| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yhhW [C]
Identifier: 91782442
GI number: 91782442
Start: 1187438
End: 1188148
Strand: Direct
Name: yhhW [C]
Synonym: Bxe_A3389
Alternate gene names: 91782442
Gene position: 1187438-1188148 (Clockwise)
Preceding gene: 91782436
Following gene: 91782444
Centisome position: 24.25
GC content: 64.84
Gene sequence:
>711_bases ATGTTCGAGATTCGCCGCTCGCACGAACGCGGCCACGCCAACCACGGCTGGCTCGACTCGTATCACAGCTTTTCGTTTGC CGACTATCGCGATCCCCAGCACGTTCATTTCGGTCCGCTGCGGGTCATCAACGAAGACCGGATCGCCGGCGGCCAGGGTT TCGGCACACATGGCCATCGCGATATGGAAATCGTCACGTATGTGCTCGAAGGCGCGCTGGCTCACCGTGACAGCATGGGC AACGGCTCGACCATCCGTCCCGGCGACGTGCAGCGCATGAGCGCCGGCACGGGCGTGCAGCACAGCGAGTTCAACGCATC GCAGGATGAACCCGTGCATCTGCTGCAGATCTGGGTGATTCCGCAACGCGCGGGCGACCAGCCGGGCTATGAGGAAAAAC GCTTCGACGCCGTCGACAAGCGCGGCCGCCTGCGCGTGGTCGCTTCGCCCGATGGCCGCGAGGGCTCGGTGACGATCCAT GCGGATGCGTCGATTTACGCGGCGCTGATCGACGGCGCGGAAACGGCCACGTTCGCGCTGCCCAAAGGACGGCTCGCCTA TGTGCACATAGCGCGCGGCGCGGTGACGGTAAACGGCGAGGCGCTCCAGGCGGGCGACGCCGCGAGGCTCAGCGACACGG ATACGGTGACGCTGGAGAAGGGTGAGAACGCTGAAGTGCTGCTGTTCGATCTGGGTCAACTCAACGGCTAG
Upstream 100 bases:
>100_bases TGATTGATGAAACGATCCGGTGCGCCTGTGCCGATTGTCTTGCGCAACCCGTGCCCATACATTGCCTGCATCGCTATTTA TTCCCCGGAGTCCCACCATC
Downstream 100 bases:
>100_bases GCCGGAATTCGCCGGCGACGTGCTTCGTTGTTCCAGAAGGAAAGGTTGAACGCGCAACGAGCACGCCGCGTAACAAAAAA AACGCCACGGAAGGAAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MFEIRRSHERGHANHGWLDSYHSFSFADYRDPQHVHFGPLRVINEDRIAGGQGFGTHGHRDMEIVTYVLEGALAHRDSMG NGSTIRPGDVQRMSAGTGVQHSEFNASQDEPVHLLQIWVIPQRAGDQPGYEEKRFDAVDKRGRLRVVASPDGREGSVTIH ADASIYAALIDGAETATFALPKGRLAYVHIARGAVTVNGEALQAGDAARLSDTDTVTLEKGENAEVLLFDLGQLNG
Sequences:
>Translated_236_residues MFEIRRSHERGHANHGWLDSYHSFSFADYRDPQHVHFGPLRVINEDRIAGGQGFGTHGHRDMEIVTYVLEGALAHRDSMG NGSTIRPGDVQRMSAGTGVQHSEFNASQDEPVHLLQIWVIPQRAGDQPGYEEKRFDAVDKRGRLRVVASPDGREGSVTIH ADASIYAALIDGAETATFALPKGRLAYVHIARGAVTVNGEALQAGDAARLSDTDTVTLEKGENAEVLLFDLGQLNG >Mature_236_residues MFEIRRSHERGHANHGWLDSYHSFSFADYRDPQHVHFGPLRVINEDRIAGGQGFGTHGHRDMEIVTYVLEGALAHRDSMG NGSTIRPGDVQRMSAGTGVQHSEFNASQDEPVHLLQIWVIPQRAGDQPGYEEKRFDAVDKRGRLRVVASPDGREGSVTIH ADASIYAALIDGAETATFALPKGRLAYVHIARGAVTVNGEALQAGDAARLSDTDTVTLEKGENAEVLLFDLGQLNG
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=200, Percent_Identity=27.5, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4505823, Length=200, Percent_Identity=27.5, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=47.1861471861472, Blast_Score=236, Evalue=7e-64, Organism=Escherichia coli, GI1789493, Length=237, Percent_Identity=31.2236286919831, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25763; Mature: 25763
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEIRRSHERGHANHGWLDSYHSFSFADYRDPQHVHFGPLRVINEDRIAGGQGFGTHGHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCC DMEIVTYVLEGALAHRDSMGNGSTIRPGDVQRMSAGTGVQHSEFNASQDEPVHLLQIWVI CHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEE PQRAGDQPGYEEKRFDAVDKRGRLRVVASPDGREGSVTIHADASIYAALIDGAETATFAL ECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCEEEEEC PKGRLAYVHIARGAVTVNGEALQAGDAARLSDTDTVTLEKGENAEVLLFDLGQLNG CCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure MFEIRRSHERGHANHGWLDSYHSFSFADYRDPQHVHFGPLRVINEDRIAGGQGFGTHGHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCC DMEIVTYVLEGALAHRDSMGNGSTIRPGDVQRMSAGTGVQHSEFNASQDEPVHLLQIWVI CHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEE PQRAGDQPGYEEKRFDAVDKRGRLRVVASPDGREGSVTIHADASIYAALIDGAETATFAL ECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCEEEEEC PKGRLAYVHIARGAVTVNGEALQAGDAARLSDTDTVTLEKGENAEVLLFDLGQLNG CCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]