| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782056
Identifier: 91782056
GI number: 91782056
Start: 762893
End: 763831
Strand: Reverse
Name: 91782056
Synonym: Bxe_A3788
Alternate gene names: NA
Gene position: 763831-762893 (Counterclockwise)
Preceding gene: 91782057
Following gene: 91782055
Centisome position: 15.6
GC content: 56.66
Gene sequence:
>939_bases ATGAACCAAACCCGCATTCTTCTTCCAGGCGGCGCCGGCCTTGTCGGCCAGAACCTCGTCGCGCGACTGAAAGCGCGCGG GTATAGCAATCTGGTCGTGATCGACAAGCATAAGGCCAACCTCGAAGTGCTTCGCCAGGTCCATCCGGACGTCACGGCAA TTTACGCCGATCTGGCCGAGCGAGGCGAATGGGAACAGCACTTCAAGGCTGCCGATCTCGTCGTCATGTTGCAGGCGCAG ATCGGCGCACCGACGCTCGAGCCGTTCATTCGCAACAACATCACGTCGACGCGAAATCTGCTTGAGGTGATCAAGCGTTA CCAGATCCCGTACACCGTACACATCAGCTCCTCGGTCGTGAATTCGGTCGGCGAAGATTTCTATACGGACACCAAACGCG AGCAGGAGGAAATCGTGCTCGCGTCGGGCATCGAATGCGTCGTGCTGCGGCCCACTTTGATGTTTGGCTGGTTCGACCGC AAACATCTGGGCTGGCTGTCGCGCTTCATGCATCGCGTTCCGGTATTTCCGATTCCGGGCAGCGGACGCTACATGCGCCA GCCGTTGTACGTCGGAGACTTCTGCAACGTGATCATCAGTTGCATCGAATCGCGCATCAAAGGCCAAGCGTTCAACATTA CCGGGCTGGAGCGCGTCGACTATATCGACATCATTCGACAGATCAAGCGCGCCACGAAAGCCCGCTGTGCGATCGTCCGG ATTCCCTACGGCCTCTTCTATGTGCTGCTGAAGGTCTATGCGCTCTTCAGCAAGAATCCGCCCTTTACCGCCGACCAGCT CAAAGCACTGACGGCCGGTGACGAATTCGAAGTGATCGACTGGGAGGGCATCTTTAAGATCCGTGCTACTCCGTTTGCGA AGGCAATGGACGAAACCTTCAACGATCCAACGTATAGCCATATCGCACTTGAATTCTGA
Upstream 100 bases:
>100_bases GCCACGTCGTCAAACCAGGCATTTTTCTAGACGTTTCGGGCTTGCTTGTATGATCTAGCCCTCACAAAGTTGCAGAACAC CCCTATTCAACGAGCTCCGT
Downstream 100 bases:
>100_bases GGCGGACGAACACTATGAGCGCAGAACGTATTGCAGTACTGGGCGCCGGCCCCATGGGTCTCGGCGCGGCCTATCAGCTC GTCAAAGACGGCCGCAAGCC
Product: putative transmembrane oxidoreductase protein
Products: NA
Alternate protein names: NADH-Ubiquinone Oxidoreductase; NADH Dehydrogenase; NAD Dependent Epimerase/Dehydratase/Dehydrogenase; Oxidoreductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH Dehydrogenase 1 Alpha Subcomplex; DTDP-Glucose 4 6-Dehydratase; NmrA-Like Protein; Nucleoside-Diphosphate-Sugar Epimerase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Transmembrane Oxidoreductase Protein; NADH-Ubiquinone Oxidoreductase Family Protein; Methyltransferase FkbM; NADH Dehydrogenase-Like Protein; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Ubiquinone Oxidoreductase Subunit
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MNQTRILLPGGAGLVGQNLVARLKARGYSNLVVIDKHKANLEVLRQVHPDVTAIYADLAERGEWEQHFKAADLVVMLQAQ IGAPTLEPFIRNNITSTRNLLEVIKRYQIPYTVHISSSVVNSVGEDFYTDTKREQEEIVLASGIECVVLRPTLMFGWFDR KHLGWLSRFMHRVPVFPIPGSGRYMRQPLYVGDFCNVIISCIESRIKGQAFNITGLERVDYIDIIRQIKRATKARCAIVR IPYGLFYVLLKVYALFSKNPPFTADQLKALTAGDEFEVIDWEGIFKIRATPFAKAMDETFNDPTYSHIALEF
Sequences:
>Translated_312_residues MNQTRILLPGGAGLVGQNLVARLKARGYSNLVVIDKHKANLEVLRQVHPDVTAIYADLAERGEWEQHFKAADLVVMLQAQ IGAPTLEPFIRNNITSTRNLLEVIKRYQIPYTVHISSSVVNSVGEDFYTDTKREQEEIVLASGIECVVLRPTLMFGWFDR KHLGWLSRFMHRVPVFPIPGSGRYMRQPLYVGDFCNVIISCIESRIKGQAFNITGLERVDYIDIIRQIKRATKARCAIVR IPYGLFYVLLKVYALFSKNPPFTADQLKALTAGDEFEVIDWEGIFKIRATPFAKAMDETFNDPTYSHIALEF >Mature_312_residues MNQTRILLPGGAGLVGQNLVARLKARGYSNLVVIDKHKANLEVLRQVHPDVTAIYADLAERGEWEQHFKAADLVVMLQAQ IGAPTLEPFIRNNITSTRNLLEVIKRYQIPYTVHISSSVVNSVGEDFYTDTKREQEEIVLASGIECVVLRPTLMFGWFDR KHLGWLSRFMHRVPVFPIPGSGRYMRQPLYVGDFCNVIISCIESRIKGQAFNITGLERVDYIDIIRQIKRATKARCAIVR IPYGLFYVLLKVYALFSKNPPFTADQLKALTAGDEFEVIDWEGIFKIRATPFAKAMDETFNDPTYSHIALEF
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35497; Mature: 35497
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTRILLPGGAGLVGQNLVARLKARGYSNLVVIDKHKANLEVLRQVHPDVTAIYADLAE CCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHH RGEWEQHFKAADLVVMLQAQIGAPTLEPFIRNNITSTRNLLEVIKRYQIPYTVHISSSVV CCCHHHHHHHHHHHEEEEHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHH NSVGEDFYTDTKREQEEIVLASGIECVVLRPTLMFGWFDRKHLGWLSRFMHRVPVFPIPG HHHHHHHHCCCCCHHHHHHEECCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEECCC SGRYMRQPLYVGDFCNVIISCIESRIKGQAFNITGLERVDYIDIIRQIKRATKARCAIVR CCCHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHCEEEEE IPYGLFYVLLKVYALFSKNPPFTADQLKALTAGDEFEVIDWEGIFKIRATPFAKAMDETF CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHC NDPTYSHIALEF CCCCCCEEEEEC >Mature Secondary Structure MNQTRILLPGGAGLVGQNLVARLKARGYSNLVVIDKHKANLEVLRQVHPDVTAIYADLAE CCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHH RGEWEQHFKAADLVVMLQAQIGAPTLEPFIRNNITSTRNLLEVIKRYQIPYTVHISSSVV CCCHHHHHHHHHHHEEEEHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHH NSVGEDFYTDTKREQEEIVLASGIECVVLRPTLMFGWFDRKHLGWLSRFMHRVPVFPIPG HHHHHHHHCCCCCHHHHHHEECCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEECCC SGRYMRQPLYVGDFCNVIISCIESRIKGQAFNITGLERVDYIDIIRQIKRATKARCAIVR CCCHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHCEEEEE IPYGLFYVLLKVYALFSKNPPFTADQLKALTAGDEFEVIDWEGIFKIRATPFAKAMDETF CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHC NDPTYSHIALEF CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA