| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782057
Identifier: 91782057
GI number: 91782057
Start: 763948
End: 765660
Strand: Reverse
Name: 91782057
Synonym: Bxe_A3787
Alternate gene names: NA
Gene position: 765660-763948 (Counterclockwise)
Preceding gene: 91782058
Following gene: 91782056
Centisome position: 15.64
GC content: 58.79
Gene sequence:
>1713_bases ATGAGTCGAGGAGAAAGAATTGGTAACTTTGCAGTGTTCGCACTGGGCGTCTTTACGCTCACGACAACGACACTCGGGGT TTGGCAGCACTTTTCGCCCCTACCATTCGGCGATTCGTGGGACGGGGCCATCGGCTTCTATATGCGTGCCATACAAAACC CATGGCATGCGTTCTTCGAACAACACAATGAGCACCGCCTCGCATTCTCACGGCTAATCTTTTTCGCCGACGTTCGTTTT TTTGGTGGACGAAACGTCTTCTCGCTCGTGGCGAATCTCGCACTGGCGGCCCTGCTCGCGATGACCTTCTTTCGCATTGC AGTCCACCACTGCGCCACGCTTGGGCGCGAAGCGCGCCTCGGACTCGCAGGCGCCGTCCTCGTGTTCGTCTTTTCGTGGG CTCAGAAAGAGAACTTCACGTGGGGCTTCCAAAGCCAGTGGTTCGCTGTCTATCTCTTTGCTCTACTTGCGTTCCATGCA CTCGACCGTACGGCCGAAGCGCTCGCCCAAAGCGAGCGAGCGAAGTCGCACGGATGGCTAGCGGTGGCACTCATAAGCGC GACAGTCGCGGCGTATTCGATGTCGAGCGGCGTTCTCGTGTTTCCAGTCCTGATCGTTCAAGCGATTTATCGGCGATTGA GGCGGCGCGACCTCACCGTCATTTGCGCCGTAACAGTCGCAGTCTGGGTCGTGTATTTCGTCGACTGGCAAAAGTCGGCG AGCAGCGGCGATTTGATGACCAGCTTGCCTCAGCATCCGTTTGCTGCGCTTCAATACATGCTGCTCTATCTTGGCGCACC CGCGTTCAACGTACGGCTTGGTGTCCCAGCTTCGTACGTGACGGGAGCGCTCGCGTTGACTGCGCTAGCGGTATACAGCA TCAATGCTGTCAAGTCCGGAGAAAGTCGTCCGCGTGGCGTATCCCTGCTTGCATTTGCCTTGTTCGTCACGGGCAACGCG TTACTGACGGCGAGCGGACGCCTGTGGTTCGGTCTCGGAACCGCCCTTGCCTCGCGCTACACGACAGCTTCGCTGATGGG TTGGCTCGCGATTGGCATCTTTGCCGTGTTGAACGTCGAGGCTGGCAAACAATGCAGGCGCGTGCTGTTCGTAACTGTAC TGGCAACGCTGCTGGTTGCCTCAGGGCAGCGCCTGAGTTTCAGGGCTGATCGCGACGTCAGCTACGCTCGTCTCGTCGCG GGCTTGGCGCTGAGAGCCCATGTATATGATCCAGACATCACCAAGGCAGTCTATCCGTTTCCCGAGATTTTGGTTAACGA CGCAAAGCTGGCAGAGGCCGCCCAGCTCTCGATTTTCGCACCCAATCAGCCGGACTATCTGGTAGCACCGGTTACCGTTG ACCCCACCGTTTTGTGCGACGGATCTCTCGACAGAATATCGGCCACCACAACTCCCGGCGTCTATCGTGCAACGGGGTGG ATCTACGAGACAGCTCGTGGCCACACACCTCGGGCCGTCGTTCTGACCGACGCCACCACCCACGCAACGTTAGGCACAGG CGTGACTGGCGGCGAGCGCAACGATCTTCGCGGGACATACAGCGGGAACGCCTTGCACAGCGGTTGGACCGCATTCTTTA CGGCCCCGGCAAGCGGCGGGATACGAGTAAATGGGCAGACGGCTGGAGATGAGTATTGCGCCTTGGCTGCGGATAGGCCG ATGTCCGCGACACTGCAAATTCCGGCCAGGTAG
Upstream 100 bases:
>100_bases GTCCTGTACACCCGCTGGTTCTGGGCAATCATCATGCTGATCATCCGCTGCGTGCCGCGATTCCTGTTCAAGCGCGCGTC GCTGTGAGGCGGCGGTAACT
Downstream 100 bases:
>100_bases GCGGCCACGTAGTTTCGCCACGTCGTCAAACCAGGCATTTTTCTAGACGTTTCGGGCTTGCTTGTATGATCTAGCCCTCA CAAAGTTGCAGAACACCCCT
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MSRGERIGNFAVFALGVFTLTTTTLGVWQHFSPLPFGDSWDGAIGFYMRAIQNPWHAFFEQHNEHRLAFSRLIFFADVRF FGGRNVFSLVANLALAALLAMTFFRIAVHHCATLGREARLGLAGAVLVFVFSWAQKENFTWGFQSQWFAVYLFALLAFHA LDRTAEALAQSERAKSHGWLAVALISATVAAYSMSSGVLVFPVLIVQAIYRRLRRRDLTVICAVTVAVWVVYFVDWQKSA SSGDLMTSLPQHPFAALQYMLLYLGAPAFNVRLGVPASYVTGALALTALAVYSINAVKSGESRPRGVSLLAFALFVTGNA LLTASGRLWFGLGTALASRYTTASLMGWLAIGIFAVLNVEAGKQCRRVLFVTVLATLLVASGQRLSFRADRDVSYARLVA GLALRAHVYDPDITKAVYPFPEILVNDAKLAEAAQLSIFAPNQPDYLVAPVTVDPTVLCDGSLDRISATTTPGVYRATGW IYETARGHTPRAVVLTDATTHATLGTGVTGGERNDLRGTYSGNALHSGWTAFFTAPASGGIRVNGQTAGDEYCALAADRP MSATLQIPAR
Sequences:
>Translated_570_residues MSRGERIGNFAVFALGVFTLTTTTLGVWQHFSPLPFGDSWDGAIGFYMRAIQNPWHAFFEQHNEHRLAFSRLIFFADVRF FGGRNVFSLVANLALAALLAMTFFRIAVHHCATLGREARLGLAGAVLVFVFSWAQKENFTWGFQSQWFAVYLFALLAFHA LDRTAEALAQSERAKSHGWLAVALISATVAAYSMSSGVLVFPVLIVQAIYRRLRRRDLTVICAVTVAVWVVYFVDWQKSA SSGDLMTSLPQHPFAALQYMLLYLGAPAFNVRLGVPASYVTGALALTALAVYSINAVKSGESRPRGVSLLAFALFVTGNA LLTASGRLWFGLGTALASRYTTASLMGWLAIGIFAVLNVEAGKQCRRVLFVTVLATLLVASGQRLSFRADRDVSYARLVA GLALRAHVYDPDITKAVYPFPEILVNDAKLAEAAQLSIFAPNQPDYLVAPVTVDPTVLCDGSLDRISATTTPGVYRATGW IYETARGHTPRAVVLTDATTHATLGTGVTGGERNDLRGTYSGNALHSGWTAFFTAPASGGIRVNGQTAGDEYCALAADRP MSATLQIPAR >Mature_569_residues SRGERIGNFAVFALGVFTLTTTTLGVWQHFSPLPFGDSWDGAIGFYMRAIQNPWHAFFEQHNEHRLAFSRLIFFADVRFF GGRNVFSLVANLALAALLAMTFFRIAVHHCATLGREARLGLAGAVLVFVFSWAQKENFTWGFQSQWFAVYLFALLAFHAL DRTAEALAQSERAKSHGWLAVALISATVAAYSMSSGVLVFPVLIVQAIYRRLRRRDLTVICAVTVAVWVVYFVDWQKSAS SGDLMTSLPQHPFAALQYMLLYLGAPAFNVRLGVPASYVTGALALTALAVYSINAVKSGESRPRGVSLLAFALFVTGNAL LTASGRLWFGLGTALASRYTTASLMGWLAIGIFAVLNVEAGKQCRRVLFVTVLATLLVASGQRLSFRADRDVSYARLVAG LALRAHVYDPDITKAVYPFPEILVNDAKLAEAAQLSIFAPNQPDYLVAPVTVDPTVLCDGSLDRISATTTPGVYRATGWI YETARGHTPRAVVLTDATTHATLGTGVTGGERNDLRGTYSGNALHSGWTAFFTAPASGGIRVNGQTAGDEYCALAADRPM SATLQIPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61732; Mature: 61600
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGERIGNFAVFALGVFTLTTTTLGVWQHFSPLPFGDSWDGAIGFYMRAIQNPWHAFFE CCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH QHNEHRLAFSRLIFFADVRFFGGRNVFSLVANLALAALLAMTFFRIAVHHCATLGREARL HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC GLAGAVLVFVFSWAQKENFTWGFQSQWFAVYLFALLAFHALDRTAEALAQSERAKSHGWL CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AVALISATVAAYSMSSGVLVFPVLIVQAIYRRLRRRDLTVICAVTVAVWVVYFVDWQKSA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC SSGDLMTSLPQHPFAALQYMLLYLGAPAFNVRLGVPASYVTGALALTALAVYSINAVKSG CCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC ESRPRGVSLLAFALFVTGNALLTASGRLWFGLGTALASRYTTASLMGWLAIGIFAVLNVE CCCCCCHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AGKQCRRVLFVTVLATLLVASGQRLSFRADRDVSYARLVAGLALRAHVYDPDITKAVYPF HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCCCCCHHHCCC PEILVNDAKLAEAAQLSIFAPNQPDYLVAPVTVDPTVLCDGSLDRISATTTPGVYRATGW HHHHCCCHHHHHHHEEEEECCCCCCEEEEEEEECCEEEECCCCHHCCCCCCCCCEEECCE IYETARGHTPRAVVLTDATTHATLGTGVTGGERNDLRGTYSGNALHSGWTAFFTAPASGG EEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC IRVNGQTAGDEYCALAADRPMSATLQIPAR EEECCCCCCCCEEEEECCCCCCEEEECCCC >Mature Secondary Structure SRGERIGNFAVFALGVFTLTTTTLGVWQHFSPLPFGDSWDGAIGFYMRAIQNPWHAFFE CCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH QHNEHRLAFSRLIFFADVRFFGGRNVFSLVANLALAALLAMTFFRIAVHHCATLGREARL HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC GLAGAVLVFVFSWAQKENFTWGFQSQWFAVYLFALLAFHALDRTAEALAQSERAKSHGWL CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AVALISATVAAYSMSSGVLVFPVLIVQAIYRRLRRRDLTVICAVTVAVWVVYFVDWQKSA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC SSGDLMTSLPQHPFAALQYMLLYLGAPAFNVRLGVPASYVTGALALTALAVYSINAVKSG CCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC ESRPRGVSLLAFALFVTGNALLTASGRLWFGLGTALASRYTTASLMGWLAIGIFAVLNVE CCCCCCHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AGKQCRRVLFVTVLATLLVASGQRLSFRADRDVSYARLVAGLALRAHVYDPDITKAVYPF HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCCCCCHHHCCC PEILVNDAKLAEAAQLSIFAPNQPDYLVAPVTVDPTVLCDGSLDRISATTTPGVYRATGW HHHHCCCHHHHHHHEEEEECCCCCCEEEEEEEECCEEEECCCCHHCCCCCCCCCEEECCE IYETARGHTPRAVVLTDATTHATLGTGVTGGERNDLRGTYSGNALHSGWTAFFTAPASGG EEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC IRVNGQTAGDEYCALAADRPMSATLQIPAR EEECCCCCCCCEEEEECCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA