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The map label for this gene is ompR [H]

Identifier: 91782444

GI number: 91782444

Start: 1189066

End: 1189791

Strand: Direct

Name: ompR [H]

Synonym: Bxe_A3387

Alternate gene names: 91782444

Gene position: 1189066-1189791 (Clockwise)

Preceding gene: 91782442

Following gene: 91782445

Centisome position: 24.29

GC content: 66.12

Gene sequence:

>726_bases
ATGGCTACTCAAATACTTGTTGTCGACGACGACGTCGAATTGCGCGACCTGCTGCGCGACTATCTGGCCCGCCAGGGGAT
CGAGGTTTCGGTGCTGCACGACGCGGGCTCGCTCGAACGGCGGCTCGAACGCGAGCGCCCGGATCTGATCGTGCTCGACC
TGATGATGCCCGGCGTCGACGGGCTCACGGCGCTGCGCAAGCTGCGCGCGTCGGGCGACGACATCCCCGTGATCATGCTC
ACGGCGCGTGCGGACGACGTCGACCGCATTGTCGGATTGGAGCTAGGCGCGGACGACTACCTCGGCAAGCCGTTCAATCC
GCGCGAGTTGCTGGCGCGCGTGCAGGCCGTGCTGCGCCGCCGCCGCACGCTGCCGTCCGCGGCAGCGCCGGAGCAGCGCG
AGCCGTTCAATTTCGGCCGCTTCACGCTGGACTTCCAGTCGCGCACGCTGCATCTGGAAGACAAGCCGCTCACGTTGTCG
GGCAGCGAATTCGCATTGCTGAAGATTTTCGTCAATCACCCCATGCGCACACTCACGCGCGAGCGCCTGCTCGAACTGCT
GCACGGTCCGGAATACGACGGCACCGACCGCGGCATCGACGTACAGGTCTGGCGTCTGCGCCGCATTCTCGAAACCGACC
CGTCCACGCCGCGCTTCATTCAAACCGTGCGCGGCCGCGGCTACGTGTTCGTGCCAGACGGCGAACAGCATGCGTCGGCC
CATTGA

Upstream 100 bases:

>100_bases
GTTACGGCGGATTACGCACAGCTTTCACCGTAACACCCGGTAACCCTTGGGGCCGGTTTGAAATCCAAAACCCTTCCTGC
TGCGCGTTAAACTTCATCTC

Downstream 100 bases:

>100_bases
TTCGCTGTTCGGGCGGCTGGCGCTGCTAGTCGTCGCGGTATTGCTGCTGTCGCATTTCGCGTGGTACGCGCTCATGCGCC
TCGAGCGCAGTCAACTGCAA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MATQILVVDDDVELRDLLRDYLARQGIEVSVLHDAGSLERRLERERPDLIVLDLMMPGVDGLTALRKLRASGDDIPVIML
TARADDVDRIVGLELGADDYLGKPFNPRELLARVQAVLRRRRTLPSAAAPEQREPFNFGRFTLDFQSRTLHLEDKPLTLS
GSEFALLKIFVNHPMRTLTRERLLELLHGPEYDGTDRGIDVQVWRLRRILETDPSTPRFIQTVRGRGYVFVPDGEQHASA
H

Sequences:

>Translated_241_residues
MATQILVVDDDVELRDLLRDYLARQGIEVSVLHDAGSLERRLERERPDLIVLDLMMPGVDGLTALRKLRASGDDIPVIML
TARADDVDRIVGLELGADDYLGKPFNPRELLARVQAVLRRRRTLPSAAAPEQREPFNFGRFTLDFQSRTLHLEDKPLTLS
GSEFALLKIFVNHPMRTLTRERLLELLHGPEYDGTDRGIDVQVWRLRRILETDPSTPRFIQTVRGRGYVFVPDGEQHASA
H
>Mature_240_residues
ATQILVVDDDVELRDLLRDYLARQGIEVSVLHDAGSLERRLERERPDLIVLDLMMPGVDGLTALRKLRASGDDIPVIMLT
ARADDVDRIVGLELGADDYLGKPFNPRELLARVQAVLRRRRTLPSAAAPEQREPFNFGRFTLDFQSRTLHLEDKPLTLSG
SEFALLKIFVNHPMRTLTRERLLELLHGPEYDGTDRGIDVQVWRLRRILETDPSTPRFIQTVRGRGYVFVPDGEQHASAH

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=53.6170212765957, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI1786599, Length=232, Percent_Identity=40.5172413793103, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=37.7682403433476, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=35.5932203389831, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=35.6223175965665, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI2367329, Length=236, Percent_Identity=40.2542372881356, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=34.6153846153846, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=34.8214285714286, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786911, Length=233, Percent_Identity=36.480686695279, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786784, Length=233, Percent_Identity=36.0515021459227, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=36.5638766519824, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=30.5309734513274, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=32.3144104803493, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790552, Length=233, Percent_Identity=32.618025751073, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790299, Length=133, Percent_Identity=31.5789473684211, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=34.1880341880342, Blast_Score=70, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6322000, Length=166, Percent_Identity=29.5180722891566, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27437; Mature: 27306

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQILVVDDDVELRDLLRDYLARQGIEVSVLHDAGSLERRLERERPDLIVLDLMMPGVD
CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCH
GLTALRKLRASGDDIPVIMLTARADDVDRIVGLELGADDYLGKPFNPRELLARVQAVLRR
HHHHHHHHHCCCCCCEEEEEEECCCCHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
RRTLPSAAAPEQREPFNFGRFTLDFQSRTLHLEDKPLTLSGSEFALLKIFVNHPMRTLTR
HHCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEECCCCEEEEHHHHHCCHHHHHH
ERLLELLHGPEYDGTDRGIDVQVWRLRRILETDPSTPRFIQTVRGRGYVFVPDGEQHASA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCCCC
H
C
>Mature Secondary Structure 
ATQILVVDDDVELRDLLRDYLARQGIEVSVLHDAGSLERRLERERPDLIVLDLMMPGVD
CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCH
GLTALRKLRASGDDIPVIMLTARADDVDRIVGLELGADDYLGKPFNPRELLARVQAVLRR
HHHHHHHHHCCCCCCEEEEEEECCCCHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
RRTLPSAAAPEQREPFNFGRFTLDFQSRTLHLEDKPLTLSGSEFALLKIFVNHPMRTLTR
HHCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEECCCCEEEEHHHHHCCHHHHHH
ERLLELLHGPEYDGTDRGIDVQVWRLRRILETDPSTPRFIQTVRGRGYVFVPDGEQHASA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]