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The map label for this gene is rssA [H]

Identifier: 91782894

GI number: 91782894

Start: 1689094

End: 1690047

Strand: Direct

Name: rssA [H]

Synonym: Bxe_A2928

Alternate gene names: 91782894

Gene position: 1689094-1690047 (Clockwise)

Preceding gene: 91782893

Following gene: 91782895

Centisome position: 34.5

GC content: 69.39

Gene sequence:

>954_bases
ATGATACGTCGACGTCGATACAGCCGGATCGGGCTGGTGTTGGGGGGCGGCGCCGCGCGCGGCTGGGCGCATATCGGCGC
GATTCGCGCGCTGCACGATGCGGGCATCCGGCCCGACGTGGTCTGCGGCACGTCGATCGGCGCACTGGTGGGCGCGGTTT
ACGCGAACGGCGACCTGGACTGGCTCGAAGAGTGGGTCTCGCGGCTCACGTGGCAGACGGTCGTGCGCCTGCTCGATCTG
CGCCTCTCGGGCGGCCTGCTCGGCGGGCGCAAGGTGATCCAGCTGTTCGCCGACAAGTTCAACGGCCGTTCGATCGCCCA
GTTGAACATGCCGTTCGCGGCGGTCGCCACCGAACTCGATTCGGGCCGTGAAAGCTGGTTGCAGGACGGCAGCGTGGTCG
AGGCGGTGCGCGCTTCGATCGCGATTCCCGGCATTTTCACGCCGGTGTGGCACAACGGCGTCTGGCTCGTGGACGGCGGC
CTGAGCAACCCGGTGCCGGTTTCGGTGGCTCGCGGCATGCGCGCGGACTGCGTGATCGCCGTGGATCTGAACAACGACAT
TCTGAATGGCCGCGATTTCGGCGGCGCGGTGGTCGATACGCCGGCCATCGATCCGGCCGTGCCGCAGGCAATCGCGCTGC
GCCGCAACGGCAAGCCCTGGCCGCGCTGGCTCGCGCCCGCCGAAGGGCGCGCCACCGACGACGTGCGCGTGCCGCCCGCG
CCGAGCGCACGCGTGCCGTCCATGCTCAGTTCGATCGCGCAGAGTATCGACATCATGCAGGTGCGGATCACGCGCAGCCG
TCTGGCGGGCGAACCGGCGGACATCCTGATCCAGCCGCGCCTGGGCGGCATGGGAATTTTCGACTTTCACCGCGCGGCGC
CAGCCATCGAGGAAGGGCGCGCGGCGGTGGAGCAGATGCTGCCGGCCATTCGGGCACGCCTGGGCATCGATTAG

Upstream 100 bases:

>100_bases
GGGATCTTCAACGTGCATTTCGACCAGTTTCAGAAGGTGTACACGACATCGCGCTCCGACGTGAATCGTGGGCGATAGAA
GATAGAAAGCGGGGAAGAAG

Downstream 100 bases:

>100_bases
GGCGTTCCAGGCGCCCGCCGTCTATCGAAAAAGCGACCCGAAACTTGCTAAATCGCGGCGGCGCTCGCCATGCGCCTGCC
GCCTTGCAAGTCCGATTCCC

Product: putative patatin-like phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIRRRRYSRIGLVLGGGAARGWAHIGAIRALHDAGIRPDVVCGTSIGALVGAVYANGDLDWLEEWVSRLTWQTVVRLLDL
RLSGGLLGGRKVIQLFADKFNGRSIAQLNMPFAAVATELDSGRESWLQDGSVVEAVRASIAIPGIFTPVWHNGVWLVDGG
LSNPVPVSVARGMRADCVIAVDLNNDILNGRDFGGAVVDTPAIDPAVPQAIALRRNGKPWPRWLAPAEGRATDDVRVPPA
PSARVPSMLSSIAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAAPAIEEGRAAVEQMLPAIRARLGID

Sequences:

>Translated_317_residues
MIRRRRYSRIGLVLGGGAARGWAHIGAIRALHDAGIRPDVVCGTSIGALVGAVYANGDLDWLEEWVSRLTWQTVVRLLDL
RLSGGLLGGRKVIQLFADKFNGRSIAQLNMPFAAVATELDSGRESWLQDGSVVEAVRASIAIPGIFTPVWHNGVWLVDGG
LSNPVPVSVARGMRADCVIAVDLNNDILNGRDFGGAVVDTPAIDPAVPQAIALRRNGKPWPRWLAPAEGRATDDVRVPPA
PSARVPSMLSSIAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAAPAIEEGRAAVEQMLPAIRARLGID
>Mature_317_residues
MIRRRRYSRIGLVLGGGAARGWAHIGAIRALHDAGIRPDVVCGTSIGALVGAVYANGDLDWLEEWVSRLTWQTVVRLLDL
RLSGGLLGGRKVIQLFADKFNGRSIAQLNMPFAAVATELDSGRESWLQDGSVVEAVRASIAIPGIFTPVWHNGVWLVDGG
LSNPVPVSVARGMRADCVIAVDLNNDILNGRDFGGAVVDTPAIDPAVPQAIALRRNGKPWPRWLAPAEGRATDDVRVPPA
PSARVPSMLSSIAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAAPAIEEGRAAVEQMLPAIRARLGID

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=188, Percent_Identity=36.1702127659575, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI116256487, Length=188, Percent_Identity=36.1702127659575, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656043, Length=188, Percent_Identity=36.1702127659575, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656037, Length=188, Percent_Identity=36.1702127659575, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656039, Length=188, Percent_Identity=36.1702127659575, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI148727290, Length=197, Percent_Identity=33.502538071066, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI148727335, Length=197, Percent_Identity=33.502538071066, Blast_Score=92, Evalue=7e-19,
Organism=Escherichia coli, GI226510936, Length=314, Percent_Identity=41.4012738853503, Blast_Score=219, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI71997299, Length=215, Percent_Identity=29.7674418604651, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71997289, Length=215, Percent_Identity=29.7674418604651, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=191, Percent_Identity=29.3193717277487, Blast_Score=83, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281376913, Length=199, Percent_Identity=35.1758793969849, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28571388, Length=199, Percent_Identity=34.6733668341709, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33995; Mature: 33995

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRRRYSRIGLVLGGGAARGWAHIGAIRALHDAGIRPDVVCGTSIGALVGAVYANGDLD
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCHH
WLEEWVSRLTWQTVVRLLDLRLSGGLLGGRKVIQLFADKFNGRSIAQLNMPFAAVATELD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
SGRESWLQDGSVVEAVRASIAIPGIFTPVWHNGVWLVDGGLSNPVPVSVARGMRADCVIA
CCHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCHHHHCCCCCCEEEE
VDLNNDILNGRDFGGAVVDTPAIDPAVPQAIALRRNGKPWPRWLAPAEGRATDDVRVPPA
EECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PSARVPSMLSSIAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAAPAIEEGR
CCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCEEEECCCCCCCCHHHHHHCCCHHHHH
AAVEQMLPAIRARLGID
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRRRRYSRIGLVLGGGAARGWAHIGAIRALHDAGIRPDVVCGTSIGALVGAVYANGDLD
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCHH
WLEEWVSRLTWQTVVRLLDLRLSGGLLGGRKVIQLFADKFNGRSIAQLNMPFAAVATELD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
SGRESWLQDGSVVEAVRASIAIPGIFTPVWHNGVWLVDGGLSNPVPVSVARGMRADCVIA
CCHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCHHHHCCCCCCEEEE
VDLNNDILNGRDFGGAVVDTPAIDPAVPQAIALRRNGKPWPRWLAPAEGRATDDVRVPPA
EECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PSARVPSMLSSIAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAAPAIEEGR
CCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCEEEECCCCCCCCHHHHHHCCCHHHHH
AAVEQMLPAIRARLGID
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]