| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782808
Identifier: 91782808
GI number: 91782808
Start: 1577117
End: 1577680
Strand: Direct
Name: 91782808
Synonym: Bxe_A3017
Alternate gene names: NA
Gene position: 1577117-1577680 (Clockwise)
Preceding gene: 91782806
Following gene: 91782809
Centisome position: 32.21
GC content: 65.96
Gene sequence:
>564_bases ATGATCCGCTTGCCTCTCGCCACCCTCGCCAGTGCCTGTGCGGCTGGTCTGTTCGTCGCCGCCACCGCGGCCAGCGCGCA AACCGCTCCTGCGGCGCCCGCTGCGGACGCCGGCCGTTTGCATGCCGCCGACCAGACATTCATCGCGGACGGCACCAAAG CCGTCGCGACGCAACGCGACGCCGCGCGCCTCGCCACCTCGCGCTCGACGGACCGCGACGTCAAGGCTTTCGCCGAACGC GTTTCGACCGATAACGCGAAAATCTCCGACGCGCTGCGCGCGGCGAGCCCGCGCGGTGTCGACGTGCCGAAAAACGATCC CGACGCGGCCGTGATCGCGAGCATCAACAACCTGCGTGGCGCCGACTTCGACAAGGCCTATATCGAACAGGTCGCGCTCG CCGGCGAACAGAAAGCACTGTCGGCATTCCAGGCGGAAATCGCTTCGGGCCGCGACGAGCAGTTGAAGGATGCGGCAAAG AAGGCGTTGCCGACTATCCAGGAGCATTACGCGATGGCGCAGGATCTCGCTAAGCGCAAGCATCTATCCAGCACGGCGCA ATAA
Upstream 100 bases:
>100_bases CAGGGGCTTGCAAGCTGGTTGCAAGGTATCCGCGCAGTGAGCACGGTCCCCGAGGCGCACACGCGTTGCCGTCGTTTCGC TTCCACCTCAAGGAGAACGT
Downstream 100 bases:
>100_bases GCAGCAAGCAGCAAGCAGCAAGCAGTAGACAGCAAGCGCTTCGACACGCGTCACGCCGCGGCGTGACGCGTGTCAGATCA AATGCGCAGTTTTCGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MIRLPLATLASACAAGLFVAATAASAQTAPAAPAADAGRLHAADQTFIADGTKAVATQRDAARLATSRSTDRDVKAFAER VSTDNAKISDALRAASPRGVDVPKNDPDAAVIASINNLRGADFDKAYIEQVALAGEQKALSAFQAEIASGRDEQLKDAAK KALPTIQEHYAMAQDLAKRKHLSSTAQ
Sequences:
>Translated_187_residues MIRLPLATLASACAAGLFVAATAASAQTAPAAPAADAGRLHAADQTFIADGTKAVATQRDAARLATSRSTDRDVKAFAER VSTDNAKISDALRAASPRGVDVPKNDPDAAVIASINNLRGADFDKAYIEQVALAGEQKALSAFQAEIASGRDEQLKDAAK KALPTIQEHYAMAQDLAKRKHLSSTAQ >Mature_187_residues MIRLPLATLASACAAGLFVAATAASAQTAPAAPAADAGRLHAADQTFIADGTKAVATQRDAARLATSRSTDRDVKAFAER VSTDNAKISDALRAASPRGVDVPKNDPDAAVIASINNLRGADFDKAYIEQVALAGEQKALSAFQAEIASGRDEQLKDAAK KALPTIQEHYAMAQDLAKRKHLSSTAQ
Specific function: Unknown
COG id: COG3652
COG function: function code S; Predicted outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19426; Mature: 19426
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLPLATLASACAAGLFVAATAASAQTAPAAPAADAGRLHAADQTFIADGTKAVATQRD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH AARLATSRSTDRDVKAFAERVSTDNAKISDALRAASPRGVDVPKNDPDAAVIASINNLRG HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC ADFDKAYIEQVALAGEQKALSAFQAEIASGRDEQLKDAAKKALPTIQEHYAMAQDLAKRK CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLSSTAQ HHHHCCC >Mature Secondary Structure MIRLPLATLASACAAGLFVAATAASAQTAPAAPAADAGRLHAADQTFIADGTKAVATQRD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH AARLATSRSTDRDVKAFAERVSTDNAKISDALRAASPRGVDVPKNDPDAAVIASINNLRG HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC ADFDKAYIEQVALAGEQKALSAFQAEIASGRDEQLKDAAKKALPTIQEHYAMAQDLAKRK CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLSSTAQ HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA