| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is map [H]
Identifier: 91782404
GI number: 91782404
Start: 1145907
End: 1146692
Strand: Direct
Name: map [H]
Synonym: Bxe_A3427
Alternate gene names: 91782404
Gene position: 1145907-1146692 (Clockwise)
Preceding gene: 91782401
Following gene: 91782405
Centisome position: 23.41
GC content: 63.36
Gene sequence:
>786_bases ATGGCCATTACCTACAAGACTCCCGACGACATCGCCAGGCTGCGCATTTCGGGCCGCCTCGCGGCCGACGTGCTGGCGAT GATCGGCGAGCACATCAAGGCCGGTGTCTCCACTGAAGAGCTGGACGCACTGTGCAACGACTACATCGTCAATACGCAAA AGTCGATTCCGGCAAATGTCGGCTATCTGGGATTTCCGAAGACTATCTGCACGTCGGTCAACTCGGTGGTGTGCCACGGC ATCCCCAATCGCGGCGAAGTCCTGAAAGACGGCGACATCATCAATATCGACGTGGCGATCATCAAGGACGGCTACTTCGG CGACACGAGCCGCATGTATTGCGTCGGCCAGCCGAGTACGGTGGCGCGCCAGCTGATCGACACGACCTATGAAGCGATGC TCGCCGGCATCCGCGAAGTGAAGCCAGGCGCAACGCTCGGCGACGTGGGCCATGCGATCCAGAAGATCGCGCAGCGCGAC GGCTTCTCGATCGTGCGCGACTATTGCGGGCACGGTATCGGCAAGGTCTACCACGAAGAGCCGCAGGTGCTGCATTACGG CCAGCCGGGGCAGGGCGTGCGCCTGAAGCCGGGCATGGTCTTCACGATCGAGCCGATGATCAACGCCGGCCGCGCCGGCA CCACGGTGCTGCGCGACGGCTGGACCGTGGTCACCAAAGACCGCTCGCTGTCGGCGCAATGGGAACACATGGTCGCCGTC ACCGACGAGGGCTATGAGCTGCTGACGCCGTGGCCGGACGGCACCGGCCGCTACGAAGCGCCTTGA
Upstream 100 bases:
>100_bases AAGAATGGCGCGGTTTGCGCAAGCCTCGCGGCGATCCTCTGTACAATTGGCCGATCGATTGAACATCGACTTTCCTATTC GACCCACATCGACCGAATTC
Downstream 100 bases:
>100_bases GCGTGCAAAGGGCGCGCTGCCCGCGGCTGCATCTGCCGCCCGGCGGGCGCGCGAAATGCTGCTGAGTCTGCGTGCGCTCC GTGCGTGGTTCCACAATCCG
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MAITYKTPDDIARLRISGRLAADVLAMIGEHIKAGVSTEELDALCNDYIVNTQKSIPANVGYLGFPKTICTSVNSVVCHG IPNRGEVLKDGDIINIDVAIIKDGYFGDTSRMYCVGQPSTVARQLIDTTYEAMLAGIREVKPGATLGDVGHAIQKIAQRD GFSIVRDYCGHGIGKVYHEEPQVLHYGQPGQGVRLKPGMVFTIEPMINAGRAGTTVLRDGWTVVTKDRSLSAQWEHMVAV TDEGYELLTPWPDGTGRYEAP
Sequences:
>Translated_261_residues MAITYKTPDDIARLRISGRLAADVLAMIGEHIKAGVSTEELDALCNDYIVNTQKSIPANVGYLGFPKTICTSVNSVVCHG IPNRGEVLKDGDIINIDVAIIKDGYFGDTSRMYCVGQPSTVARQLIDTTYEAMLAGIREVKPGATLGDVGHAIQKIAQRD GFSIVRDYCGHGIGKVYHEEPQVLHYGQPGQGVRLKPGMVFTIEPMINAGRAGTTVLRDGWTVVTKDRSLSAQWEHMVAV TDEGYELLTPWPDGTGRYEAP >Mature_260_residues AITYKTPDDIARLRISGRLAADVLAMIGEHIKAGVSTEELDALCNDYIVNTQKSIPANVGYLGFPKTICTSVNSVVCHGI PNRGEVLKDGDIINIDVAIIKDGYFGDTSRMYCVGQPSTVARQLIDTTYEAMLAGIREVKPGATLGDVGHAIQKIAQRDG FSIVRDYCGHGIGKVYHEEPQVLHYGQPGQGVRLKPGMVFTIEPMINAGRAGTTVLRDGWTVVTKDRSLSAQWEHMVAVT DEGYELLTPWPDGTGRYEAP
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=247, Percent_Identity=44.9392712550607, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI40385867, Length=251, Percent_Identity=39.4422310756972, Blast_Score=194, Evalue=1e-49, Organism=Escherichia coli, GI1786364, Length=255, Percent_Identity=57.6470588235294, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI1788728, Length=257, Percent_Identity=24.9027237354086, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996291, Length=245, Percent_Identity=39.5918367346939, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6323273, Length=242, Percent_Identity=40.9090909090909, Blast_Score=201, Evalue=8e-53, Organism=Drosophila melanogaster, GI21355531, Length=249, Percent_Identity=39.3574297188755, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI24583427, Length=244, Percent_Identity=38.9344262295082, Blast_Score=186, Evalue=1e-47,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 28364; Mature: 28233
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITYKTPDDIARLRISGRLAADVLAMIGEHIKAGVSTEELDALCNDYIVNTQKSIPANV CEEECCCCHHHHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCC GYLGFPKTICTSVNSVVCHGIPNRGEVLKDGDIINIDVAIIKDGYFGDTSRMYCVGQPST CCCCCCHHHHHHHHHHEECCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCEEEECCCHH VARQLIDTTYEAMLAGIREVKPGATLGDVGHAIQKIAQRDGFSIVRDYCGHGIGKVYHEE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHCCCC PQVLHYGQPGQGVRLKPGMVFTIEPMINAGRAGTTVLRDGWTVVTKDRSLSAQWEHMVAV CCEEECCCCCCCEEECCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEE TDEGYELLTPWPDGTGRYEAP ECCCCEEEECCCCCCCCCCCC >Mature Secondary Structure AITYKTPDDIARLRISGRLAADVLAMIGEHIKAGVSTEELDALCNDYIVNTQKSIPANV EEECCCCHHHHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCC GYLGFPKTICTSVNSVVCHGIPNRGEVLKDGDIINIDVAIIKDGYFGDTSRMYCVGQPST CCCCCCHHHHHHHHHHEECCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCEEEECCCHH VARQLIDTTYEAMLAGIREVKPGATLGDVGHAIQKIAQRDGFSIVRDYCGHGIGKVYHEE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHCCCC PQVLHYGQPGQGVRLKPGMVFTIEPMINAGRAGTTVLRDGWTVVTKDRSLSAQWEHMVAV CCEEECCCCCCCEEECCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEE TDEGYELLTPWPDGTGRYEAP ECCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]