| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782219
Identifier: 91782219
GI number: 91782219
Start: 938553
End: 939626
Strand: Direct
Name: 91782219
Synonym: Bxe_A3616
Alternate gene names: NA
Gene position: 938553-939626 (Clockwise)
Preceding gene: 91782218
Following gene: 91782220
Centisome position: 19.17
GC content: 60.06
Gene sequence:
>1074_bases ATGTCGGACATTACACATACTGGCGAGCATCAGGCGTTGGTGGTCGGCGCGACGGGCATTATCGGTAGCGCGATCCTGCA TCGCCTTGGCGCAGCGGAGGGCTGGACGGCAATCGGCCTGTCGCGCTCACGTCGGGTTGCCGAAGGCCGCGCGCGCATGC TGGAAGTCGATCTGCTCGATCCGCAAGACTGCGCGCGCAAGCTGGGTGCATTGAATCGCATCACGCATATCTTCTACGCC GCGTATCAGGCGCGGCCTTCGCGTGCCGAGGAGGTTGCCCCGAACGTGCAGATGCTGCGCAATGTGGTCGACGCAGTATC CGGGCGTGCCAGAGGTTTGAAGAAAATCGTACTGATCACCGGCGCCAAATTTTACGGCATTCAGTGGGGACGCGTGAAAA CGCCGATGAAGGAAACCGACGCCCGTCAATTGCCGCCGAACTTCTACTACGACCAGGAAGACTTTTTGCGCGATGCACAG AGGCAGGCGGACTGGCACTGGTGCAATCTCATTCCACCATTCGTTTCGGGCTACTCGGTGGGCAACCCCATGAATCTCGT CATGGCAATTGGCGTGTTCGCCTCGCTTTCAAGAGAGCTGAATCTGCCGTTGCGCTTTCCCGGCTTGCCCGGCGCATGGA GCGCGTTGCAGCAGATCGCCGATGCCGAACAGATTGCCGCTGCCGCGCATTGGGCGGCAACGTCGCCCGCCGCCAACAAC GAAGCATTCAATGTTACCAACGGAGATCCCATTCGCTGGGAGAACTTCTGGCCCGCCGTCGCCGGGCATTTCGGCATGCG TCTCGAAGCACCGAAGACGCTGCCGCTCGGGCGTCTGATGGCAGACAACGAAGCAGCATGGGCGCGCATGGTCGAACGCT ATCGATTGCAGGCCGCATCGATAGCGAAACTCGTCGACTGGAACTGGGCGGACTATATGTTCCGGATGGAATACGACGTT CTGATGGAGACCGGCAAGATTCGCCGTGCAGGCTTTCAGGATTGCGTCGACACGACGGAGCGCTTCCTCGCGCGCTTCCG GCAATTGCAGCAACAACAGATCATTCCTCGTTGA
Upstream 100 bases:
>100_bases CTTTCGCCGAGTCGGCTGCCGGTTGCATGTTCATTCATCGCGACCCGCTACTCAAGCCGATAGGGATTTATCTGGTCGAA GAGGTCAGCGTTCGCTAGCG
Downstream 100 bases:
>100_bases AACCTTACCGGTGCGGCGAACGAAGTCGTCGCGGCTGAAGATCGGAATAATTCATGAACACGAGTAACGGCAATTCACGC GACACGCAAACTGATTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase/Nucleoside-Diphosphate-Sugar Epimerase; Aldo-Keto Reductase Family Protein; Oxidoreductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short-Chain Dehydrogenase/Reductase Sdr; Short Chain Dehydrogenase Family Protein; NAD Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSDITHTGEHQALVVGATGIIGSAILHRLGAAEGWTAIGLSRSRRVAEGRARMLEVDLLDPQDCARKLGALNRITHIFYA AYQARPSRAEEVAPNVQMLRNVVDAVSGRARGLKKIVLITGAKFYGIQWGRVKTPMKETDARQLPPNFYYDQEDFLRDAQ RQADWHWCNLIPPFVSGYSVGNPMNLVMAIGVFASLSRELNLPLRFPGLPGAWSALQQIADAEQIAAAAHWAATSPAANN EAFNVTNGDPIRWENFWPAVAGHFGMRLEAPKTLPLGRLMADNEAAWARMVERYRLQAASIAKLVDWNWADYMFRMEYDV LMETGKIRRAGFQDCVDTTERFLARFRQLQQQQIIPR
Sequences:
>Translated_357_residues MSDITHTGEHQALVVGATGIIGSAILHRLGAAEGWTAIGLSRSRRVAEGRARMLEVDLLDPQDCARKLGALNRITHIFYA AYQARPSRAEEVAPNVQMLRNVVDAVSGRARGLKKIVLITGAKFYGIQWGRVKTPMKETDARQLPPNFYYDQEDFLRDAQ RQADWHWCNLIPPFVSGYSVGNPMNLVMAIGVFASLSRELNLPLRFPGLPGAWSALQQIADAEQIAAAAHWAATSPAANN EAFNVTNGDPIRWENFWPAVAGHFGMRLEAPKTLPLGRLMADNEAAWARMVERYRLQAASIAKLVDWNWADYMFRMEYDV LMETGKIRRAGFQDCVDTTERFLARFRQLQQQQIIPR >Mature_356_residues SDITHTGEHQALVVGATGIIGSAILHRLGAAEGWTAIGLSRSRRVAEGRARMLEVDLLDPQDCARKLGALNRITHIFYAA YQARPSRAEEVAPNVQMLRNVVDAVSGRARGLKKIVLITGAKFYGIQWGRVKTPMKETDARQLPPNFYYDQEDFLRDAQR QADWHWCNLIPPFVSGYSVGNPMNLVMAIGVFASLSRELNLPLRFPGLPGAWSALQQIADAEQIAAAAHWAATSPAANNE AFNVTNGDPIRWENFWPAVAGHFGMRLEAPKTLPLGRLMADNEAAWARMVERYRLQAASIAKLVDWNWADYMFRMEYDVL METGKIRRAGFQDCVDTTERFLARFRQLQQQQIIPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40077; Mature: 39946
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITHTGEHQALVVGATGIIGSAILHRLGAAEGWTAIGLSRSRRVAEGRARMLEVDLLD CCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHEEEEECCC PQDCARKLGALNRITHIFYAAYQARPSRAEEVAPNVQMLRNVVDAVSGRARGLKKIVLIT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCHHHCCEEEEEEE GAKFYGIQWGRVKTPMKETDARQLPPNFYYDQEDFLRDAQRQADWHWCNLIPPFVSGYSV CCHHCCEECCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHCCCCC GNPMNLVMAIGVFASLSRELNLPLRFPGLPGAWSALQQIADAEQIAAAAHWAATSPAANN CCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EAFNVTNGDPIRWENFWPAVAGHFGMRLEAPKTLPLGRLMADNEAAWARMVERYRLQAAS CEEECCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH IAKLVDWNWADYMFRMEYDVLMETGKIRRAGFQDCVDTTERFLARFRQLQQQQIIPR HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDITHTGEHQALVVGATGIIGSAILHRLGAAEGWTAIGLSRSRRVAEGRARMLEVDLLD CCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHEEEEECCC PQDCARKLGALNRITHIFYAAYQARPSRAEEVAPNVQMLRNVVDAVSGRARGLKKIVLIT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCHHHCCEEEEEEE GAKFYGIQWGRVKTPMKETDARQLPPNFYYDQEDFLRDAQRQADWHWCNLIPPFVSGYSV CCHHCCEECCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHCCCCC GNPMNLVMAIGVFASLSRELNLPLRFPGLPGAWSALQQIADAEQIAAAAHWAATSPAANN CCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EAFNVTNGDPIRWENFWPAVAGHFGMRLEAPKTLPLGRLMADNEAAWARMVERYRLQAAS CEEECCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH IAKLVDWNWADYMFRMEYDVLMETGKIRRAGFQDCVDTTERFLARFRQLQQQQIIPR HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA