| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is wcaL [C]
Identifier: 91783578
GI number: 91783578
Start: 2443541
End: 2444707
Strand: Direct
Name: wcaL [C]
Synonym: Bxe_A2237
Alternate gene names: 91783578
Gene position: 2443541-2444707 (Clockwise)
Preceding gene: 91783577
Following gene: 91783579
Centisome position: 49.91
GC content: 67.52
Gene sequence:
>1167_bases ATGACGACAAGCTCCATCAAATCGCTGCAGATCGGGATGCACTGGTTCCCCGAGCGCGCGGGCGGCCTCGACCGCATGTA CTACTCGCTGGTGGGCGCGTTGCCGGGCGCGGGCGTCGCGGTGCGCGGCGTGGTGGCCGGCTCGCCGAAAGTGGCCGCCG ACACCGGTGGCGCGATCAACGGCTTCGGCTCGGCCGCGCAATCGCTGCCGTTGCGCCTGATGGCCGCGCGCCGCGCGCTG CGAGAGGAGATCGGCAAGTCGCGCCCGGACGTGATTTCGTCGCACTTCGCGCTCTACACGTTTCCGGGTCTCGACGTGAC GCGCGGCATACCGCAGGTCTCGCATTTTCAGGGGCCGTGGGCCGACGAAAGTCACGTGGAAGGCGCCGACTCGCTTGGCC AGCGCGCCAAGCGTTACCTGGAGCAATCGGTCTATGCGCGTTCGTCGCGGCTGATCGTGTTGTCCGAGGCGTTCGGCAAG ATTCTGACCTCGCGCTATCGCATTGCGCCGGAGCGGGTGCGCGTCGTGCCCGGCTGCGTGGATGTCGAGCAGTTCAATCT GCCGATCTCGCCCGCCGAGGCGCGCCTGCGGCTGCAATTGCCGCAAGACCGGCCGATCGTGCTGGCGGTGCGGCGCCTGG TGCGCCGCATGGGCCTCGAAGATCTGATCGACGCGGTGAAGCTGCTCAAGCGCAGCGCGCCGGACGTGCTGCTGCTGATT GCCGGCAAAGGGCGGCTCGAAGGCGAACTGCAGGCGCGCATTACCGAGGCGGGTCTGGAGGACAACGTCAAGCTGCTGGG TTTCGTGCCCGATCAGCATCTGGCGGCGTTGTATCGCGCGGCGAACATCAGCGTGGTGCCGACGGTCGCGCTGGAGGGTT TCGGGCTGATTACGGTGGAATCGCTGGCCTCGGGCACGCCGGTGCTGGTGACACCGGTCGGCGGCTTGCCGGAAGCGGTG GCGGGTTTGTCGCCGAATCTGGTGCTGCCGGAGACGGGCGCGAAGGCGATCGCGGATGGTCTGGCGGGCGCGCTCAACGG CACGCTGAAGTTACCCGATGCCGAAGCATGCCGCCGTTATGCGCGTGAGAACTTCGATAACTCGGTGATCGCGAAACGGG TGGCGTCGGTGTATGGGGAGGCGATTGCGGCGGGTGGGGTGCATTGA
Upstream 100 bases:
>100_bases GGCCAGAAGAGCGCGGAATGACGCGGCGGGTTTCAACCAGCCGGCTGACGTATGCGGCGCTTCATCATCACAACTCTCAG AACGCACAGGGGTCACAATC
Downstream 100 bases:
>100_bases GGGCTGAGCGGGGCACATCGCCAGTCGCGGCTGTATGAAAATTCCTTTCTCATTTTCAAAATTTTCCCGTGGCGATGAAT GCGGGGCAGGAGGACCATCG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTTSSIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSPKVAADTGGAINGFGSAAQSLPLRLMAARRAL REEIGKSRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPWADESHVEGADSLGQRAKRYLEQSVYARSSRLIVLSEAFGK ILTSRYRIAPERVRVVPGCVDVEQFNLPISPAEARLRLQLPQDRPIVLAVRRLVRRMGLEDLIDAVKLLKRSAPDVLLLI AGKGRLEGELQARITEAGLEDNVKLLGFVPDQHLAALYRAANISVVPTVALEGFGLITVESLASGTPVLVTPVGGLPEAV AGLSPNLVLPETGAKAIADGLAGALNGTLKLPDAEACRRYARENFDNSVIAKRVASVYGEAIAAGGVH
Sequences:
>Translated_388_residues MTTSSIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSPKVAADTGGAINGFGSAAQSLPLRLMAARRAL REEIGKSRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPWADESHVEGADSLGQRAKRYLEQSVYARSSRLIVLSEAFGK ILTSRYRIAPERVRVVPGCVDVEQFNLPISPAEARLRLQLPQDRPIVLAVRRLVRRMGLEDLIDAVKLLKRSAPDVLLLI AGKGRLEGELQARITEAGLEDNVKLLGFVPDQHLAALYRAANISVVPTVALEGFGLITVESLASGTPVLVTPVGGLPEAV AGLSPNLVLPETGAKAIADGLAGALNGTLKLPDAEACRRYARENFDNSVIAKRVASVYGEAIAAGGVH >Mature_387_residues TTSSIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSPKVAADTGGAINGFGSAAQSLPLRLMAARRALR EEIGKSRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPWADESHVEGADSLGQRAKRYLEQSVYARSSRLIVLSEAFGKI LTSRYRIAPERVRVVPGCVDVEQFNLPISPAEARLRLQLPQDRPIVLAVRRLVRRMGLEDLIDAVKLLKRSAPDVLLLIA GKGRLEGELQARITEAGLEDNVKLLGFVPDQHLAALYRAANISVVPTVALEGFGLITVESLASGTPVLVTPVGGLPEAVA GLSPNLVLPETGAKAIADGLAGALNGTLKLPDAEACRRYARENFDNSVIAKRVASVYGEAIAAGGVH
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788357, Length=178, Percent_Identity=29.7752808988764, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI9755344, Length=234, Percent_Identity=25.6410256410256, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41213; Mature: 41082
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSPKVAADTGGAIN CCCCCCHHHHHCHHCCCHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCC GFGSAAQSLPLRLMAARRALREEIGKSRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHCCCCHHHCCCCC ADESHVEGADSLGQRAKRYLEQSVYARSSRLIVLSEAFGKILTSRYRIAPERVRVVPGCV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHEEECCCEE DVEQFNLPISPAEARLRLQLPQDRPIVLAVRRLVRRMGLEDLIDAVKLLKRSAPDVLLLI CHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE AGKGRLEGELQARITEAGLEDNVKLLGFVPDQHLAALYRAANISVVPTVALEGFGLITVE ECCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEHHHCCCCEEEEH SLASGTPVLVTPVGGLPEAVAGLSPNLVLPETGAKAIADGLAGALNGTLKLPDAEACRRY HHCCCCCEEEECCCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCEECCCHHHHHHH ARENFDNSVIAKRVASVYGEAIAAGGVH HHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTSSIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSPKVAADTGGAIN CCCCCHHHHHCHHCCCHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCC GFGSAAQSLPLRLMAARRALREEIGKSRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHCCCCHHHCCCCC ADESHVEGADSLGQRAKRYLEQSVYARSSRLIVLSEAFGKILTSRYRIAPERVRVVPGCV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHEEECCCEE DVEQFNLPISPAEARLRLQLPQDRPIVLAVRRLVRRMGLEDLIDAVKLLKRSAPDVLLLI CHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE AGKGRLEGELQARITEAGLEDNVKLLGFVPDQHLAALYRAANISVVPTVALEGFGLITVE ECCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEHHHCCCCEEEEH SLASGTPVLVTPVGGLPEAVAGLSPNLVLPETGAKAIADGLAGALNGTLKLPDAEACRRY HHCCCCCEEEECCCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCEECCCHHHHHHH ARENFDNSVIAKRVASVYGEAIAAGGVH HHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]