| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mdtP [H]
Identifier: 91782253
GI number: 91782253
Start: 975857
End: 977365
Strand: Reverse
Name: mdtP [H]
Synonym: Bxe_A3582
Alternate gene names: 91782253
Gene position: 977365-975857 (Counterclockwise)
Preceding gene: 91782254
Following gene: 91782252
Centisome position: 19.96
GC content: 66.4
Gene sequence:
>1509_bases ATGAACTCTCAATCCCTGTCCGCGTTCGCGCTCTCGAGCCGGGCCGCCGTCGCCGCCGCGATGACGGCGCTCACCCTCAC GGGGTGCGCGAACTACTTCGGCATGAAGAGCGACAAGCAGATCTCGTCGCCGATGCAGTATGAGTCCTCGCAGAGTTTGC CCGGCGAAGACGGCCAATGGCCGTCGCTCGACTGGGCCAACCAGTTCGGCGACCAGCAACTGCCCAGGCTGATCGCCGAA GCGCTTGACGGCAGCCCGTCGATTGCGCAGGCGCAGGCGCGGCTCGCGAAGGCGTCCTCGTATATCGAGACCTCGCGCGC GGCGCTGTTCCCGAAGGTCAACGGCAGCTATTCGTGGACTCGCGAACTGTACTCCGCCAATGCGATCTATCCGCCTCCGT TTGGGGGCACCTGGTTTAGCGAGAACAACGTGCTCGCAAGCGCGTCGTGGGATCTCGACCTGTGGGGCAAGAACCGCCAG CGCCTCGGCCAGGCCGTATCGCAGGAAAGGGCCGCTCAGGCCGACATGCAGCAGGCGCGCGTGACGCTTGCCGCGTCCGT GGCCAGCACCTACAACCAGCTCGCGCAGTTGTACGCGTTCCGTGAAATCGCCAGGCGCGAAATCGCCAACCGCCAGGACA TCGGCCGCATCACCGACGGCCGCGTGACCGCCGGCCTCGACACCAACGTCGAGCGGCAAACTGCGGCCGGCAACATCGCG ACCAGCCAGTCGAACCTGACCGACCTCGACGGCCAGATCACCGTCGTGCGCTACCAGTTGGGTGCGCTGCTCGGCAAGGG TCCGGATCGTGGCCTGCAGATCGCCATGCCGGTGCTGACCACCGGCGACACGGTCGCGCTGCCGAACAATATTCCGGCCG ATCTGGTAGCGCGCCGCGCGGATATCGTCGCCGCGCGCTGGCAGGTCGAAGCCGCGATGCACGACGTGAAGGAAGCGAAA GCCGAGTTCTTCCCGGACGTCAATCTCGCGGCCGGCTTCGGTTTCGACGCGTTCGGCTGGGGGCGCTTTCTCACCTCCGC AAGCCGTCAGGTCCAGCTCGGCCCGGCCATTCACCTGCCGATCTTCGACGCCGGCGCGCTGCGCTCGCAATTGAAGGGCC GCTATGCCGACTTCGACCTGGACGTGGCGAACTACAACCAGACGCTGATCAACGCGCTGCAGGACGTCGCGACACAAGTG TCGTCGATCCGTTCGATCGACCAGCAATCAGGCGATGCACAACGCGCGCTCGACGCAACGAGCAAGGCGTATCAGCTCGC CGTGGTCCGCTACAAGGCTGGCCTGTCGCCGCAGCTGCAGGTGCTGACCGCCGACCAGAACCTGCTTGCCGCCGAACAGA CGGTGACGAGCCTGAAGATGCGCCGCCGCGATATGCAGATCGGACTCATCAAGGCGCTTGGCGGCGGTTTTGACGCGACG CAGACCGGCCTCGTGGTGCCGGCCGATGCCCCGGCCTCGGCCACCGCCGCGACCGCCACGGCGAACTGA
Upstream 100 bases:
>100_bases CATCAAGCGCCGTAGGCACCGGCTTCCGCGTCTGTTGAGTCAAGAATCGCTTTTCCCTTTTCAGGGTCACCGTATTCACC TTTCCGTCAAGAAACCTGCA
Downstream 100 bases:
>100_bases AGCCACGCCGCCGCAAACCACATTCGCACGAACATCCGAATAAACGACGACGCTTGAGAGAACCCGGAGCACATCAATGA GCACCACCCAAAAGCCCGCG
Product: major facilitator superfamily efflux pump outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MNSQSLSAFALSSRAAVAAAMTALTLTGCANYFGMKSDKQISSPMQYESSQSLPGEDGQWPSLDWANQFGDQQLPRLIAE ALDGSPSIAQAQARLAKASSYIETSRAALFPKVNGSYSWTRELYSANAIYPPPFGGTWFSENNVLASASWDLDLWGKNRQ RLGQAVSQERAAQADMQQARVTLAASVASTYNQLAQLYAFREIARREIANRQDIGRITDGRVTAGLDTNVERQTAAGNIA TSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAMPVLTTGDTVALPNNIPADLVARRADIVAARWQVEAAMHDVKEAK AEFFPDVNLAAGFGFDAFGWGRFLTSASRQVQLGPAIHLPIFDAGALRSQLKGRYADFDLDVANYNQTLINALQDVATQV SSIRSIDQQSGDAQRALDATSKAYQLAVVRYKAGLSPQLQVLTADQNLLAAEQTVTSLKMRRRDMQIGLIKALGGGFDAT QTGLVVPADAPASATAATATAN
Sequences:
>Translated_502_residues MNSQSLSAFALSSRAAVAAAMTALTLTGCANYFGMKSDKQISSPMQYESSQSLPGEDGQWPSLDWANQFGDQQLPRLIAE ALDGSPSIAQAQARLAKASSYIETSRAALFPKVNGSYSWTRELYSANAIYPPPFGGTWFSENNVLASASWDLDLWGKNRQ RLGQAVSQERAAQADMQQARVTLAASVASTYNQLAQLYAFREIARREIANRQDIGRITDGRVTAGLDTNVERQTAAGNIA TSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAMPVLTTGDTVALPNNIPADLVARRADIVAARWQVEAAMHDVKEAK AEFFPDVNLAAGFGFDAFGWGRFLTSASRQVQLGPAIHLPIFDAGALRSQLKGRYADFDLDVANYNQTLINALQDVATQV SSIRSIDQQSGDAQRALDATSKAYQLAVVRYKAGLSPQLQVLTADQNLLAAEQTVTSLKMRRRDMQIGLIKALGGGFDAT QTGLVVPADAPASATAATATAN >Mature_502_residues MNSQSLSAFALSSRAAVAAAMTALTLTGCANYFGMKSDKQISSPMQYESSQSLPGEDGQWPSLDWANQFGDQQLPRLIAE ALDGSPSIAQAQARLAKASSYIETSRAALFPKVNGSYSWTRELYSANAIYPPPFGGTWFSENNVLASASWDLDLWGKNRQ RLGQAVSQERAAQADMQQARVTLAASVASTYNQLAQLYAFREIARREIANRQDIGRITDGRVTAGLDTNVERQTAAGNIA TSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAMPVLTTGDTVALPNNIPADLVARRADIVAARWQVEAAMHDVKEAK AEFFPDVNLAAGFGFDAFGWGRFLTSASRQVQLGPAIHLPIFDAGALRSQLKGRYADFDLDVANYNQTLINALQDVATQV SSIRSIDQQSGDAQRALDATSKAYQLAVVRYKAGLSPQLQVLTADQNLLAAEQTVTSLKMRRRDMQIGLIKALGGGFDAT QTGLVVPADAPASATAATATAN
Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=480, Percent_Identity=30, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI1786785, Length=467, Percent_Identity=26.9807280513919, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 53817; Mature: 53817
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSQSLSAFALSSRAAVAAAMTALTLTGCANYFGMKSDKQISSPMQYESSQSLPGEDGQW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCC PSLDWANQFGDQQLPRLIAEALDGSPSIAQAQARLAKASSYIETSRAALFPKVNGSYSWT CCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RELYSANAIYPPPFGGTWFSENNVLASASWDLDLWGKNRQRLGQAVSQERAAQADMQQAR HHHHCCCCCCCCCCCCCEECCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH VTLAASVASTYNQLAQLYAFREIARREIANRQDIGRITDGRVTAGLDTNVERQTAAGNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCHHHCCCCCC TSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAMPVLTTGDTVALPNNIPADLVARRA CCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCEEEEEEEECCCEEECCCCCCHHHHHHHH DIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLTSASRQVQLGPAIHLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCEEEECCEEEEC IFDAGALRSQLKGRYADFDLDVANYNQTLINALQDVATQVSSIRSIDQQSGDAQRALDAT CCCHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SKAYQLAVVRYKAGLSPQLQVLTADQNLLAAEQTVTSLKMRRRDMQIGLIKALGGGFDAT HHHHEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTGLVVPADAPASATAATATAN CCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNSQSLSAFALSSRAAVAAAMTALTLTGCANYFGMKSDKQISSPMQYESSQSLPGEDGQW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCC PSLDWANQFGDQQLPRLIAEALDGSPSIAQAQARLAKASSYIETSRAALFPKVNGSYSWT CCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RELYSANAIYPPPFGGTWFSENNVLASASWDLDLWGKNRQRLGQAVSQERAAQADMQQAR HHHHCCCCCCCCCCCCCEECCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH VTLAASVASTYNQLAQLYAFREIARREIANRQDIGRITDGRVTAGLDTNVERQTAAGNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCHHHCCCCCC TSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAMPVLTTGDTVALPNNIPADLVARRA CCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCEEEEEEEECCCEEECCCCCCHHHHHHHH DIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLTSASRQVQLGPAIHLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCEEEECCEEEEC IFDAGALRSQLKGRYADFDLDVANYNQTLINALQDVATQVSSIRSIDQQSGDAQRALDAT CCCHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SKAYQLAVVRYKAGLSPQLQVLTADQNLLAAEQTVTSLKMRRRDMQIGLIKALGGGFDAT HHHHEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTGLVVPADAPASATAATATAN CCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]