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The map label for this gene is slyA [H]

Identifier: 91782254

GI number: 91782254

Start: 977451

End: 977933

Strand: Reverse

Name: slyA [H]

Synonym: Bxe_A3581

Alternate gene names: 91782254

Gene position: 977933-977451 (Counterclockwise)

Preceding gene: 91782255

Following gene: 91782253

Centisome position: 19.97

GC content: 59.01

Gene sequence:

>483_bases
ATGCAGCACATGTCAAAGCTCGACATGTTGCGCCTCTCGGTCAGTAGCACGCTCGTCGGAGCGTCACGAAGATGGCGCCG
CACCAGCCATGAGGTACTGGCCGCATTCAACGTCTCCGAGGCATGCGCTACTCCGCTGCTGATAGCCGGACGACTTGGCA
AAGACATTCGCCAGGGAGTGCTGGCTGAACACGTCGGTATCGAAGGGCCATCGCTTGTGCGTTTGCTCGATCAGCTGTGC
GAGGCAGGGCTGATGCAGCGCCACGAAGATCCGGACGATCGCCGCGCCAAAACCGTCACGCTGACTGATGAGGGGCGAGC
CATTACTGCCCAGATGGAGGAGGAACTGGTGAACCTGCGAGCACGGGTTCTGAAAGGGGTAACCCGGACCGAACTTGAAA
CCACGCTACGCGTATTGAAGATATTCCAGAGCGCGGAGCTCTTGCCGGAATCGACCGAAAGTCAAAACCATCAAGCGCCG
TAG

Upstream 100 bases:

>100_bases
GCGTGGGCGGCGGCTGAGACAGCACCGCATGAACTACATCGGTACTGGCAGTTTGCACTTTATATTGATAGTTGGCTAAC
GAATGTTTAAAGGAAAAACC

Downstream 100 bases:

>100_bases
GCACCGGCTTCCGCGTCTGTTGAGTCAAGAATCGCTTTTCCCTTTTCAGGGTCACCGTATTCACCTTTCCGTCAAGAAAC
CTGCAATGAACTCTCAATCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MQHMSKLDMLRLSVSSTLVGASRRWRRTSHEVLAAFNVSEACATPLLIAGRLGKDIRQGVLAEHVGIEGPSLVRLLDQLC
EAGLMQRHEDPDDRRAKTVTLTDEGRAITAQMEEELVNLRARVLKGVTRTELETTLRVLKIFQSAELLPESTESQNHQAP

Sequences:

>Translated_160_residues
MQHMSKLDMLRLSVSSTLVGASRRWRRTSHEVLAAFNVSEACATPLLIAGRLGKDIRQGVLAEHVGIEGPSLVRLLDQLC
EAGLMQRHEDPDDRRAKTVTLTDEGRAITAQMEEELVNLRARVLKGVTRTELETTLRVLKIFQSAELLPESTESQNHQAP
>Mature_160_residues
MQHMSKLDMLRLSVSSTLVGASRRWRRTSHEVLAAFNVSEACATPLLIAGRLGKDIRQGVLAEHVGIEGPSLVRLLDQLC
EAGLMQRHEDPDDRRAKTVTLTDEGRAITAQMEEELVNLRARVLKGVTRTELETTLRVLKIFQSAELLPESTESQNHQAP

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=120, Percent_Identity=36.6666666666667, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17820; Mature: 17820

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHMSKLDMLRLSVSSTLVGASRRWRRTSHEVLAAFNVSEACATPLLIAGRLGKDIRQGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAEHVGIEGPSLVRLLDQLCEAGLMQRHEDPDDRRAKTVTLTDEGRAITAQMEEELVNLR
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
ARVLKGVTRTELETTLRVLKIFQSAELLPESTESQNHQAP
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQHMSKLDMLRLSVSSTLVGASRRWRRTSHEVLAAFNVSEACATPLLIAGRLGKDIRQGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAEHVGIEGPSLVRLLDQLCEAGLMQRHEDPDDRRAKTVTLTDEGRAITAQMEEELVNLR
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
ARVLKGVTRTELETTLRVLKIFQSAELLPESTESQNHQAP
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA