Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91781987

Identifier: 91781987

GI number: 91781987

Start: 680295

End: 682034

Strand: Direct

Name: 91781987

Synonym: Bxe_A3857

Alternate gene names: NA

Gene position: 680295-682034 (Clockwise)

Preceding gene: 91781986

Following gene: 91781990

Centisome position: 13.9

GC content: 63.91

Gene sequence:

>1740_bases
ATGTTCATCGATACGCGTACTGTTGAACAAAACACGGTCATTGAAACGACGGTCTGCATCATCGGCGCAGGCGTCGCGGG
AATTACGCTTGCGCTCGAAATGTCGCGGGCCGGTATCGATGCCTGCGTGCTCGAAAGCGGTGGCTTTGGACCCGACGACG
CGACCCGCGATCTGTATCGCGGCGAGAACATCGGGCTTCCCTACACGTTTGCGGACGGCTCGCGCAGCCGGTATTTCGGC
GGCAGCAGCAACTGCTGGGGCGGCTGGTGCCGCCCGCTCGATCCCTGGGACTTCGAAAAGCGCGACTGGATCGCGCACAG
CGGCTGGCCGTTCGGGCTCGATGAACTGGCGCCCTACTATGCGCGCACGCACGAACTGCTGAAGCTCGGCCCGCAGAATT
TCGACCCCGCATACTGGGAGCGCGAGATCGGTCGCCAGGACGTGCGCCGCCTGCCGCTCGCCACCGGCGATATGCGCGAT
ACCGTTGCGCAGTTCAGCCCGCCGGTGCGCTTCGGCAAGGCGTATCGCGAGGAACTCTCGCGCTCCACGCGGGTGCGTGT
GTTTCTCCATGCGAACGTGCTCAATATCGACGCCGACGCACAGGGCACGGCAATTTCCAGGGTGAAGATCGGCACGATCA
GCGGCCGCCGGCTCACGATGACCGCGAGGATTTTCGTGCTGGCCACGGGCGGCATCGAAAACGCGCGCCTGCTGCTCGCG
TCGAACAACGTGCAGGCCGCCGGCCTCGGCAATGCCAACGACCTGGTCGGCCGCTATTTCATGGATCATCCGCGCATGAT
GTCGGGCAAGGTGCGCTTCCGTCCGGGCATTGCGCGCAACAAGCTGTACGACATCAAGTATCACTACCAGAATGCGGCGG
TGTCGGCGCACGGCACGAAGATCTCGTCACAGTTCGCGCCGAAACAGGAATGGATGGAGCGCGAGAAGCTGCTCAATTCA
CGCGTCTGGCTCTATTCGAAATGGTATGGCGAAGGCAGCGCGGGTTCCGAGGCGTTGATCCGCCTCAAGGAAGCGCTGAT
GGGCAAGGACCAGCCGGGTCGCAGCCTGAAGCGCGACATCGAGACCATGATTGCGCACCCGCTGCACACCGTCGGTTTTG
GTTTGACCCGGCTGTTGCAATGGCCCGCGCTGATTACCGACGTGACGCTGCAGGCTATCGTCGAAGCGGTGCCCAATCCG
GATAGCCGCGTCACATTGTCGGCGGACAGGCGCGACCACTTCGGCATGCCGCGCGTGCGGGTGGAGTGGCGCCTCGGCGA
ACAGGTGCAGCGCACTTTCGACAAGACGTTCCAGTTGCTCGCGCAGGAATTGCAGATGGCGAACGTCGCGGACGTCACGC
TCGACGAGTCGCTCGAAGGCCGGACGTGGCCGGCGAAACTGGAAGGCACGTGGCACCACATGGGCACCACGCGCATGCAC
GACTCGCCGCGCGAGGGCGTGGTCGATCGCGATTGCAAGGTGCACGGGATCAGCAACCTGTACATTGGCGGCAGTTCGGT
GTTTCCGACTGTCGGCGCCAACTTCCCGACCATCACGATTGCCGCGCTGGCGCTGCGCCTCGCCGGTCATCTGAAACGGC
AGCTCGATTTGCCGGAACTCGTCGGCATTACACGGGGCGACGCCGCGAACAGCGCCGCCATGTCGCTTCAGGCGCCGCCT
CAGGTCGACACGTTGCCGATCGCCGCCTCGACCCTGACGCCGTTGATGAAGGAACAGTGA

Upstream 100 bases:

>100_bases
AGGCAGGGTCCGGTTGCGACGTTTGCGTGGCCCGGTTGCCAGCTCCGACTGGCGAACCGTGACGCGCTCAGGAAATGCGT
GAAGAAGATGGGAGTAGGGG

Downstream 100 bases:

>100_bases
ACGCGCAATGAAGACGGCCGAAGCGGGCGCACGTGGAGTGCGTCGGCTTCGCTTTGGTGAGTGGCAGAGCCGCGAGCCCG
TCGTGAGCCTGCTGCGCTTT

Product: putative oxidoreductase

Products: NA

Alternate protein names: GMC Oxidoreductase; FAD Dependent Oxidoreductase; Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Choline Dehydrogenase; NAD-Dependent Epimerase/Dehydratase; GMC Family Oxidoreductase; Glucose-Methanol-Choline Family Oxidoreductase; GMC Oxidoreductase Family; Oxidoreductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Dehydrogenase; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Solbitol Dehydrogenase Large Subunit; Capsular Polysaccharide Biosynthesis Oxidoreductase

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MFIDTRTVEQNTVIETTVCIIGAGVAGITLALEMSRAGIDACVLESGGFGPDDATRDLYRGENIGLPYTFADGSRSRYFG
GSSNCWGGWCRPLDPWDFEKRDWIAHSGWPFGLDELAPYYARTHELLKLGPQNFDPAYWEREIGRQDVRRLPLATGDMRD
TVAQFSPPVRFGKAYREELSRSTRVRVFLHANVLNIDADAQGTAISRVKIGTISGRRLTMTARIFVLATGGIENARLLLA
SNNVQAAGLGNANDLVGRYFMDHPRMMSGKVRFRPGIARNKLYDIKYHYQNAAVSAHGTKISSQFAPKQEWMEREKLLNS
RVWLYSKWYGEGSAGSEALIRLKEALMGKDQPGRSLKRDIETMIAHPLHTVGFGLTRLLQWPALITDVTLQAIVEAVPNP
DSRVTLSADRRDHFGMPRVRVEWRLGEQVQRTFDKTFQLLAQELQMANVADVTLDESLEGRTWPAKLEGTWHHMGTTRMH
DSPREGVVDRDCKVHGISNLYIGGSSVFPTVGANFPTITIAALALRLAGHLKRQLDLPELVGITRGDAANSAAMSLQAPP
QVDTLPIAASTLTPLMKEQ

Sequences:

>Translated_579_residues
MFIDTRTVEQNTVIETTVCIIGAGVAGITLALEMSRAGIDACVLESGGFGPDDATRDLYRGENIGLPYTFADGSRSRYFG
GSSNCWGGWCRPLDPWDFEKRDWIAHSGWPFGLDELAPYYARTHELLKLGPQNFDPAYWEREIGRQDVRRLPLATGDMRD
TVAQFSPPVRFGKAYREELSRSTRVRVFLHANVLNIDADAQGTAISRVKIGTISGRRLTMTARIFVLATGGIENARLLLA
SNNVQAAGLGNANDLVGRYFMDHPRMMSGKVRFRPGIARNKLYDIKYHYQNAAVSAHGTKISSQFAPKQEWMEREKLLNS
RVWLYSKWYGEGSAGSEALIRLKEALMGKDQPGRSLKRDIETMIAHPLHTVGFGLTRLLQWPALITDVTLQAIVEAVPNP
DSRVTLSADRRDHFGMPRVRVEWRLGEQVQRTFDKTFQLLAQELQMANVADVTLDESLEGRTWPAKLEGTWHHMGTTRMH
DSPREGVVDRDCKVHGISNLYIGGSSVFPTVGANFPTITIAALALRLAGHLKRQLDLPELVGITRGDAANSAAMSLQAPP
QVDTLPIAASTLTPLMKEQ
>Mature_579_residues
MFIDTRTVEQNTVIETTVCIIGAGVAGITLALEMSRAGIDACVLESGGFGPDDATRDLYRGENIGLPYTFADGSRSRYFG
GSSNCWGGWCRPLDPWDFEKRDWIAHSGWPFGLDELAPYYARTHELLKLGPQNFDPAYWEREIGRQDVRRLPLATGDMRD
TVAQFSPPVRFGKAYREELSRSTRVRVFLHANVLNIDADAQGTAISRVKIGTISGRRLTMTARIFVLATGGIENARLLLA
SNNVQAAGLGNANDLVGRYFMDHPRMMSGKVRFRPGIARNKLYDIKYHYQNAAVSAHGTKISSQFAPKQEWMEREKLLNS
RVWLYSKWYGEGSAGSEALIRLKEALMGKDQPGRSLKRDIETMIAHPLHTVGFGLTRLLQWPALITDVTLQAIVEAVPNP
DSRVTLSADRRDHFGMPRVRVEWRLGEQVQRTFDKTFQLLAQELQMANVADVTLDESLEGRTWPAKLEGTWHHMGTTRMH
DSPREGVVDRDCKVHGISNLYIGGSSVFPTVGANFPTITIAALALRLAGHLKRQLDLPELVGITRGDAANSAAMSLQAPP
QVDTLPIAASTLTPLMKEQ

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64330; Mature: 64330

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIDTRTVEQNTVIETTVCIIGAGVAGITLALEMSRAGIDACVLESGGFGPDDATRDLYR
CCCCCCCCCCCCCCEEEHHHHCCCHHHEEEEEEHHHCCCCEEEEECCCCCCCHHHHHHHC
GENIGLPYTFADGSRSRYFGGSSNCWGGWCRPLDPWDFEKRDWIAHSGWPFGLDELAPYY
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHH
ARTHELLKLGPQNFDPAYWEREIGRQDVRRLPLATGDMRDTVAQFSPPVRFGKAYREELS
HHHHHHHHCCCCCCCHHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHC
RSTRVRVFLHANVLNIDADAQGTAISRVKIGTISGRRLTMTARIFVLATGGIENARLLLA
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEE
SNNVQAAGLGNANDLVGRYFMDHPRMMSGKVRFRPGIARNKLYDIKYHYQNAAVSAHGTK
ECCEEEECCCCHHHHHHHHHHCCCCHHCCEEEECCCCCCCCEEEEEEEECCCEEEECCCC
ISSQFAPKQEWMEREKLLNSRVWLYSKWYGEGSAGSEALIRLKEALMGKDQPGRSLKRDI
CCHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
ETMIAHPLHTVGFGLTRLLQWPALITDVTLQAIVEAVPNPDSRVTLSADRRDHFGMPRVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEE
VEWRLGEQVQRTFDKTFQLLAQELQMANVADVTLDESLEGRTWPAKLEGTWHHMGTTRMH
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCCEEECCCCCCC
DSPREGVVDRDCKVHGISNLYIGGSSVFPTVGANFPTITIAALALRLAGHLKRQLDLPEL
CCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VGITRGDAANSAAMSLQAPPQVDTLPIAASTLTPLMKEQ
HCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFIDTRTVEQNTVIETTVCIIGAGVAGITLALEMSRAGIDACVLESGGFGPDDATRDLYR
CCCCCCCCCCCCCCEEEHHHHCCCHHHEEEEEEHHHCCCCEEEEECCCCCCCHHHHHHHC
GENIGLPYTFADGSRSRYFGGSSNCWGGWCRPLDPWDFEKRDWIAHSGWPFGLDELAPYY
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHH
ARTHELLKLGPQNFDPAYWEREIGRQDVRRLPLATGDMRDTVAQFSPPVRFGKAYREELS
HHHHHHHHCCCCCCCHHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHC
RSTRVRVFLHANVLNIDADAQGTAISRVKIGTISGRRLTMTARIFVLATGGIENARLLLA
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEE
SNNVQAAGLGNANDLVGRYFMDHPRMMSGKVRFRPGIARNKLYDIKYHYQNAAVSAHGTK
ECCEEEECCCCHHHHHHHHHHCCCCHHCCEEEECCCCCCCCEEEEEEEECCCEEEECCCC
ISSQFAPKQEWMEREKLLNSRVWLYSKWYGEGSAGSEALIRLKEALMGKDQPGRSLKRDI
CCHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
ETMIAHPLHTVGFGLTRLLQWPALITDVTLQAIVEAVPNPDSRVTLSADRRDHFGMPRVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEE
VEWRLGEQVQRTFDKTFQLLAQELQMANVADVTLDESLEGRTWPAKLEGTWHHMGTTRMH
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCCEEECCCCCCC
DSPREGVVDRDCKVHGISNLYIGGSSVFPTVGANFPTITIAALALRLAGHLKRQLDLPEL
CCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VGITRGDAANSAAMSLQAPPQVDTLPIAASTLTPLMKEQ
HCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA