| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91782704
Identifier: 91782704
GI number: 91782704
Start: 1480908
End: 1481705
Strand: Direct
Name: 91782704
Synonym: Bxe_A3121
Alternate gene names: NA
Gene position: 1480908-1481705 (Clockwise)
Preceding gene: 91782703
Following gene: 91782705
Centisome position: 30.25
GC content: 64.91
Gene sequence:
>798_bases GTGGGCGAGCCGCGAACTCGCGCGCTTTCTCTCGCACGTATTCACCTATATTGCAGCGGGGCGTCTGCATTGAGCATGGA AACCATCCGCTATATCGAAGGCTTTGCGTTCTGCACGATCCGGCCGGCCGTGGCGCTTAGCCTGGTTCCATTCAACCAGG GCGGCTCGGTGGGGATCGTGTTGCGGCTGCCGCTCATGATCGCGATCGCCATGCTGCCGCAGCAGGTGGGCTGGCCGCCG CACCTGTGGGCGGGGATGTTCTTCGAAATGGCGACCGGCGCTGTACTGGGGTTGCTGCTCGGCACGATCTTTCACGCGGC GGGAGCCGCCGGTGCCGTGCTCGACCAGCAGGGCGGCTACACGAGCGCCGCGATCTACGACCCGAACTTCCAGCAGGAGG CGGCGCTGTTCGAAAGCCTGTTTCTGCAATTCGCCGCGTTGACGTTGTTCACGGGGCCGGGTTTGCCGCTGCTGTACGGT TTCTTTACGGATGCGTGGGTGCTGTGGCCTCCCGGGCGCTGGCGCGGCGATCTGGTCGACGTGTTCGGGCAGCTTGCGCA ACGCAATCTCGCGGACTCCCTGACCGAGGGTCTGCGTCTCGCGAGTCCGTTGCTCGGCCTCGTGCTGCTGGTGGACATCG CATTCGGCCTGATGTCGCGGCATGCGAAGCGCCTCAATCCGTTTGCGACCGCGCGCACCGTGAAAGCCGCGGTGCTGACG TTCGCCGCCGTGCTCAGCGTGCCTGCGCTGTTCGCGCAGTTGCGCCTCGCATTCGATCACGTGATCCATTTGCGATGA
Upstream 100 bases:
>100_bases TGATCGGGCTGCTGCAGTCGGTCACGCAGATCCAGGATCAGAGCCTGCCGTATGGCGCGAAGATCATCTGCGTGGGCTTC GTGCTGATCGTCACCGCGCC
Downstream 100 bases:
>100_bases GCGACAAAAGCGAAGCGCCCACCCCCAGGCGGATCCGCCGCGCGCGCGCGGACGGCGAGATCGCGAAGAGCGTGCATCTG ACTGTGGCGTTCAGCGGCCT
Product: putative type III secretion system innermembrane protein, HcrT/YscT-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGEPRTRALSLARIHLYCSGASALSMETIRYIEGFAFCTIRPAVALSLVPFNQGGSVGIVLRLPLMIAIAMLPQQVGWPP HLWAGMFFEMATGAVLGLLLGTIFHAAGAAGAVLDQQGGYTSAAIYDPNFQQEAALFESLFLQFAALTLFTGPGLPLLYG FFTDAWVLWPPGRWRGDLVDVFGQLAQRNLADSLTEGLRLASPLLGLVLLVDIAFGLMSRHAKRLNPFATARTVKAAVLT FAAVLSVPALFAQLRLAFDHVIHLR
Sequences:
>Translated_265_residues MGEPRTRALSLARIHLYCSGASALSMETIRYIEGFAFCTIRPAVALSLVPFNQGGSVGIVLRLPLMIAIAMLPQQVGWPP HLWAGMFFEMATGAVLGLLLGTIFHAAGAAGAVLDQQGGYTSAAIYDPNFQQEAALFESLFLQFAALTLFTGPGLPLLYG FFTDAWVLWPPGRWRGDLVDVFGQLAQRNLADSLTEGLRLASPLLGLVLLVDIAFGLMSRHAKRLNPFATARTVKAAVLT FAAVLSVPALFAQLRLAFDHVIHLR >Mature_264_residues GEPRTRALSLARIHLYCSGASALSMETIRYIEGFAFCTIRPAVALSLVPFNQGGSVGIVLRLPLMIAIAMLPQQVGWPPH LWAGMFFEMATGAVLGLLLGTIFHAAGAAGAVLDQQGGYTSAAIYDPNFQQEAALFESLFLQFAALTLFTGPGLPLLYGF FTDAWVLWPPGRWRGDLVDVFGQLAQRNLADSLTEGLRLASPLLGLVLLVDIAFGLMSRHAKRLNPFATARTVKAAVLTF AAVLSVPALFAQLRLAFDHVIHLR
Specific function: Unknown
COG id: COG4791
COG function: function code U; Type III secretory pathway, component EscT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28594; Mature: 28463
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPRTRALSLARIHLYCSGASALSMETIRYIEGFAFCTIRPAVALSLVPFNQGGSVGIV CCCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHEEECHHHEEEEEECCCCCCEEHH LRLPLMIAIAMLPQQVGWPPHLWAGMFFEMATGAVLGLLLGTIFHAAGAAGAVLDQQGGY HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCC TSAAIYDPNFQQEAALFESLFLQFAALTLFTGPGLPLLYGFFTDAWVLWPPGRWRGDLVD EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHH VFGQLAQRNLADSLTEGLRLASPLLGLVLLVDIAFGLMSRHAKRLNPFATARTVKAAVLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FAAVLSVPALFAQLRLAFDHVIHLR HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GEPRTRALSLARIHLYCSGASALSMETIRYIEGFAFCTIRPAVALSLVPFNQGGSVGIV CCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHEEECHHHEEEEEECCCCCCEEHH LRLPLMIAIAMLPQQVGWPPHLWAGMFFEMATGAVLGLLLGTIFHAAGAAGAVLDQQGGY HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCC TSAAIYDPNFQQEAALFESLFLQFAALTLFTGPGLPLLYGFFTDAWVLWPPGRWRGDLVD EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHH VFGQLAQRNLADSLTEGLRLASPLLGLVLLVDIAFGLMSRHAKRLNPFATARTVKAAVLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FAAVLSVPALFAQLRLAFDHVIHLR HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA