| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is flbA [H]
Identifier: 91782809
GI number: 91782809
Start: 1577882
End: 1579615
Strand: Direct
Name: flbA [H]
Synonym: Bxe_A3016
Alternate gene names: 91782809
Gene position: 1577882-1579615 (Clockwise)
Preceding gene: 91782808
Following gene: 91782810
Centisome position: 32.23
GC content: 63.38
Gene sequence:
>1734_bases ATGAGCAAGCCTGTCAATCTGCCGCAACGGCTGGACCCTATGCTTCGGCAAGCCGTCGCGCTTCAGCAGAACGGCGCATT TGCCGAGGCCGAGGAACTCTATCGCGAGATTCTCGACCTCAAGCCCCGTCATTTCGACGCGCTGCAATTGCTGGGCGCGC TGGCGTTGCAAGCGGGCCGCTTGCAGGAAGGCGTCGAATTACTCAGAAAGGCGCTTGCCGTCAACGCGAAACAGGCGCCG ATCCATTCGAATCTCGCCTATGCATTGAACGCGTTGCAGCGTTTCGACGAAGCACTCGCGAGTGCGGAACGCGCACTGGC CTTGCAGCCCAAATTTCCCGGCGCACTGAACAATCGCGGCAACGCGCAAGCCGGCCTGAACCGGCCGCTCGACGCGCTCG CCAGTTTCGATCGCGCGATTGCGCTGACGCCGGATTTTGCGCAAGCCTGGAACAACCGCGCCTGCGTGCTGCGCGACCTC GGCCGTCCCGCCGATGCGCTCGCCAGTTGTGATCACGCGCTCGCGTTGCAGCCGGCTTATCCCGACGCGTGGAGCAATCG CGGCAACGCATTCAGCGACCTGAACCAGCCGGAAGAAGCGGAACGCAGCTACCGTCGCGCGCTCGAATTGGCCCCGGCAT TTGCTGACGCCTGGAACAACCTCGGCCTCGCGCAGATCGATCTCAATCAGCACGCGCAAGCGCTCTCGAGTTACGAGCGC GCACTCGCCGCGAATCCCGCGGCGGCTGAGACGCATTGGAACGAGTCGCTGTGTCTGTTGCAAATGGGGCGCCTCGAAGC TGGCTGGCAGAAATACGAGTGGCGCTGGGAGCGCAGCCGGATCAAGGCAAGCCGGCGCGTGTTTGCACAGCCTCTTTGGC TGGGGGATTTTTCGATCGGGGGCAAGACGATTCTGTTGCACGCGGAGCAGGGCCTCGGCGACACGCTGCAGTTTTGCCGT TATGCCGCGCTGGTGTCGAAGCTCGGTGCGAAGGTCGTGCTCGAAGTGCCGCCCGAATTGATGCGCCTCATGTCCACGCT CGACGGCGTGGACCAGTTGATCGAAGCCGGCGAGGCGCTGCCGCCGTTCGATTGTCACTGTCCGTTGCTGAGTCTGCCGC TGGCATTCAAAACAGACCTCGATAGCATTCCTTCGGCCACGCCGTATCTCTACGCGCACGCCGAAGCGGCTCGCCAATGG CGCGACCGGATTCACGCGCAAGCAGACACGCACCTGAAAGTCGGACTCGTGTGGGCAGGCGGAAACCGGCCGCATGTCGC GGAACTTCGCAAGAACGATGCGCGCCGTTCGATCGCCTTCGAGCGGCTCGCGCCCATTCTCGACGTGCCCAACGTGCAGT TCTTCAGCCTGCAGAAAGGACCGGCTGCACAGCAGTTGAAAAGCGGCGAGTGGGGTGGCCGCATTGTCGATTACACGGAA GAACTGGACGATTTCGCCGACACCGCGGCCCTGGTGGCGAACCTCGATCTGGTGATTTCCGTGGACACATCCACGGCTCA TCTGGCCGGCGCGCTCGACCGGCCGGTGTGGATTCTGAACCGCTTCGACACCTGCTGGCGCTGGATGCTGGAGCGCACCG ATACGCCGTGGTATCCGGGCGCGAGGCTGTTCAGGCAGCCTGCGCTGGGCGATTGGGATAGTGTGATGCAGGCCGCGCGT GATGCGCTGGCTGCGTTGAGCGCATCGGCTGCGAACGTCACCCATTCCGGATAA
Upstream 100 bases:
>100_bases ATCGGCTTCGCTCTTTCGGGTCCGCCGCGCGCATGATTTCGCACCACACGCACTCCGAAAGCTCCCTTATCTTCACGCGC ATTCGATCGAAGCTGTCCGC
Downstream 100 bases:
>100_bases AGATAGCGCTCCCGCTCCGGCGAATTTACGCGGACGCGCGTAGACTGAACGTCCGTTTATCGACGGTTCAGCCACGGAGA TACATCAATGGAATACAGAC
Product: TPR/sulfotransferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MSKPVNLPQRLDPMLRQAVALQQNGAFAEAEELYREILDLKPRHFDALQLLGALALQAGRLQEGVELLRKALAVNAKQAP IHSNLAYALNALQRFDEALASAERALALQPKFPGALNNRGNAQAGLNRPLDALASFDRAIALTPDFAQAWNNRACVLRDL GRPADALASCDHALALQPAYPDAWSNRGNAFSDLNQPEEAERSYRRALELAPAFADAWNNLGLAQIDLNQHAQALSSYER ALAANPAAAETHWNESLCLLQMGRLEAGWQKYEWRWERSRIKASRRVFAQPLWLGDFSIGGKTILLHAEQGLGDTLQFCR YAALVSKLGAKVVLEVPPELMRLMSTLDGVDQLIEAGEALPPFDCHCPLLSLPLAFKTDLDSIPSATPYLYAHAEAARQW RDRIHAQADTHLKVGLVWAGGNRPHVAELRKNDARRSIAFERLAPILDVPNVQFFSLQKGPAAQQLKSGEWGGRIVDYTE ELDDFADTAALVANLDLVISVDTSTAHLAGALDRPVWILNRFDTCWRWMLERTDTPWYPGARLFRQPALGDWDSVMQAAR DALAALSASAANVTHSG
Sequences:
>Translated_577_residues MSKPVNLPQRLDPMLRQAVALQQNGAFAEAEELYREILDLKPRHFDALQLLGALALQAGRLQEGVELLRKALAVNAKQAP IHSNLAYALNALQRFDEALASAERALALQPKFPGALNNRGNAQAGLNRPLDALASFDRAIALTPDFAQAWNNRACVLRDL GRPADALASCDHALALQPAYPDAWSNRGNAFSDLNQPEEAERSYRRALELAPAFADAWNNLGLAQIDLNQHAQALSSYER ALAANPAAAETHWNESLCLLQMGRLEAGWQKYEWRWERSRIKASRRVFAQPLWLGDFSIGGKTILLHAEQGLGDTLQFCR YAALVSKLGAKVVLEVPPELMRLMSTLDGVDQLIEAGEALPPFDCHCPLLSLPLAFKTDLDSIPSATPYLYAHAEAARQW RDRIHAQADTHLKVGLVWAGGNRPHVAELRKNDARRSIAFERLAPILDVPNVQFFSLQKGPAAQQLKSGEWGGRIVDYTE ELDDFADTAALVANLDLVISVDTSTAHLAGALDRPVWILNRFDTCWRWMLERTDTPWYPGARLFRQPALGDWDSVMQAAR DALAALSASAANVTHSG >Mature_576_residues SKPVNLPQRLDPMLRQAVALQQNGAFAEAEELYREILDLKPRHFDALQLLGALALQAGRLQEGVELLRKALAVNAKQAPI HSNLAYALNALQRFDEALASAERALALQPKFPGALNNRGNAQAGLNRPLDALASFDRAIALTPDFAQAWNNRACVLRDLG RPADALASCDHALALQPAYPDAWSNRGNAFSDLNQPEEAERSYRRALELAPAFADAWNNLGLAQIDLNQHAQALSSYERA LAANPAAAETHWNESLCLLQMGRLEAGWQKYEWRWERSRIKASRRVFAQPLWLGDFSIGGKTILLHAEQGLGDTLQFCRY AALVSKLGAKVVLEVPPELMRLMSTLDGVDQLIEAGEALPPFDCHCPLLSLPLAFKTDLDSIPSATPYLYAHAEAARQWR DRIHAQADTHLKVGLVWAGGNRPHVAELRKNDARRSIAFERLAPILDVPNVQFFSLQKGPAAQQLKSGEWGGRIVDYTEE LDDFADTAALVANLDLVISVDTSTAHLAGALDRPVWILNRFDTCWRWMLERTDTPWYPGARLFRQPALGDWDSVMQAARD ALAALSASAANVTHSG
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=179, Percent_Identity=37.9888268156425, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI32307148, Length=179, Percent_Identity=37.9888268156425, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI118766328, Length=237, Percent_Identity=30.379746835443, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI118766330, Length=237, Percent_Identity=30.379746835443, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI224809432, Length=215, Percent_Identity=28.3720930232558, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI301336134, Length=259, Percent_Identity=27.4131274131274, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI83415184, Length=259, Percent_Identity=27.4131274131274, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115532692, Length=204, Percent_Identity=29.9019607843137, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115532690, Length=204, Percent_Identity=29.9019607843137, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25147174, Length=220, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193210476, Length=250, Percent_Identity=25.6, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI17647755, Length=279, Percent_Identity=28.673835125448, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24585827, Length=279, Percent_Identity=28.673835125448, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24585829, Length=279, Percent_Identity=28.673835125448, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24647123, Length=227, Percent_Identity=30.3964757709251, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24656717, Length=230, Percent_Identity=26.5217391304348, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI18110006, Length=230, Percent_Identity=26.5217391304348, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63662; Mature: 63531
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPVNLPQRLDPMLRQAVALQQNGAFAEAEELYREILDLKPRHFDALQLLGALALQAGR CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LQEGVELLRKALAVNAKQAPIHSNLAYALNALQRFDEALASAERALALQPKFPGALNNRG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC NAQAGLNRPLDALASFDRAIALTPDFAQAWNNRACVLRDLGRPADALASCDHALALQPAY CCCCCCCCCHHHHHHCCCEEEECCHHHHHCCCCEEEHHHCCCCHHHHHCCCCCEEECCCC PDAWSNRGNAFSDLNQPEEAERSYRRALELAPAFADAWNNLGLAQIDLNQHAQALSSYER CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH ALAANPAAAETHWNESLCLLQMGRLEAGWQKYEWRWERSRIKASRRVFAQPLWLGDFSIG HHHCCCCHHCCCCCCCHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC GKTILLHAEQGLGDTLQFCRYAALVSKLGAKVVLEVPPELMRLMSTLDGVDQLIEAGEAL CEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCC PPFDCHCPLLSLPLAFKTDLDSIPSATPYLYAHAEAARQWRDRIHAQADTHLKVGLVWAG CCCCCCCCHHHCCCHHHCCHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEC GNRPHVAELRKNDARRSIAFERLAPILDVPNVQFFSLQKGPAAQQLKSGEWGGRIVDYTE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCEEECHHH ELDDFADTAALVANLDLVISVDTSTAHLAGALDRPVWILNRFDTCWRWMLERTDTPWYPG HHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC ARLFRQPALGDWDSVMQAARDALAALSASAANVTHSG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKPVNLPQRLDPMLRQAVALQQNGAFAEAEELYREILDLKPRHFDALQLLGALALQAGR CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LQEGVELLRKALAVNAKQAPIHSNLAYALNALQRFDEALASAERALALQPKFPGALNNRG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC NAQAGLNRPLDALASFDRAIALTPDFAQAWNNRACVLRDLGRPADALASCDHALALQPAY CCCCCCCCCHHHHHHCCCEEEECCHHHHHCCCCEEEHHHCCCCHHHHHCCCCCEEECCCC PDAWSNRGNAFSDLNQPEEAERSYRRALELAPAFADAWNNLGLAQIDLNQHAQALSSYER CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH ALAANPAAAETHWNESLCLLQMGRLEAGWQKYEWRWERSRIKASRRVFAQPLWLGDFSIG HHHCCCCHHCCCCCCCHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC GKTILLHAEQGLGDTLQFCRYAALVSKLGAKVVLEVPPELMRLMSTLDGVDQLIEAGEAL CEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCC PPFDCHCPLLSLPLAFKTDLDSIPSATPYLYAHAEAARQWRDRIHAQADTHLKVGLVWAG CCCCCCCCHHHCCCHHHCCHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEC GNRPHVAELRKNDARRSIAFERLAPILDVPNVQFFSLQKGPAAQQLKSGEWGGRIVDYTE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCEEECHHH ELDDFADTAALVANLDLVISVDTSTAHLAGALDRPVWILNRFDTCWRWMLERTDTPWYPG HHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC ARLFRQPALGDWDSVMQAARDALAALSASAANVTHSG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]