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The map label for this gene is qseB [H]

Identifier: 91782375

GI number: 91782375

Start: 1111926

End: 1112588

Strand: Reverse

Name: qseB [H]

Synonym: Bxe_A3456

Alternate gene names: 91782375

Gene position: 1112588-1111926 (Counterclockwise)

Preceding gene: 91782377

Following gene: 91782374

Centisome position: 22.73

GC content: 61.24

Gene sequence:

>663_bases
ATGCGTCTGCTTCTGGTGGAAGACGACGAAATGATCGCGGAGACGGTGCTCGAATCGATGGGGCGCGAAGGATATGCGAT
CGACTGGGCTCAGGACGGCCGGGCAGCCGAGTTGTCGCTCGGCAATGGCGTGTATGACCTTGTCCTGCTGGACCTCGGCC
TGCCCAGGAAAGACGGCATCGATCTGCTCGATAGCTACCGCAAACAGGGCGGCCTGGCCCCCGTCATCATTCTGACGGCA
CGCGATTCGGTGAACGACCGCATTCGCGGTCTCGACGCGGGCGCCGACGACTACCTGATCAAGCCCTTCGATCTCGATGA
ACTGGCAGCGAGAGCGCGCGCCTTGTTGCGGCGGCGAACCGGCCAGAAACAGCCCATCTATGCACATGGCGAGCTGACGC
TCGACCCCGCCGCCCATGAAGTGAGAAAAAACGGCATACCGATGGCTCTCGTACCACGGGAGTTCGCATTGCTGCAGGCG
CTGATCGAAGAGCCTGCACGCGTATTCACCAGAAGCGAACTCGAGGACAAGCTGTACGGATGGGGCGAAGAAGTGGGCAG
CAACACAATCGAAGTGCACGTGCACAGTCTGCGGCGCAAGATCGGCGCGGAACAGATCGTAACGGTGCGCGGCGTCGGCT
ATCGTCTGAAGAGGCGTGAATGA

Upstream 100 bases:

>100_bases
CCAGGACCGGATGATATTGACCGAACGCTTAACAATCGCTTAAGGAAACGTTAATTACAGATGCGCGACAATGGCGCCTG
GTGATAACGCAGGAGGCTCG

Downstream 100 bases:

>100_bases
GGTCGATCCGCAGCTGGCTGCTCGGCTGGCTCATCTGCGGCCTCGCGGCCGCCGCCGGTATTGCCGCATTCGCGATCTTT
CATACGGCTCGCGAAGAAGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLLLVEDDEMIAETVLESMGREGYAIDWAQDGRAAELSLGNGVYDLVLLDLGLPRKDGIDLLDSYRKQGGLAPVIILTA
RDSVNDRIRGLDAGADDYLIKPFDLDELAARARALLRRRTGQKQPIYAHGELTLDPAAHEVRKNGIPMALVPREFALLQA
LIEEPARVFTRSELEDKLYGWGEEVGSNTIEVHVHSLRRKIGAEQIVTVRGVGYRLKRRE

Sequences:

>Translated_220_residues
MRLLLVEDDEMIAETVLESMGREGYAIDWAQDGRAAELSLGNGVYDLVLLDLGLPRKDGIDLLDSYRKQGGLAPVIILTA
RDSVNDRIRGLDAGADDYLIKPFDLDELAARARALLRRRTGQKQPIYAHGELTLDPAAHEVRKNGIPMALVPREFALLQA
LIEEPARVFTRSELEDKLYGWGEEVGSNTIEVHVHSLRRKIGAEQIVTVRGVGYRLKRRE
>Mature_220_residues
MRLLLVEDDEMIAETVLESMGREGYAIDWAQDGRAAELSLGNGVYDLVLLDLGLPRKDGIDLLDSYRKQGGLAPVIILTA
RDSVNDRIRGLDAGADDYLIKPFDLDELAARARALLRRRTGQKQPIYAHGELTLDPAAHEVRKNGIPMALVPREFALLQA
LIEEPARVFTRSELEDKLYGWGEEVGSNTIEVHVHSLRRKIGAEQIVTVRGVGYRLKRRE

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=48.1481481481481, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=45.9090909090909, Blast_Score=187, Evalue=3e-49,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=37.2727272727273, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=37.1681415929204, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=34.5291479820628, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=35, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=34.2342342342342, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=35.7466063348416, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=33.9366515837104, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789809, Length=224, Percent_Identity=33.0357142857143, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=36.283185840708, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=31.0810810810811, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=31.140350877193, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788550, Length=159, Percent_Identity=30.8176100628931, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=39.8148148148148, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=26.5217391304348, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790299, Length=121, Percent_Identity=29.7520661157025, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI48994928, Length=121, Percent_Identity=37.1900826446281, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24610; Mature: 24610

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVEDDEMIAETVLESMGREGYAIDWAQDGRAAELSLGNGVYDLVLLDLGLPRKDGI
CEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCHHEEHEECCCCCCCCCH
DLLDSYRKQGGLAPVIILTARDSVNDRIRGLDAGADDYLIKPFDLDELAARARALLRRRT
HHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GQKQPIYAHGELTLDPAAHEVRKNGIPMALVPREFALLQALIEEPARVFTRSELEDKLYG
CCCCCEEECCCEEECHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WGEEVGSNTIEVHVHSLRRKIGAEQIVTVRGVGYRLKRRE
CHHHHCCCEEEEHHHHHHHHHCHHHEEEEECCCEEECCCC
>Mature Secondary Structure
MRLLLVEDDEMIAETVLESMGREGYAIDWAQDGRAAELSLGNGVYDLVLLDLGLPRKDGI
CEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCHHEEHEECCCCCCCCCH
DLLDSYRKQGGLAPVIILTARDSVNDRIRGLDAGADDYLIKPFDLDELAARARALLRRRT
HHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GQKQPIYAHGELTLDPAAHEVRKNGIPMALVPREFALLQALIEEPARVFTRSELEDKLYG
CCCCCEEECCCEEECHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WGEEVGSNTIEVHVHSLRRKIGAEQIVTVRGVGYRLKRRE
CHHHHCCCEEEEHHHHHHHHHCHHHEEEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]