| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is lon [H]
Identifier: 91783522
GI number: 91783522
Start: 2375717
End: 2378140
Strand: Direct
Name: lon [H]
Synonym: Bxe_A2293
Alternate gene names: 91783522
Gene position: 2375717-2378140 (Clockwise)
Preceding gene: 91783521
Following gene: 91783523
Centisome position: 48.53
GC content: 60.4
Gene sequence:
>2424_bases ATGTCAGGAACCCAACTCCTTCCGCCGGAACGCATTACGCTCCCGCTGCTCCCGCTGCGTGACGTAGTCGTTTTCCCGCA CATGGTGATTCCGCTCTTCGTAGGCCGCCCGAAGTCGATCAAGGCTCTCGAAGCAGCGATGGAAGGCGGCAAGCACATCA TGCTCGTCGCCCAGAAAACGGCTGCGAAAGATGAGCCGACCGAAAAGGACATGTACGAAGTAGGATGCGTTGCTAACATC CTGCAAATGCTCAAGCTGCCCGATGGCACCGTCAAGGTGCTCGTCGAAGGCTTGCAGCGCGCGAAAACGCTTTCCATCGA AGAACAGGAAACGCAGTTCTCGTGCGAAGTCATGCCGCTCGAACCCGACCACGCCGACAGCGCTGAAACCGAAGCGCTGC GCCGCGCGATCGTGTCGCAGTTCGACCAGTATGTGAAGCTGAACAAGAAGATCCCGCCGGAGATCCTGACGTCGCTGTCG GGGATCGACGAGGCCGGGCGTCTGGCCGACACGATCGCGGCGCATCTGCCGCTCAAGCTCGACCAGAAGCAGCACATCCT CGAAATGTTCCCGGTCATCGAGCGGCTCGAGCATCTGCTCGCGCAACTCGAAGCCGAGATCGACATCCTGCAGGTCGAAA AGCGCATCCGCGGGCGTGTCAAACGCCAGATGGAGAAGAGCCAGCGCGAGTACTACCTGAACGAACAGGTCAAGGCGATT CAGAAGGAACTCGGCGAAGGCGAGGAAGGTGCGGATCTCGAAGAACTCGAGAAGCGCATCACGGCTGCCCGCATGCCGAA GGAAGCCAAGAAGAAGGCCGACGCCGAGCTGAAAAAGCTCAAGCTGATGTCGCCGATGTCGGCTGAAGCCACCGTCGTGC GCAACTATATCGACACGCTGATCGGCTTGCCGTGGCGCAAGAAGAGCAAGGTCAACAACGACCTCTCGAATGCGGAACGC GTACTCGACGAAGACCACTTCGGTCTCGAGAAAGTGAAGGAACGCATTCTCGAGTATCTCGCGGTCCAGCAACGTGTCGA CAAGGTCAAGGCGCCGATCCTGTGCCTCGTTGGGCCTCCGGGTGTCGGTAAGACGTCGCTGGGTCAGTCGATCGCTCGCG CCACGAATCGCAAGTTCGTGCGTATGGCGCTTGGTGGCGTGCGCGACGAAGCCGAGATTCGCGGTCACCGTCGTACGTAC ATTGGTTCGATGCCCGGCAAGATTCTGCAAAGCCTGACCAAGGTCGGCGTGCGCAATCCGCTCTTCCTGCTCGACGAAGT CGACAAGATGGGCCAGGATTTCCGCGGCGATCCGTCTTCGGCTCTGCTGGAAGTGCTCGATCCGGAACAGAACCATACGT TCGCCGATCACTACGTCGAAGTCGACTTCGATCTCTCGGACGTGATGTTCGTGGCGACGTCGAACTCGCTGAACATTCCG CCGCCGTTGCTCGACCGGATGGAAGTGATCCGTCTGTCGGGTTACACGGAAGACGAGAAGGTCAGCATCGCGCAACGTTA TCTTTTGCCCAAACAGAAGAAGAACAACGGCCTCAAGGATGGCGAGGTCGATGTGACGGAAACCGCGATCCGCGACATCA TTCGCTACTACACGCGTGAAGCGGGCGTGCGTTCGCTCGAGCGTGAAATTTCGAAGATCTGCCGCAAGGTCGTGAAGATG CTTCTGCTGAAGAAGGCGGAAGGCGCGGTGAAGGTGGACGGCAGCAACCTCGACACGTTCCTCGGCGTGCGCAAGTACGA CTTCGGTCTGGCTGCGAAGGAAAATCAGGTTGGCCAGGTCACGGGTCTCGCGTGGACGGAAGTGGGCGGCGATCTGCTGA CCATTGAAGCCGCGGTGATGCCGGGCAAGGGCAACGTGATCCGCACGGGTTCGCTCGGCGACGTGATGAAGGAATCGGTC GAGGCAGCACGCTCGGTGGTCCGTTCGCGCTCGCGTCGTCTCGGCATCAAGGACGAAGCGTTCGAGAAGCAGGACATTCA CATCCACGTGCCGGAAGGCGCGACGCCGAAAGACGGCCCGTCTGCCGGTATCGCGATGACGACCGCGCTGGTGTCGGTGC TGACCGGCATTCCGGTGCGTGCCGACGTCGCGATGACGGGCGAAATCACGTTGCGTGGCGAAGTTCTGCCGATCGGCGGC CTGAAGGAAAAGCTGCTGGCGGCGCATCGCGGCGGCATCAAGCTGGTGCTGATTCCGGAAGAAAACGTCAAGGACTTGAC GGAGATTCCGGACAACGTGAAGAACGCCATCGAAATCGTGCCGGTCCGCTGGGTCGACAAGGTGCTCGAACTCGCGCTCG AACGTGTGCCGTCGGCGTTGCCGGATGAAGAGCCGAAGCCTGCTGCGCCGGTTGCAGCGGAGCCGGGCAAAGACGCCGCA GCAACAGAGGTGGTGAAGCACTAG
Upstream 100 bases:
>100_bases ACCTTCGGAGTCACTGAACTTTTCCCACACGCGGAGGCTTGCAATCTTTTCTGCTGGCCTCACCTATCGAACGAACTGAT TCCACTCATGGGGAAATGAA
Downstream 100 bases:
>100_bases GACGGTCAGCAACGAAGCTGTTTGCTGCAAAGAACCCGCGGTCACGGCCGCGGGTTTTTTCTTGTCCGCTCTCCATTTCC GCAAAGCGTCCGCGAGGCAC
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MSGTQLLPPERITLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEGGKHIMLVAQKTAAKDEPTEKDMYEVGCVANI LQMLKLPDGTVKVLVEGLQRAKTLSIEEQETQFSCEVMPLEPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLS GIDEAGRLADTIAAHLPLKLDQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI QKELGEGEEGADLEELEKRITAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTLIGLPWRKKSKVNNDLSNAER VLDEDHFGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTY IGSMPGKILQSLTKVGVRNPLFLLDEVDKMGQDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKDGEVDVTETAIRDIIRYYTREAGVRSLEREISKICRKVVKM LLLKKAEGAVKVDGSNLDTFLGVRKYDFGLAAKENQVGQVTGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESV EAARSVVRSRSRRLGIKDEAFEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG LKEKLLAAHRGGIKLVLIPEENVKDLTEIPDNVKNAIEIVPVRWVDKVLELALERVPSALPDEEPKPAAPVAAEPGKDAA ATEVVKH
Sequences:
>Translated_807_residues MSGTQLLPPERITLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEGGKHIMLVAQKTAAKDEPTEKDMYEVGCVANI LQMLKLPDGTVKVLVEGLQRAKTLSIEEQETQFSCEVMPLEPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLS GIDEAGRLADTIAAHLPLKLDQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI QKELGEGEEGADLEELEKRITAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTLIGLPWRKKSKVNNDLSNAER VLDEDHFGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTY IGSMPGKILQSLTKVGVRNPLFLLDEVDKMGQDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKDGEVDVTETAIRDIIRYYTREAGVRSLEREISKICRKVVKM LLLKKAEGAVKVDGSNLDTFLGVRKYDFGLAAKENQVGQVTGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESV EAARSVVRSRSRRLGIKDEAFEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG LKEKLLAAHRGGIKLVLIPEENVKDLTEIPDNVKNAIEIVPVRWVDKVLELALERVPSALPDEEPKPAAPVAAEPGKDAA ATEVVKH >Mature_806_residues SGTQLLPPERITLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEGGKHIMLVAQKTAAKDEPTEKDMYEVGCVANIL QMLKLPDGTVKVLVEGLQRAKTLSIEEQETQFSCEVMPLEPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSG IDEAGRLADTIAAHLPLKLDQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ KELGEGEEGADLEELEKRITAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTLIGLPWRKKSKVNNDLSNAERV LDEDHFGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYI GSMPGKILQSLTKVGVRNPLFLLDEVDKMGQDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIPP PLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKDGEVDVTETAIRDIIRYYTREAGVRSLEREISKICRKVVKML LLKKAEGAVKVDGSNLDTFLGVRKYDFGLAAKENQVGQVTGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESVE AARSVVRSRSRRLGIKDEAFEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGGL KEKLLAAHRGGIKLVLIPEENVKDLTEIPDNVKNAIEIVPVRWVDKVLELALERVPSALPDEEPKPAAPVAAEPGKDAAA TEVVKH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=568, Percent_Identity=46.4788732394366, Blast_Score=520, Evalue=1e-147, Organism=Homo sapiens, GI21396489, Length=683, Percent_Identity=40.2635431918009, Blast_Score=501, Evalue=1e-141, Organism=Escherichia coli, GI1786643, Length=772, Percent_Identity=70.3367875647668, Blast_Score=1088, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=692, Percent_Identity=39.3063583815029, Blast_Score=473, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17556486, Length=540, Percent_Identity=40.5555555555556, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319449, Length=720, Percent_Identity=41.5277777777778, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI221513036, Length=677, Percent_Identity=42.0974889217134, Blast_Score=514, Evalue=1e-146, Organism=Drosophila melanogaster, GI24666867, Length=677, Percent_Identity=42.0974889217134, Blast_Score=513, Evalue=1e-145,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89242; Mature: 89111
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTQLLPPERITLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEGGKHIMLVAQKT CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECC AAKDEPTEKDMYEVGCVANILQMLKLPDGTVKVLVEGLQRAKTLSIEEQETQFSCEVMPL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEEEEC EPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPLKL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC DQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELGEGEEGADLEELEKRITAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTL HHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IGLPWRKKSKVNNDLSNAERVLDEDHFGLEKVKERILEYLAVQQRVDKVKAPILCLVGPP HCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLTKVGVRNP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCC LFLLDEVDKMGQDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEECCEEEEEECCCCEEEEEECCCCCCC PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKDGEVDVTETAIRDIIRYYTRE CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH AGVRSLEREISKICRKVVKMLLLKKAEGAVKVDGSNLDTFLGVRKYDFGLAAKENQVGQV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCHHHCCCCCCCCCCCCCE TGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESVEAARSVVRSRSRRLGIKDEA ECEEHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHC FEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEECEEEEECEEEECCC LKEKLLAAHRGGIKLVLIPEENVKDLTEIPDNVKNAIEIVPVRWVDKVLELALERVPSAL HHHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHEEECHHHHHHHHHHHHHHCCCCC PDEEPKPAAPVAAEPGKDAAATEVVKH CCCCCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure SGTQLLPPERITLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEGGKHIMLVAQKT CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECC AAKDEPTEKDMYEVGCVANILQMLKLPDGTVKVLVEGLQRAKTLSIEEQETQFSCEVMPL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEEEEC EPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPLKL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC DQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELGEGEEGADLEELEKRITAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTL HHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IGLPWRKKSKVNNDLSNAERVLDEDHFGLEKVKERILEYLAVQQRVDKVKAPILCLVGPP HCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLTKVGVRNP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCC LFLLDEVDKMGQDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEECCEEEEEECCCCEEEEEECCCCCCC PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKDGEVDVTETAIRDIIRYYTRE CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH AGVRSLEREISKICRKVVKMLLLKKAEGAVKVDGSNLDTFLGVRKYDFGLAAKENQVGQV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCHHHCCCCCCCCCCCCCE TGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESVEAARSVVRSRSRRLGIKDEA ECEEHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHC FEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEECEEEEECEEEECCC LKEKLLAAHRGGIKLVLIPEENVKDLTEIPDNVKNAIEIVPVRWVDKVLELALERVPSAL HHHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHEEECHHHHHHHHHHHHHHCCCCC PDEEPKPAAPVAAEPGKDAAATEVVKH CCCCCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8981986; 12620739 [H]