Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is xylA [H]

Identifier: 91782275

GI number: 91782275

Start: 1002324

End: 1003373

Strand: Direct

Name: xylA [H]

Synonym: Bxe_A3559

Alternate gene names: 91782275

Gene position: 1002324-1003373 (Clockwise)

Preceding gene: 91782274

Following gene: 91782276

Centisome position: 20.47

GC content: 59.33

Gene sequence:

>1050_bases
ATGCGAGACTTCCTGAAATCCGCTTTTGGCAGATCGAAGCCAAAGCAGCTCCGAATCCTGCCCCAGGACGTGACGATCGA
GATCGGGCAAGGGCAGACGCTGCTTGAAGCTGCGCTTGCCAACGGTATTGCCTATCCGCACGATTGCACCGTTGGCACCT
GTGCGTCCTGCAAGACCCGTCTGAAGCAGGGGCGGGTACGCGAAGCAACTCCTTTTGGCTACACGCTCTCAAAGGACGAA
CTCGACGCAGGATACATCCTTGCCTGCCAGGCGTTTCCAAAGGACGAACTGACGGTTGTCGAGATTGATTCCTCGGCCGG
GGATCTGATGCCTGCCGAGAAATACACCGCCAATATCATCGCGACTGAGCCCCTCACGCACGACATCCTGAGAGTGACAG
TGCAGACGGATCGGGCAGTCAGCTATGCCGCCGGGCAGTACGCAAATTTACGCAAGGCTGGCGGCGGTCGTGCGCGGTCG
TATTCCTTCGCGAATGCACCTCAGCGCAAGGGCAGGACACTCCTCGAGTTCTATATTCGCAAGGTGCCGGGTGGCGAATT
CACCGAATCGCTCTTTGGAGGGGAACTCAAGGGGGTGTCGCTCGAGATGGAAGCACCGCTGGGCACTTTTCATCTGCGTG
CCGGCGATTCCCACATGGTATGCATCGCTGGCGGCAGTGGTCTCGCGCCGCTGGTCAGCATACTCGAGCATGCGCGAGGC
AATCGTATCAAACGCGATTGCACGCTCCTGTTTGGCGCGAGGACCCAGGCTGATCTCTACCAGCTTGATGCAATCGGGAG
CATCGCCAGCAACTGGCAAGGGGACTTCCGTTTTATTCCGGTCCTCTCAGACGAGCCGCTGGACAGTGACTGGAAGGGGG
CAAGAGGGCTGGTCACCGATCATATCGCGCCCGGATTCTGCGAGGGGGGCGAGGGGTACCTGTGTGGTCCGCCTCTCATG
ATCGACGCCGCCATCGCAAGCCTCGCGAAGCACGGCATCCCTCTCGAGAAGGTGTTTTACGACAAGTTCACCGATAGCCG
TGACCGCTAA

Upstream 100 bases:

>100_bases
TGGTATTCGCCGTCATTTCCATCGTCGTGGTTGTCGTATTAGCTGGACAGTCATTTCGACGTCTGGCATGGCCAGCGACA
CAGAATATTAGTGGTGTTTG

Downstream 100 bases:

>100_bases
CTAACCGATCTCGACAACAAGAGCGAAGATCCGGAGGAGACAAGAGATGAAGACGAAATATGTTGCTGTGGCGACAGGGT
GCCTCGTTGTTATGCTCTGG

Product: p-cymene monooxygenase, reductase subunit(CymAb)

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTRLKQGRVREATPFGYTLSKDE
LDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANIIATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARS
YSFANAPQRKGRTLLEFYIRKVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG
NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTDHIAPGFCEGGEGYLCGPPLM
IDAAIASLAKHGIPLEKVFYDKFTDSRDR

Sequences:

>Translated_349_residues
MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTRLKQGRVREATPFGYTLSKDE
LDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANIIATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARS
YSFANAPQRKGRTLLEFYIRKVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG
NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTDHIAPGFCEGGEGYLCGPPLM
IDAAIASLAKHGIPLEKVFYDKFTDSRDR
>Mature_349_residues
MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTRLKQGRVREATPFGYTLSKDE
LDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANIIATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARS
YSFANAPQRKGRTLLEFYIRKVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG
NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTDHIAPGFCEGGEGYLCGPPLM
IDAAIASLAKHGIPLEKVFYDKFTDSRDR

Specific function: Oxidizes toluene and xylenes to (methyl)benzyl alcohols. The enzyme has a broad specificity and also oxidizes (methyl)benzyl alcohols to (methyl)benzaldehydes and indole to indoxyl [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787658, Length=73, Percent_Identity=42.4657534246575, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 37851; Mature: 37851

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTR
CHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LKQGRVREATPFGYTLSKDELDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANII
HHCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHEEEEE
ATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARSYSFANAPQRKGRTLLEFYIR
EECCCCCEEEEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHH
KVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG
HCCCCHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCC
NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTD
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH
HIAPGFCEGGEGYLCGPPLMIDAAIASLAKHGIPLEKVFYDKFTDSRDR
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTR
CHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LKQGRVREATPFGYTLSKDELDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANII
HHCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHEEEEE
ATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARSYSFANAPQRKGRTLLEFYIR
EECCCCCEEEEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHH
KVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG
HCCCCHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCC
NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTD
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH
HIAPGFCEGGEGYLCGPPLMIDAAIASLAKHGIPLEKVFYDKFTDSRDR
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1999388 [H]