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The map label for this gene is virB3 [H]

Identifier: 91783149

GI number: 91783149

Start: 1994689

End: 1995009

Strand: Direct

Name: virB3 [H]

Synonym: Bxe_A2656

Alternate gene names: 91783149

Gene position: 1994689-1995009 (Clockwise)

Preceding gene: 91783148

Following gene: 91783150

Centisome position: 40.74

GC content: 65.42

Gene sequence:

>321_bases
ATGAACCCGCTCAAGGATCCCGTCTTCAAAGGCTGCACGCGTCCCGCGATGCTCTGGGGCGTGCCGCTCGTGCTGTTCCT
GATGGTCGGCGGCGGCATGCTGATCCCGGCTATCTGGGCGCTGCTCGCGAGTCCGCCGCTGGGTGTCGCGATCCTCTTTC
TGATGATCCCCGTATTCGTCGCGATGCGCGTGATCACGCGCCACGACGACCAGCGGCTCGCGCAGTACGTTCTGCGCCTG
CGCATGGTGCTGCGTCAGGGCAATCGCCGCTTCTGGGGCGTGCATGCCTATGTGCCCGTTCGCCTGAAGAGGAGGGTGTG
A

Upstream 100 bases:

>100_bases
GCGACATCGCGAACGTATTCATCGGCGGGCTGTTCGTCGGCTGCGCGACCGTGATCGCCGGCATGCTGATCCCGACGAGC
TGATCCGGGAGCGCCGAACC

Downstream 100 bases:

>100_bases
CATGCAAGTCGAGCCGCAACTGCTCAGCGTCGCGAACCGGGAAGTGCCGCTTGCTGGCTATATCCCGTACTCGGCGCATG
TGACCGATCACGTCATCAAG

Product: putative type IV secretion system protein VirB3/TraD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MNPLKDPVFKGCTRPAMLWGVPLVLFLMVGGGMLIPAIWALLASPPLGVAILFLMIPVFVAMRVITRHDDQRLAQYVLRL
RMVLRQGNRRFWGVHAYVPVRLKRRV

Sequences:

>Translated_106_residues
MNPLKDPVFKGCTRPAMLWGVPLVLFLMVGGGMLIPAIWALLASPPLGVAILFLMIPVFVAMRVITRHDDQRLAQYVLRL
RMVLRQGNRRFWGVHAYVPVRLKRRV
>Mature_106_residues
MNPLKDPVFKGCTRPAMLWGVPLVLFLMVGGGMLIPAIWALLASPPLGVAILFLMIPVFVAMRVITRHDDQRLAQYVLRL
RMVLRQGNRRFWGVHAYVPVRLKRRV

Specific function: The virB operon is essential for intracellular survival and is not involved in the invasion process. Constitutes a major determinant of virulence in mice [H]

COG id: COG3702

COG function: function code U; Type IV secretory pathway, VirB3 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virB3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007792 [H]

Pfam domain/function: PF05101 VirB3 [H]

EC number: NA

Molecular weight: Translated: 12104; Mature: 12104

Theoretical pI: Translated: 12.37; Mature: 12.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLKDPVFKGCTRPAMLWGVPLVLFLMVGGGMLIPAIWALLASPPLGVAILFLMIPVFV
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AMRVITRHDDQRLAQYVLRLRMVLRQGNRRFWGVHAYVPVRLKRRV
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCC
>Mature Secondary Structure
MNPLKDPVFKGCTRPAMLWGVPLVLFLMVGGGMLIPAIWALLASPPLGVAILFLMIPVFV
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AMRVITRHDDQRLAQYVLRLRMVLRQGNRRFWGVHAYVPVRLKRRV
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10940027 [H]