| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783089
Identifier: 91783089
GI number: 91783089
Start: 1934823
End: 1935893
Strand: Direct
Name: 91783089
Synonym: Bxe_A2721
Alternate gene names: NA
Gene position: 1934823-1935893 (Clockwise)
Preceding gene: 91783087
Following gene: 91783090
Centisome position: 39.52
GC content: 57.52
Gene sequence:
>1071_bases ATGACCGGTCCATGTCGACGCGTTCGATCTGATGTTTCGAAAACGTGCCATTTTCAATTACCAAGCTTGAGCGGGCTGCC GCCGACCGAATCCATGAGCCATTCTCGAATTGACGTCCATCATCATATTCTTCCGCCGCAATATGTCGAAGCCGTCGGCA CTGATGCCATCGCCAGGCAAGGCTCGTCGGGGCGGGTGCCGCAGTGGAGTGTGGATGAGGCACTATCTCTCATGGATAGA AGCGGGATCGGGACTGCGATTACCTCGATAACGGCGCCTGGCGTCTCCGCTCTAGCAGAGGTCGAGGCGGGTGGCCTTGC GCGCTGGTGCAACGAATTTTCGGCGAATATGGTGCGGGATTGGCCTGGCCGTTTCGGTATGTTCGCATGCCTGCCGCTTC AATCAATCGACAATGCGTTGCGTGAAGCGGTGTATTCGCTCGAAACACTGAAGGCGGACGGAGTGTGCCTCCTGTCAAAT TACGATGGACGGTATCTGGGCGATCCGGTCATGCGGCCGTTGTACGAGGAGCTCAACCGGCGCAAAGCGGTCGTCTTCGT TCACCCGACGTCTCCCGCGAGTATGGTGCCGATAGACCAGTTGTCGCCGTCGAGTCTGGAGTTTCCTTTCGATACGACCC GCACCGTCGCTTCGCTGATTTTCGGAGGCATCACGACAGACTATCCGGAGATACGGTGGATTCTGTCCCACGCTGGCGGA GCAATGCCGTATCTCGCTGGCCGCATCGAGTTGCTGACGCGTAACAACCCGGCCTTGCGTGAACGTATCCCGGACGGTTT TCGGAGAGCTATGGCAACGTTCTTCTTCGACTGCGCGTTATCAGTTGATCCCGCACAGTTTGCGGCCCTGAGGGAACTCG TTCCGGATAGCCAGCTCCTGTTCGGCACCGACTATCCGTTTGGTCCAAAAGGGCAGATCGCGGAAACGGTTTCGGGTGTT CTCGATGTGGGATTGGAGCCGGGCACGTTGAAGGCGCTGGAGTCCGATAATGCATTGAGCCTGTTTCCGCGCCTACGCGA TTTTCAGGAAACGGCGACGGAAGTAGATTGA
Upstream 100 bases:
>100_bases ATGTAAATCAGTAAGTGGTCTGACGACGACCGCATGACGTATCGTCGTCAAGATGGCGGTTAACGCAGGTCATCCGAATC GAGAGATCGGATCGAAGGCG
Downstream 100 bases:
>100_bases TCCGGCTTGCTGCCGGAGGGTAGATGGCAAGAGTCCTGACCAGTAAATATTAATTACATAGTCATACTTATTATTATCAG GTGGCAAGCTGAAAACGAAG
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: Amidohydrolase; Metal-Dependent Hydrolase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Amidohydrolase/Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; O-Pyrocatechuate Decarboxylase; Amidohydrolase Family Protein; Hydrolase; Amidohydrolase Family; 5-Carboxyvanillate Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Twin-Arginine Translocation Pathway Signal; Tryptophan 2 3-Dioxygenase; Decarboxylase; Metal Dependent Hydrolase; 2 3-Dihydroxybenzoic Acid Decarboxylase; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTGPCRRVRSDVSKTCHFQLPSLSGLPPTESMSHSRIDVHHHILPPQYVEAVGTDAIARQGSSGRVPQWSVDEALSLMDR SGIGTAITSITAPGVSALAEVEAGGLARWCNEFSANMVRDWPGRFGMFACLPLQSIDNALREAVYSLETLKADGVCLLSN YDGRYLGDPVMRPLYEELNRRKAVVFVHPTSPASMVPIDQLSPSSLEFPFDTTRTVASLIFGGITTDYPEIRWILSHAGG AMPYLAGRIELLTRNNPALRERIPDGFRRAMATFFFDCALSVDPAQFAALRELVPDSQLLFGTDYPFGPKGQIAETVSGV LDVGLEPGTLKALESDNALSLFPRLRDFQETATEVD
Sequences:
>Translated_356_residues MTGPCRRVRSDVSKTCHFQLPSLSGLPPTESMSHSRIDVHHHILPPQYVEAVGTDAIARQGSSGRVPQWSVDEALSLMDR SGIGTAITSITAPGVSALAEVEAGGLARWCNEFSANMVRDWPGRFGMFACLPLQSIDNALREAVYSLETLKADGVCLLSN YDGRYLGDPVMRPLYEELNRRKAVVFVHPTSPASMVPIDQLSPSSLEFPFDTTRTVASLIFGGITTDYPEIRWILSHAGG AMPYLAGRIELLTRNNPALRERIPDGFRRAMATFFFDCALSVDPAQFAALRELVPDSQLLFGTDYPFGPKGQIAETVSGV LDVGLEPGTLKALESDNALSLFPRLRDFQETATEVD >Mature_355_residues TGPCRRVRSDVSKTCHFQLPSLSGLPPTESMSHSRIDVHHHILPPQYVEAVGTDAIARQGSSGRVPQWSVDEALSLMDRS GIGTAITSITAPGVSALAEVEAGGLARWCNEFSANMVRDWPGRFGMFACLPLQSIDNALREAVYSLETLKADGVCLLSNY DGRYLGDPVMRPLYEELNRRKAVVFVHPTSPASMVPIDQLSPSSLEFPFDTTRTVASLIFGGITTDYPEIRWILSHAGGA MPYLAGRIELLTRNNPALRERIPDGFRRAMATFFFDCALSVDPAQFAALRELVPDSQLLFGTDYPFGPKGQIAETVSGVL DVGLEPGTLKALESDNALSLFPRLRDFQETATEVD
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=331, Percent_Identity=25.3776435045317, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71995651, Length=300, Percent_Identity=23.3333333333333, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38890; Mature: 38758
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPCRRVRSDVSKTCHFQLPSLSGLPPTESMSHSRIDVHHHILPPQYVEAVGTDAIARQ CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHCCHHHHHC GSSGRVPQWSVDEALSLMDRSGIGTAITSITAPGVSALAEVEAGGLARWCNEFSANMVRD CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH WPGRFGMFACLPLQSIDNALREAVYSLETLKADGVCLLSNYDGRYLGDPVMRPLYEELNR CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCC RKAVVFVHPTSPASMVPIDQLSPSSLEFPFDTTRTVASLIFGGITTDYPEIRWILSHAGG CEEEEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCC AMPYLAGRIELLTRNNPALRERIPDGFRRAMATFFFDCALSVDPAQFAALRELVPDSQLL CCHHHHCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE FGTDYPFGPKGQIAETVSGVLDVGLEPGTLKALESDNALSLFPRLRDFQETATEVD EECCCCCCCCCHHHHHHHHHHHCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGPCRRVRSDVSKTCHFQLPSLSGLPPTESMSHSRIDVHHHILPPQYVEAVGTDAIARQ CCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHCCHHHHHC GSSGRVPQWSVDEALSLMDRSGIGTAITSITAPGVSALAEVEAGGLARWCNEFSANMVRD CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH WPGRFGMFACLPLQSIDNALREAVYSLETLKADGVCLLSNYDGRYLGDPVMRPLYEELNR CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCC RKAVVFVHPTSPASMVPIDQLSPSSLEFPFDTTRTVASLIFGGITTDYPEIRWILSHAGG CEEEEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCC AMPYLAGRIELLTRNNPALRERIPDGFRRAMATFFFDCALSVDPAQFAALRELVPDSQLL CCHHHHCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE FGTDYPFGPKGQIAETVSGVLDVGLEPGTLKALESDNALSLFPRLRDFQETATEVD EECCCCCCCCCHHHHHHHHHHHCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA