCGAACTACCG
GGAAGTGTTCGCCGAAGTCGAAGCGGCGATCATCGCCGAGGCAAAGCGAATTGCCGCCCAGCGGGATCGTGGAGAAGACG
TCATTCCCGAGATCCAGTTTTCAGACATAACCGCACAACGCGTCACGCCGGACCAGATCGCGCTCGTTAAAGCGCGGGGC
GCATGCGTCATTCGTCAGGTGTTTCCGCGCGCACTCGTGCAGGGTTGGGACCAGGACATTGCCCGCTATGTCGAGACCAA
TAACCTCGACAAACACCTCGAAAACCGCGCCGAGGACAAATACTTCGGCCAGTTGGCCTCCAGCAAGCCGCAGATCTATG
GCGTGTACTGGTCGAAGCCGCAAGTGCTGGCCCGTCAGTCGGAATCGCTGACCGCCGCGCGCGTGTTCCTCAACAAACTG
TGGCGCAATGAGAGCGACGGGCGCGTCCATTTCGATCCGGAGCATGTGCCTGTCTATGCCGACCGTTTGCGTCGCCGGCC
GCCGGGCTCGGCGTCGCTCGGCTTGTCCGCGCATTGCGACGGCGGGTCGGTCGAGCGCTGGATCGAGAGCAATTTCCGCA
AGGTGTACCGCCACGTGTTTGCCGGCAATTGGCGCCACTACGATGCGTTCGATGCGGCGTTCCGGACCGATGTCGAGGAG
ATCGCTTCGCCGGCGGTCTGTTCGATGTTCCGCACCTTTCAGGGCTGGACCGCCTTGACGCCGCAAGGCCCCGGCGACGG
TACGCTGCAACTCGTCCCCATTGCCAATTCGATGGTGTATATCCTGCTGCGCGCGCTTCAGGACGATGTCGCGGAAGACG
ATCTGTGCGGGGCGATGCCCGGACGCGCGCTCTCGATCAAGCCGGAATTTCATGCGCCGCTGTTCGAGGCGTTGTCGTCG
ATTCCCGGAATGGAAGCGGGCGACACCGTGTTCTGGCACAGCGACGTCATCCATGCGGTCGAAGACGAGCATAAGGGCTC
GGGTTACAGCAATGTGATGTACATCGCCTCGGTCCCCGCGTGCGCAAAAAACGATGCTTACCTGAAGCGTCAATTGCCGA
GCTTCCTGAAGGGCGAAAGCCCGCCTGATTTTCCAACCGACCATTTTGAAGTCGATTTCACCGGCCGCGCCACGGCCAAG
GACCTGACGCCGCTTGGCAGGGCGCAACTCGGGTTCGATCTGTAG

Upstream 100 bases:

>100_bases
GTTTCATGGCCGAAAACGCAAATGAATTGCCTGAATAGTATCACCAAGGCTCGCATGCGCGGCATATCCTAGCGCATACG
AAATTCATACGGAGACATTC

Downstream 100 bases:

>100_bases
CTGACATGGGCACGCACGCGCAGTCATTCTGATTGCGCATGCGTCGTCCAACCATAACGAAAAATTCGGAGACTGCAATG
AAACGATCACTGACGTCGGT

Product: putative cytoplasmic protein of unknown function(DUF1479)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MALKIDDLPGAIRQAKKELRAALPNYREVFAEVEAAIIAEAKRIAAQRDRGEDVIPEIQFSDITAQRVTPDQIALVKARG
ACVIRQVFPRALVQGWDQDIARYVETNNLDKHLENRAEDKYFGQLASSKPQIYGVYWSKPQVLARQSESLTAARVFLNKL
WRNESDGRVHFDPEHVPVYADRLRRRPPGSASLGLSAHCDGGSVERWIESNFRKVYRHVFAGNWRHYDAFDAAFRTDVEE
IASPAVCSMFRTFQGWTALTPQGPGDGTLQLVPIANSMVYILLRALQDDVAEDDLCGAMPGRALSIKPEFHAPLFEALSS
IPGMEAGDTVFWHSDVIHAVEDEHKGSGYSNVMYIASVPACAKNDAYLKRQLPSFLKGESPPDFPTDHFEVDFTGRATAK
DLTPLGRAQLGFDL

Sequences:

>Translated_414_residues
MALKIDDLPGAIRQAKKELRAALPNYREVFAEVEAAIIAEAKRIAAQRDRGEDVIPEIQFSDITAQRVTPDQIALVKARG
ACVIRQVFPRALVQGWDQDIARYVETNNLDKHLENRAEDKYFGQLASSKPQIYGVYWSKPQVLARQSESLTAARVFLNKL
WRNESDGRVHFDPEHVPVYADRLRRRPPGSASLGLSAHCDGGSVERWIESNFRKVYRHVFAGNWRHYDAFDAAFRTDVEE
IASPAVCSMFRTFQGWTALTPQGPGDGTLQLVPIANSMVYILLRALQDDVAEDDLCGAMPGRALSIKPEFHAPLFEALSS
IPGMEAGDTVFWHSDVIHAVEDEHKGSGYSNVMYIASVPACAKNDAYLKRQLPSFLKGESPPDFPTDHFEVDFTGRATAK
DLTPLGRAQLGFDL
>Mature_413_residues
ALKIDDLPGAIRQAKKELRAALPNYREVFAEVEAAIIAEAKRIAAQRDRGEDVIPEIQFSDITAQRVTPDQIALVKARGA
CVIRQVFPRALVQGWDQDIARYVETNNLDKHLENRAEDKYFGQLASSKPQIYGVYWSKPQVLARQSESLTAARVFLNKLW
RNESDGRVHFDPEHVPVYADRLRRRPPGSASLGLSAHCDGGSVERWIESNFRKVYRHVFAGNWRHYDAFDAAFRTDVEEI
ASPAVCSMFRTFQGWTALTPQGPGDGTLQLVPIANSMVYILLRALQDDVAEDDLCGAMPGRALSIKPEFHAPLFEALSSI
PGMEAGDTVFWHSDVIHAVEDEHKGSGYSNVMYIASVPACAKNDAYLKRQLPSFLKGESPPDFPTDHFEVDFTGRATAKD
LTPLGRAQLGFDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787042, Length=410, Percent_Identity=45.3658536585366, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010856 [H]

Pfam domain/function: PF07350 DUF1479 [H]

EC number: NA

Molecular weight: Translated: 46185; Mature: 46053

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKIDDLPGAIRQAKKELRAALPNYREVFAEVEAAIIAEAKRIAAQRDRGEDVIPEIQF
CEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
SDITAQRVTPDQIALVKARGACVIRQVFPRALVQGWDQDIARYVETNNLDKHLENRAEDK
CCCCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
YFGQLASSKPQIYGVYWSKPQVLARQSESLTAARVFLNKLWRNESDGRVHFDPEHVPVYA
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH
DRLRRRPPGSASLGLSAHCDGGSVERWIESNFRKVYRHVFAGNWRHYDAFDAAFRTDVEE
HHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
IASPAVCSMFRTFQGWTALTPQGPGDGTLQLVPIANSMVYILLRALQDDVAEDDLCGAMP
HCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHCCCC
GRALSIKPEFHAPLFEALSSIPGMEAGDTVFWHSDVIHAVEDEHKGSGYSNVMYIASVPA
CCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCC
CAKNDAYLKRQLPSFLKGESPPDFPTDHFEVDFTGRATAKDLTPLGRAQLGFDL
CCCCCHHHHHHCHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ALKIDDLPGAIRQAKKELRAALPNYREVFAEVEAAIIAEAKRIAAQRDRGEDVIPEIQF
EEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
SDITAQRVTPDQIALVKARGACVIRQVFPRALVQGWDQDIARYVETNNLDKHLENRAEDK
CCCCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
YFGQLASSKPQIYGVYWSKPQVLARQSESLTAARVFLNKLWRNESDGRVHFDPEHVPVYA
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH
DRLRRRPPGSASLGLSAHCDGGSVERWIESNFRKVYRHVFAGNWRHYDAFDAAFRTDVEE
HHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
IASPAVCSMFRTFQGWTALTPQGPGDGTLQLVPIANSMVYILLRALQDDVAEDDLCGAMP
HCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHCCCC
GRALSIKPEFHAPLFEALSSIPGMEAGDTVFWHSDVIHAVEDEHKGSGYSNVMYIASVPA
CCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCC
CAKNDAYLKRQLPSFLKGESPPDFPTDHFEVDFTGRATAKDLTPLGRAQLGFDL
CCCCCHHHHHHCHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]