| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is yceG [C]
Identifier: 91783551
GI number: 91783551
Start: 2413038
End: 2414075
Strand: Direct
Name: yceG [C]
Synonym: Bxe_A2264
Alternate gene names: 91783551
Gene position: 2413038-2414075 (Clockwise)
Preceding gene: 91783548
Following gene: 91783552
Centisome position: 49.29
GC content: 61.18
Gene sequence:
>1038_bases ATGCAGTCCAACCTTGCCACGTTTCGCATGTCCCTGTTCAAGAAATGTTTCATTGCCGGCTCACTCGTCGTCGTGCTGGC CGCAGCCGCAATTGCTGGCGGATACCACTGGGCCACCAGCCCGCTCGAACTGACCCCGGCGCAACTGGATGTCACCGTCA AGCCGCATAGCAGCTTGCGCAGCGTCACGCTGCAACTCAATCGCGGCGGCGTGCCCGTCGAGCCTGAACTGTTTGTCCTG ATGACGCGGTTGCTGGGGCTGCAAAGCGCGCTGAAATCGGGCAACTACGAGTTCAAGACGGGTGTGACGCCTTACGAGGT GCTGCAGAAAATCGCTCGCGGCGACGTCAACGAATACGTGGCGACCATTATCGAAGGCTGGACCTTCAAGCGCATGCGCG CCGAGCTGGATGCCAATCCGGCGCTCAAACACGACACGGCCGGCATGAGCGACACGGATCTGATGAACGCGATCAATGCA CCGGAAGCGCCGATCGGCAATGGCGAAGGGCTGTTTTTTCCGGACACGTACCTGTTCGACAAGAACACCAGTGATCTCGA CGTGTACCGCCGCGCCTACCGCCTGATGCGCGTGCGTCTGGACGAAGCGTGGATGGCGCGCGCGCCGAACCTGCCGTACA GAACGCCGTACGACGCGTTGACGATGGCGTCGATCATCGAAAAGGAAACCGGCAAGACGTCGGACCGGCCGATGGTGGCG GCGGTGTTCGCGAACCGGCTGCGCGTGGGCATGCCGCTGCAAACCGATCCCACCGTGATCTATGGCATGGGCGACAGCTA CGCCGGCCGTATCAGAAAAAAAGACCTGCAGACTGACACTCCCTACAATACCTACACCCGGATGGGACTGCCGCCAACGC CCATCTCGCTGCCCAGTGTGGCGTCGCTGCAGGCGGCGCTGAATCCGGCGCAAACTACCGCGCTGTACTTCGTTTCGCGC GGCGACGGCAGCAGTATCTTTTCCGACACCCTCGGCGATCACAACAAGGCCGTGGACAAATACATTCGAGGGCAATGA
Upstream 100 bases:
>100_bases ACGGAGAGCCGGTAGGAGTGCCTGAAGCGGTAGCGAGCGGTGTGTTCATGGATTCCGGGAACAGTCAATTCTGACTTTGG CTAAGGCAAACAAGTATTAT
Downstream 100 bases:
>100_bases TGGCGCGGGGCAAATTCATCACGTTTGAGGGCATCGACGGGGCGGGCAAGACAACCCACCTCAGCTGGTTTCGGGAGCGC CTCGAACAGAAAGTCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLRSVTLQLNRGGVPVEPELFVL MTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYVATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINA PEAPIGNGEGLFFPDTYLFDKNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSVASLQAALNPAQTTALYFVSR GDGSSIFSDTLGDHNKAVDKYIRGQ
Sequences:
>Translated_345_residues MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLRSVTLQLNRGGVPVEPELFVL MTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYVATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINA PEAPIGNGEGLFFPDTYLFDKNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSVASLQAALNPAQTTALYFVSR GDGSSIFSDTLGDHNKAVDKYIRGQ >Mature_345_residues MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLRSVTLQLNRGGVPVEPELFVL MTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYVATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINA PEAPIGNGEGLFFPDTYLFDKNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSVASLQAALNPAQTTALYFVSR GDGSSIFSDTLGDHNKAVDKYIRGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=309, Percent_Identity=39.8058252427184, Blast_Score=213, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37973; Mature: 37973
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCE SVTLQLNRGGVPVEPELFVLMTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYV EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCHHHHH ATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINAPEAPIGNGEGLFFPDTYLFD HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEECCCEEEEC KNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSV HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCH ASLQAALNPAQTTALYFVSRGDGSSIFSDTLGDHNKAVDKYIRGQ HHHHHHCCCHHEEEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MQSNLATFRMSLFKKCFIAGSLVVVLAAAAIAGGYHWATSPLELTPAQLDVTVKPHSSLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCE SVTLQLNRGGVPVEPELFVLMTRLLGLQSALKSGNYEFKTGVTPYEVLQKIARGDVNEYV EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCHHHHH ATIIEGWTFKRMRAELDANPALKHDTAGMSDTDLMNAINAPEAPIGNGEGLFFPDTYLFD HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEECCCEEEEC KNTSDLDVYRRAYRLMRVRLDEAWMARAPNLPYRTPYDALTMASIIEKETGKTSDRPMVA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH AVFANRLRVGMPLQTDPTVIYGMGDSYAGRIRKKDLQTDTPYNTYTRMGLPPTPISLPSV HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCH ASLQAALNPAQTTALYFVSRGDGSSIFSDTLGDHNKAVDKYIRGQ HHHHHHCCCHHEEEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]