| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782422
Identifier: 91782422
GI number: 91782422
Start: 1165577
End: 1166767
Strand: Direct
Name: 91782422
Synonym: Bxe_A3409
Alternate gene names: NA
Gene position: 1165577-1166767 (Clockwise)
Preceding gene: 91782421
Following gene: 91782425
Centisome position: 23.81
GC content: 64.15
Gene sequence:
>1191_bases ATGGCGATCCGGGGACTTCTATGGCTTGCGTTGCTGTTCGTCATCGCGGTGGTGCTGGCGGTGGTGGGACGCTTCGACAT GGGCCAGGTGCTGCTGATCTATCCGCCGTACCGCGTGGACATGTCATTGAATCTGTTCGTGGTCGGGCTGGTGGTGCTGT TCATTCTGCTGTACGCGCTGCTGCGCATCTTCCGCAATATCTGGCGCATGCCGCAGCGCGTAGCCGCGTATCGCGCGCGT TCGCGTGTCGCGAAGGCGCATGCCGCGCTGCGTGACGCGATCGGCAATCTGTACGCGGGGCGTTTTTCGCGCGCTGAAAA AGCCGCCAAAGACGCACTCGCGAACGGCGACAACAAGGGCGCGGCCGGTTTGATCGCCGCCACCGCCGCGCACCGCATGC ATGAATATGCGCGACGCGACGAATGGCTCGCGCAGATCAAGGAAGCCGACTGGCAGGACGCCCGCCTGATGGCCACCGCC GACATGCGTGCCGACGGCCGCGACGCGGACGGCGCGCTGGCCGCGCTGACCGAAATGCAGTCGCAAGGCGCGCGGCGGAT TCACGCGCAGCAGATCACGTTGCGCGCGCAACAGCAGTTGAAGAACTGGGGCGAGGTGCTCAAGCTCGTCAAGACGCTGG AAAAACGCGAAGCGATTCATCCGGCCGTGGCGGTGCGCTTGCGTCAGATCGCGGCGGAAAACCTGTTGCGTGACCGGCGC CACAATGCCGACGCGCTGCTGGAGTTGTGGAATTCGCTGTCGGCCACCGAACGCCATTCGCCGCGTCTCGCGGATCTCGC CGCCGAGTTGCTGGTGGCGCTGAACCGTCCGCAGGAAGCGCGCAAGATCGTCGAGGAAGCGCTGGCGCAAAACTGGGACG CGCGTTTGCTGCGCCGCTATCCGGATACGGCGGGCGGCGACGCGTTGCCGCTGATTCAGAAGGCCGAAGCGTGGCAGAAG GATCGTCCGGAAGATGCGGACCTGATGTTCGCGCTGGGCCGCTTGTGCCTGCATCAGCAACTGTGGGGCAAGGCGCAATC GTTCCTCGAACGCGCGCTGAAACTCGCGGACAACGAGACGCTGAAGATTCGCTCGCATCGCGCGTTGGCGCGTTTGCATG AACAGCTCGGCGATACGGAGAAGGCGAGCCAGCATTATCGCGAGAGTGCGTTGGCGATGAATATTGTTTGA
Upstream 100 bases:
>100_bases ATCTCGTCAAGCAGGTGCAGGCGGGCTCGGCCGCGGTTGAGCTGCCGAATCTGAACACGAGCCTGCAGGCCGTCAATCAA TACCGGAGCCGGGGTTAATC
Downstream 100 bases:
>100_bases GGGTTTTTGGGGCGGCGTGTTTGTTCTTGGTGCGCTGCTTTGAGAGATTGAGGCGGCTGGGTTTAGTTCATGAGTTGATG TGTTGATGGCCGCAGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: HemY Protein; HemY Domain-Containing Protein; Protein Porphyrin Biosynthesis; HemY-Like; HemY-Like Protein; HemY N-Terminal; Protoheme Ix Synthesis Protein; Porphyrin Biosynthesis Protein; HemY N-Terminal Domain Protein; Protoheme IX Synthesis Protein; HemY N-Terminal Domain-Containing Protein; Metal Dependent Phosphohydrolase; HemY Protein N-Terminus Family Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAIRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLRIFRNIWRMPQRVAAYRAR SRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAAGLIAATAAHRMHEYARRDEWLAQIKEADWQDARLMATA DMRADGRDADGALAALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRLRQIAAENLLRDRR HNADALLELWNSLSATERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQK DRPEDADLMFALGRLCLHQQLWGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESALAMNIV
Sequences:
>Translated_396_residues MAIRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLRIFRNIWRMPQRVAAYRAR SRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAAGLIAATAAHRMHEYARRDEWLAQIKEADWQDARLMATA DMRADGRDADGALAALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRLRQIAAENLLRDRR HNADALLELWNSLSATERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQK DRPEDADLMFALGRLCLHQQLWGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESALAMNIV >Mature_395_residues AIRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLRIFRNIWRMPQRVAAYRARS RVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAAGLIAATAAHRMHEYARRDEWLAQIKEADWQDARLMATAD MRADGRDADGALAALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRLRQIAAENLLRDRRH NADALLELWNSLSATERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKD RPEDADLMFALGRLCLHQQLWGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESALAMNIV
Specific function: Unknown
COG id: COG3071
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44629; Mature: 44498
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYAL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHHHHHH LRIFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AAGLIAATAAHRMHEYARRDEWLAQIKEADWQDARLMATADMRADGRDADGALAALTEMQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHH SQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRLRQIAAENLLRDRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HNADALLELWNSLSATERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRY CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC PDTAGGDALPLIQKAEAWQKDRPEDADLMFALGRLCLHQQLWGKAQSFLERALKLADNET CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LKIRSHRALARLHEQLGDTEKASQHYRESALAMNIV EEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYAL CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHHHHHH LRIFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AAGLIAATAAHRMHEYARRDEWLAQIKEADWQDARLMATADMRADGRDADGALAALTEMQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHH SQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRLRQIAAENLLRDRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HNADALLELWNSLSATERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRY CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC PDTAGGDALPLIQKAEAWQKDRPEDADLMFALGRLCLHQQLWGKAQSFLERALKLADNET CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LKIRSHRALARLHEQLGDTEKASQHYRESALAMNIV EEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA