| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782216
Identifier: 91782216
GI number: 91782216
Start: 936277
End: 936840
Strand: Direct
Name: 91782216
Synonym: Bxe_A3619
Alternate gene names: NA
Gene position: 936277-936840 (Clockwise)
Preceding gene: 91782215
Following gene: 91782217
Centisome position: 19.12
GC content: 57.62
Gene sequence:
>564_bases ATGCACCGCAAACTGACCAGCGCCATGGAGCACGCGAAAGATTCGCGCCAGACGAACACGGTGCCACAAGATGGCGGGGC TTTGGACTCTCTTGGTCGATGGCGGGAGTGGGTCGTGCCGTCGCCTGACTCACAGGCGACGTATCTCGCGTGGCTGCAGA TACGCGAGCAACTCGAGGCAATCGGCGCGCGAGAAGCAGCACAACATGTCACAGCGCGCGACATTGCACAATTGAGGGCA CTGTTTCGTCCATACAGCCGCAAGGGCTTTATCGCCCAACACGAGCTTGCGGACTACGCCGAGATCGATCTCCGCTTTCA CCAGCAGATTGTCCGTTTATCGGGCAATCGGGCGCTACAGCGGCTCTGGGCACTGTTTGGTCATGAGCAGATGCAGATGG TAAAGGCCAACACGATCGAATCTCTTGACCGTGCGCAGGTTTCGTTGCAAGACCATCTGGCCATCATTGACGCTCTGGAA AGCGCGGAGCCGGAGAGATGTGCATTGCTTTGCAAGCAGCATATCCGCGCGCTGTATGACCATATCTGCCACGAGCTCCA ATAA
Upstream 100 bases:
>100_bases GTGTACAGTAGTTTCTTAAGCGATAGGACGGCTTGACGGCGGGCACCAGAGCGTCCGATGGTGAAGCTGATGAGAGAGAG GCCGAAAGGGGAACATACTC
Downstream 100 bases:
>100_bases CAACAGCTTACTCTAAGATGAAGTTCACCACTTTCGCCTGCGATGGTCAACCGTGCCTCGGCGTGGCAACAGAAAACGAT ACTGTATTGAGTCTGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator GntR Family
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MHRKLTSAMEHAKDSRQTNTVPQDGGALDSLGRWREWVVPSPDSQATYLAWLQIREQLEAIGAREAAQHVTARDIAQLRA LFRPYSRKGFIAQHELADYAEIDLRFHQQIVRLSGNRALQRLWALFGHEQMQMVKANTIESLDRAQVSLQDHLAIIDALE SAEPERCALLCKQHIRALYDHICHELQ
Sequences:
>Translated_187_residues MHRKLTSAMEHAKDSRQTNTVPQDGGALDSLGRWREWVVPSPDSQATYLAWLQIREQLEAIGAREAAQHVTARDIAQLRA LFRPYSRKGFIAQHELADYAEIDLRFHQQIVRLSGNRALQRLWALFGHEQMQMVKANTIESLDRAQVSLQDHLAIIDALE SAEPERCALLCKQHIRALYDHICHELQ >Mature_187_residues MHRKLTSAMEHAKDSRQTNTVPQDGGALDSLGRWREWVVPSPDSQATYLAWLQIREQLEAIGAREAAQHVTARDIAQLRA LFRPYSRKGFIAQHELADYAEIDLRFHQQIVRLSGNRALQRLWALFGHEQMQMVKANTIESLDRAQVSLQDHLAIIDALE SAEPERCALLCKQHIRALYDHICHELQ
Specific function: Unknown
COG id: COG1802
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21468; Mature: 21468
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKLTSAMEHAKDSRQTNTVPQDGGALDSLGRWREWVVPSPDSQATYLAWLQIREQLEA CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH IGAREAAQHVTARDIAQLRALFRPYSRKGFIAQHELADYAEIDLRFHQQIVRLSGNRALQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RLWALFGHEQMQMVKANTIESLDRAQVSLQDHLAIIDALESAEPERCALLCKQHIRALYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HICHELQ HHHHHCC >Mature Secondary Structure MHRKLTSAMEHAKDSRQTNTVPQDGGALDSLGRWREWVVPSPDSQATYLAWLQIREQLEA CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH IGAREAAQHVTARDIAQLRALFRPYSRKGFIAQHELADYAEIDLRFHQQIVRLSGNRALQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RLWALFGHEQMQMVKANTIESLDRAQVSLQDHLAIIDALESAEPERCALLCKQHIRALYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HICHELQ HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA