Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is yceG [C]

Identifier: 91783551

GI number: 91783551

Start: 2413038

End: 2414075

Strand: Direct

Name: yceG [C]

Synonym: Bxe_A2264

Alternate gene names: 91783551

Gene position: 2413038-2414075 (Clockwise)

Preceding gene: 91783548

Following gene: 91783552

Centisome position: 49.29

GC content: 61.18

Gene sequence:

>1038_bases
ATGCAGTCCAACCTTGCCACGTTTCGCATGTCCCTGTTCAAGAAATGTTTCATTGCCGGCTCACTCGTCGTCGTGCTGGC
CGCAGCCGCAATTGCTGGCGGATACCACTGGGCCACCAGCCCGCTCGAACTGACCCCGGCGCAACTGGATGTCACCGTCA
AGCCGCATAGCAGCTTGCGCAGCGTCACGCTGCAACTCAATCGCGGCGGCGTGCCCGTCGAGCCTGAACTGTTTGTCCTG
ATGACGCGGTTGCTGGGGCTGCAAAGCGCGCTGAAATCGGGCAACTACGAGTTCAAGACGGGTGTGACGCCTTACGAGGT
GCTGCAGAAAATCGCTCGCGGCGACGTCAACGAATACGTGGCGACCATTATCGAAGGCTGGACCTTCAAGCGCATGCGCG
CCGAGCTGGATGCCAATCCGGCGCTCAAACACGACACGGCCGGCATGAGCGACACGGATCTGATGAACGCGATCAATGCA
CCGGAAGCGCCGATCGGCAATGGCGAAGGGCTGTTTTTTCCGGACACGTACCTGTTCGACAAGAACACCAGTGATCTCGA
CGTGTACCGCCGCGCCTACCGCCTGATGCGCGTGCGTCTGGACGAAGCGTGGATGGCGCGCGCGCCGAACCTGCCGTACA
GAACGCCGTACGACGCGTTGACGATGGCGTCGATCATCGAAAAGGAAACCGGCAAGACGTCGGACCGGCCGATGGTGGCG
GCGGTGTTCGCGAACCGGCTGCGCGTGGGCATGCCGCTGCAAACCGATCCCACCGTGATCTATGGCATGGGCGACAGCTA
CGCCGGCCGTATCAGAAAAAAAGACCTGCAGACTGACACTCCCTACAATACCTACACCCGGATGGGACTGCCGCCAACGC
CCATCTCGCTGCCCAGTGTGGCGTCGCTGCAGGCGGCGCTGAATCCGGCGCAAACTACCGCGCTGTACTTCGTTTCGCGC
GGCGACGGCAGCAGTATCTTTTCCGACACCCTCGGCGATCACAACAAGGCCGTGGACAAATACATTCGAGGGCAATGA

Upstream 100 bases:

>100_bases
ACGGAGAGCCGGTAGGAGTGCCTGAAGCGGTAGCGAGCGGTGTGTTCATGGATTCCGGGAACAGTCAATTCTGACTTTGG
CTAAGGCAAACAAGTATTAT

Downstream 100 bases:

>100_bases
TGGCGCGGGGCAAATTCATCACGTTTGAGGGCATCGACGGGGCGGGCAAGACAACCCACCTCAGCTGGTTTCGGGAGCGC
CTCGAACAGAAAGTCGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLRSVTLQLNRGGVPVEPELFVL
MTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYVATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINA
PEAPIGNGEGLFFPDTYLFDKNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA
AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSVASLQAALNPAQTTALYFVSR
GDGSSIFSDTLGDHNKAVDKYIRGQ

Sequences:

>Translated_345_residues
MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLRSVTLQLNRGGVPVEPELFVL
MTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYVATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINA
PEAPIGNGEGLFFPDTYLFDKNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA
AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSVASLQAALNPAQTTALYFVSR
GDGSSIFSDTLGDHNKAVDKYIRGQ
>Mature_345_residues
MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLRSVTLQLNRGGVPVEPELFVL
MTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYVATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINA
PEAPIGNGEGLFFPDTYLFDKNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA
AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSVASLQAALNPAQTTALYFVSR
GDGSSIFSDTLGDHNKAVDKYIRGQ

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=309, Percent_Identity=39.8058252427184, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 37973; Mature: 37973

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCE
SVTLQLNRGGVPVEPELFVLMTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYV
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCHHHHH
ATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINAPEAPIGNGEGLFFPDTYLFD
HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEECCCEEEEC
KNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSV
HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCH
ASLQAALNPAQTTALYFVSRGDGSSIFSDTLGDHNKAVDKYIRGQ
HHHHHHCCCHHEEEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCE
SVTLQLNRGGVPVEPELFVLMTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYV
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCHHHHH
ATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINAPEAPIGNGEGLFFPDTYLFD
HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEECCCEEEEC
KNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSV
HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCH
ASLQAALNPAQTTALYFVSRGDGSSIFSDTLGDHNKAVDKYIRGQ
HHHHHHCCCHHEEEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]