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The map label for this gene is yeeY [H]

Identifier: 91782816

GI number: 91782816

Start: 1585443

End: 1586366

Strand: Direct

Name: yeeY [H]

Synonym: Bxe_A3009

Alternate gene names: 91782816

Gene position: 1585443-1586366 (Clockwise)

Preceding gene: 91782814

Following gene: 91782817

Centisome position: 32.38

GC content: 68.29

Gene sequence:

>924_bases
ATGTTGTCGGAAGACGAACTGGCTCTGCTCGACGCGATCCGTGAGACCGGCAGCCTGTCGCGCGCGGCGGCGCGCCTCGG
CAAGGCGCCCTCCACGGTATCGCATGCCGCCCGGCAACTGGAGACGCGCTTCGACGCGCTGCTGTTCGACCGGCGCCGCT
ACCGCCTGCAACTCACGCCCGCCGGCCAGCTTCTCGCCGATGAAGCCGCGCGTCTGATGCTCGACATGTCGCGCATGACG
CAACGCGTGAAGCAGATCGCGAGCGGGTGGGAAGACCGCCTCTGGATAGTCACGGATGAAATCCTCGAGTTCGAATTGAT
GATGCCGGTGGTGCGCGCGTTCGACGCACTTGGCTCGGGCGTGAAACTGCGCTTCACCCACGAAGTATTGAGCGGCACCT
GGGAGGCGCTGCGCGACGGCCGCGCCGATCTGATCGTGGGCGCGACCAACGAGCCGCCGGCGATTCCCGGCCTGCGCTGG
TTCGAGCTCGGCGTGATGGAGTGGGTGTTCGCGGTGTCGCCGCGCCATCCGCTGGCGGCCGTCGAGGGGCCGCTCGGCCG
CGAGCGGATTCTCGAACATCGCGCGGTGGTGGTGGCAGATTCGTCGCGTACGACGGCGGGGCGTGCTTACGGTCTGATCG
GCGGACAGGCGTCGCTGGCCGTGCCGTCCATGCGCGCGAAAATCCTGGCGCAACGCGACGGCCTGGGCGTGGGGTGGTTG
CCGCGTCAGCGTGTCGCGACGCTGTTGAAGCAGGGCGAACTGATCGAGAAGGCGACCGCCGACCCGCGTGAGCCGAATGT
GCTGTACGTTGCGTGGCGCGGCGATCATGAAGGGCGCGCGTTGCAATGGTGGCTCGAACAGCTGCGGCAGCCGCGGCTTG
CGAAACGCCTCGTGCGCGGCGTGGATATGACGGTCGGCGGGTGA

Upstream 100 bases:

>100_bases
TTGCGCTTAGCCGAAACGCCGCCGCCCTATCGCCATAGTGGACTGGCATTGTCGCTTTGCCGTACCATCTTTGCGTCGAA
CTCGTTCGAAGGAATGGAAC

Downstream 100 bases:

>100_bases
GCCTTGCAGTGGCCGTTGGCGAGTGAGCGGTTTTTTATGCGGGTAGCGCGGCTTCTCGTGGGATCATACGCGCCGTGCTG
GGCGATTCTGCTTTCCGCAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLSEDELALLDAIRETGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRRYRLQLTPAGQLLADEAARLMLDMSRMT
QRVKQIASGWEDRLWIVTDEILEFELMMPVVRAFDALGSGVKLRFTHEVLSGTWEALRDGRADLIVGATNEPPAIPGLRW
FELGVMEWVFAVSPRHPLAAVEGPLGRERILEHRAVVVADSSRTTAGRAYGLIGGQASLAVPSMRAKILAQRDGLGVGWL
PRQRVATLLKQGELIEKATADPREPNVLYVAWRGDHEGRALQWWLEQLRQPRLAKRLVRGVDMTVGG

Sequences:

>Translated_307_residues
MLSEDELALLDAIRETGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRRYRLQLTPAGQLLADEAARLMLDMSRMT
QRVKQIASGWEDRLWIVTDEILEFELMMPVVRAFDALGSGVKLRFTHEVLSGTWEALRDGRADLIVGATNEPPAIPGLRW
FELGVMEWVFAVSPRHPLAAVEGPLGRERILEHRAVVVADSSRTTAGRAYGLIGGQASLAVPSMRAKILAQRDGLGVGWL
PRQRVATLLKQGELIEKATADPREPNVLYVAWRGDHEGRALQWWLEQLRQPRLAKRLVRGVDMTVGG
>Mature_307_residues
MLSEDELALLDAIRETGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRRYRLQLTPAGQLLADEAARLMLDMSRMT
QRVKQIASGWEDRLWIVTDEILEFELMMPVVRAFDALGSGVKLRFTHEVLSGTWEALRDGRADLIVGATNEPPAIPGLRW
FELGVMEWVFAVSPRHPLAAVEGPLGRERILEHRAVVVADSSRTTAGRAYGLIGGQASLAVPSMRAKILAQRDGLGVGWL
PRQRVATLLKQGELIEKATADPREPNVLYVAWRGDHEGRALQWWLEQLRQPRLAKRLVRGVDMTVGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=297, Percent_Identity=35.3535353535354, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1787949, Length=288, Percent_Identity=31.5972222222222, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1786508, Length=293, Percent_Identity=27.3037542662116, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789492, Length=292, Percent_Identity=29.4520547945205, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1786713, Length=283, Percent_Identity=28.6219081272085, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790262, Length=265, Percent_Identity=25.6603773584906, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34164; Mature: 34164

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEDELALLDAIRETGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRRYRLQLTP
CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
AGQLLADEAARLMLDMSRMTQRVKQIASGWEDRLWIVTDEILEFELMMPVVRAFDALGSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC
VKLRFTHEVLSGTWEALRDGRADLIVGATNEPPAIPGLRWFELGVMEWVFAVSPRHPLAA
EEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
VEGPLGRERILEHRAVVVADSSRTTAGRAYGLIGGQASLAVPSMRAKILAQRDGLGVGWL
HCCCCCHHHHHHCCEEEEECCCCCCCCCEEEEECCCCHHCCHHHHHHHHHHCCCCCCCCC
PRQRVATLLKQGELIEKATADPREPNVLYVAWRGDHEGRALQWWLEQLRQPRLAKRLVRG
CHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHH
VDMTVGG
CCCCCCC
>Mature Secondary Structure
MLSEDELALLDAIRETGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRRYRLQLTP
CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
AGQLLADEAARLMLDMSRMTQRVKQIASGWEDRLWIVTDEILEFELMMPVVRAFDALGSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC
VKLRFTHEVLSGTWEALRDGRADLIVGATNEPPAIPGLRWFELGVMEWVFAVSPRHPLAA
EEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
VEGPLGRERILEHRAVVVADSSRTTAGRAYGLIGGQASLAVPSMRAKILAQRDGLGVGWL
HCCCCCHHHHHHCCEEEEECCCCCCCCCEEEEECCCCHHCCHHHHHHHHHHCCCCCCCCC
PRQRVATLLKQGELIEKATADPREPNVLYVAWRGDHEGRALQWWLEQLRQPRLAKRLVRG
CHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHH
VDMTVGG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]