| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783148
Identifier: 91783148
GI number: 91783148
Start: 1994330
End: 1994671
Strand: Direct
Name: 91783148
Synonym: Bxe_A2657
Alternate gene names: NA
Gene position: 1994330-1994671 (Clockwise)
Preceding gene: 91783147
Following gene: 91783149
Centisome position: 40.74
GC content: 59.94
Gene sequence:
>342_bases ATGAAATCAGGATTACTAAATAGTCGGAAGCATGTTTCAACCGCTTCGAATGACGTGTGGTCATCACGGCAGGCCGCACG ACGGATAACTGCCGGGGCAGCAGCGCTGCTGGTCACGTCGCCCGCCTGGGCCCAGCTCTCTCAGGTCAATACGTTGCTGA CCACGATCCAGACGACGCTGCTCGGCGTCGGCGGCGTGATCTGCTCGATTTCCATTATCTGGGCAGGCTTCCGAATGATG TTCCAGCACGCCCGGTTTGGCGACATCGCGAACGTATTCATCGGCGGGCTGTTCGTCGGCTGCGCGACCGTGATCGCCGG CATGCTGATCCCGACGAGCTGA
Upstream 100 bases:
>100_bases CAACCGGCAACTCCACGCGGGACCCGAACGATAGCGCAGTGGTGTTCTAGCCCGACGACCAGACGATAGCAGGTAGATCT AGAACGGAAGGGAGTTATTC
Downstream 100 bases:
>100_bases TCCGGGAGCGCCGAACCATGAACCCGCTCAAGGATCCCGTCTTCAAAGGCTGCACGCGTCCCGCGATGCTCTGGGGCGTG CCGCTCGTGCTGTTCCTGAT
Product: putative type IV secretion system protein VirB2/TraC
Products: NA
Alternate protein names: Conjugal Transfer Protein TrbC
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKSGLLNSRKHVSTASNDVWSSRQAARRITAGAAALLVTSPAWAQLSQVNTLLTTIQTTLLGVGGVICSISIIWAGFRMM FQHARFGDIANVFIGGLFVGCATVIAGMLIPTS
Sequences:
>Translated_113_residues MKSGLLNSRKHVSTASNDVWSSRQAARRITAGAAALLVTSPAWAQLSQVNTLLTTIQTTLLGVGGVICSISIIWAGFRMM FQHARFGDIANVFIGGLFVGCATVIAGMLIPTS >Mature_113_residues MKSGLLNSRKHVSTASNDVWSSRQAARRITAGAAALLVTSPAWAQLSQVNTLLTTIQTTLLGVGGVICSISIIWAGFRMM FQHARFGDIANVFIGGLFVGCATVIAGMLIPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11893; Mature: 11893
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSGLLNSRKHVSTASNDVWSSRQAARRITAGAAALLVTSPAWAQLSQVNTLLTTIQTTL CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LGVGGVICSISIIWAGFRMMFQHARFGDIANVFIGGLFVGCATVIAGMLIPTS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSGLLNSRKHVSTASNDVWSSRQAARRITAGAAALLVTSPAWAQLSQVNTLLTTIQTTL CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LGVGGVICSISIIWAGFRMMFQHARFGDIANVFIGGLFVGCATVIAGMLIPTS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA