| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781971
Identifier: 91781971
GI number: 91781971
Start: 659927
End: 662317
Strand: Reverse
Name: 91781971
Synonym: Bxe_A3873
Alternate gene names: NA
Gene position: 662317-659927 (Counterclockwise)
Preceding gene: 91781972
Following gene: 91781969
Centisome position: 13.53
GC content: 65.62
Gene sequence:
>2391_bases ATGCGACCATCGGCAATCAGGCTCGTTCGCGATTCATTCATTGCGTGCTTCGCGTTGTTCGTCTTCGCCTTCCTGCCAGC ATCCGCACACGCGGCGGACTGCGGCGCCGGCACGCTGGTCACCGTGGTCGCGCATCTCGACGACGATCTGCTTTTCGTGG ACCCCGCCATCAGCGAGCGTCTCGACGCGAGATGGTGCATCACCACCGTGCATCTGATCGGCGGCGCCAACGGCGCGGAC TTCGCGTATGTTCAAACCCGCGAGCGGGCTTCGCGTCTCGCCTACGCACGCATGGCGGGTGTGCCTGACGAGTGGCTCGA ATCCAATGTGACGATTGCCGGCAAGCTCGTGCACCAGATGGTGCTCAAGGCGAGGCCGCAAGTGCGCCTGCTCGAACTGC GCCTGCCCGGCGGCGCCGTGCGCGGCGGCCGCGAACCGCTTGGCCTGCTGTGGGAACAACACGCAACGCTCTCCACTTAT CCGATGAACGCGGACGGCTCCGTGCGCGTGAAGTACGATCGCGATGCCTTGTCGGCCACCTTGAAAGCGATACTCGCGCA GGCCACGCTGATCTATACGCTCAATCCGGACACCGTGCCGTTTATCGAGCATCCCGATCATATCTACGCCGCGCGTATCA CCCGCCACGTCGCCCAGACGCTCGGCAAGAGCGTGCCGATCGTCTACCACGTCACCTATCCGACCGGCGGCTGGCCAGGC AATCTTCCCGCAGCCGAAGTGCAGCGCAAGCGCGACATCGTCGCCAGTTATTTTTCGATCGACGGCAGCGAATCGTCGCA TGTGTTCGGTGAGTTTCAATGGGACGGTAACTGGATTTCGCGCCGCTATGCGTTTGCCGATCGCACCGATCGCCGCGTAC CGGATTTCGTGTCTCATCCAATTCAGCTCTTCAACGCGGCGGCGAGCCGCTGCCTGAGCTCCGCGGGTCCTGGACGCGCG CCGGCACTTGCCGCGTGCACGGGTTCGCCGGCTCAGCAATGGCGGTGGGACCCGCTCACCGTCTATCCCGGCAACGCACG CAACGCGGCGCTCGTGAGCGTCGCGACTTCGCAATGTATTGCCGAGCGCGACGGCTATCTGGTCGCCGAGACCTGCGATC AATGGGACATGGCGCAGCGCTGGACGCCGTGGGACTTCGGCCTCGTCTATACGCCGATGCGCCATTGCCTCGGCGAAAAC GACGGCAAGCTGACCATGCGCGGCTGCACCGCGCTCACCACGCGCTACCGTTGGGCCACCACGCAACGCACCCAGGCGAA CGATCTGAGGCTCGCCACGGCGATGACAGGTGACATCGCCGGCTCGGGCGAGCAATCGGTGGTGTACGTTCAGCGGCAAC ACGACGGCCCGGGCTTCAACGTGTATGCCGCGTCGCTCGCCAATGCGTCGCCGCCCGCGCTGTGGTATGCCAACGTCGTG CCGTTCGATCCGCAGGCCACCGCGCCGAGCTGCGCCGGCGACAGACTGTGCTTCGACAGCGTGCGCTTCCTGCTCGGCGA TTTCGACGGCGACGGCAAGGCTGACCTGATGATCGTCGCGGCACGCGAGGGCGGCACCGCGTTCTGGCTGCTTCGCAGTG CCGGCGACCACTTCGAGGCGCCGCGCCTGTGGCTGCAAACCAGCAATGCGTTCAGGCCGGAGCTGACGCAGCAGTATGTG GCCGCGGACTTCACCGCTACGGGACGGGCCAGCGTGCTGATCGCGCAGAAACGGGCCGACAGCGGACTCGATCTGTGGAT GGCGTCGCCGCAACGATCAGGAGGCCCGGCGGGATCAGCGCCGACGCTTTGGGCACAGGCCAGAAGCCTGCCGCAGAACG TCAACCTGCTGGTGCGTGAAACGGTGGGCGCGCGCGCCGCGCTGGTCGCGGTGAGCAGCACGAATGGACGCCTCGCGCTC ACGCCCATCGCCAACGAGGGGGCACGCATGAGCGTCGGCGAGCGCAACGTCTTGCCGGCGAGTTTCGACCCGGACTTCGT GAAAGTAACGATGGGCGCCGTGCATGGCCGCGACAGCAACACGTTGATTCTGCTGACGCCGCATCTCGGCGAATCGAGCG AAGAAGCGATGATCGACGTCGCCACGCTCGACACGAGCGGCGCGGGCAATACACCGGCCCAGGCGGCGACATTGCATGGC TTGTCGTGGTCGGATGTCTTTCCGGCATTCGTGCGCGACAAGCAAGGCGCGGCACTCGTGCTGTTTCGACGCACCGACGC CACCCTCGGCGATTTCTATTTCACCGGCGGCGCGCCGGCGTTGTCGCGTTATCCGTCAGGAAACGGACTCGCGCTGGGCG AAGCTCAGGAACTCGGCAAGCTGCCGGGGCTGTTCTCGGAGACAGTGCGCATCGACCGGCTCACGCAGTAG
Upstream 100 bases:
>100_bases TCATGCCGGACTGCAATGTGGCGCCGACTGTGAGTTCGGTAACGTGACGGCCAGGGCCGCTACAGTATGATTCGAGCTCA CCGTCAGGGCTCGAATCACT
Downstream 100 bases:
>100_bases CGCGCGGGCCGGCCGATCCAGCCCGCGTCAGGCGGAAACCCGCAGCGGTTGAACGAACTTCCGCGCGATCGTCATGTAGC GATCCGCCGTGTCGTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: FG-GAP Repeat-Containing Protein; GlcNAc-PI De-N-Acetylase Family Protein; Ricin B Lectin
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MRPSAIRLVRDSFIACFALFVFAFLPASAHAADCGAGTLVTVVAHLDDDLLFVDPAISERLDARWCITTVHLIGGANGAD FAYVQTRERASRLAYARMAGVPDEWLESNVTIAGKLVHQMVLKARPQVRLLELRLPGGAVRGGREPLGLLWEQHATLSTY PMNADGSVRVKYDRDALSATLKAILAQATLIYTLNPDTVPFIEHPDHIYAARITRHVAQTLGKSVPIVYHVTYPTGGWPG NLPAAEVQRKRDIVASYFSIDGSESSHVFGEFQWDGNWISRRYAFADRTDRRVPDFVSHPIQLFNAAASRCLSSAGPGRA PALAACTGSPAQQWRWDPLTVYPGNARNAALVSVATSQCIAERDGYLVAETCDQWDMAQRWTPWDFGLVYTPMRHCLGEN DGKLTMRGCTALTTRYRWATTQRTQANDLRLATAMTGDIAGSGEQSVVYVQRQHDGPGFNVYAASLANASPPALWYANVV PFDPQATAPSCAGDRLCFDSVRFLLGDFDGDGKADLMIVAAREGGTAFWLLRSAGDHFEAPRLWLQTSNAFRPELTQQYV AADFTATGRASVLIAQKRADSGLDLWMASPQRSGGPAGSAPTLWAQARSLPQNVNLLVRETVGARAALVAVSSTNGRLAL TPIANEGARMSVGERNVLPASFDPDFVKVTMGAVHGRDSNTLILLTPHLGESSEEAMIDVATLDTSGAGNTPAQAATLHG LSWSDVFPAFVRDKQGAALVLFRRTDATLGDFYFTGGAPALSRYPSGNGLALGEAQELGKLPGLFSETVRIDRLTQ
Sequences:
>Translated_796_residues MRPSAIRLVRDSFIACFALFVFAFLPASAHAADCGAGTLVTVVAHLDDDLLFVDPAISERLDARWCITTVHLIGGANGAD FAYVQTRERASRLAYARMAGVPDEWLESNVTIAGKLVHQMVLKARPQVRLLELRLPGGAVRGGREPLGLLWEQHATLSTY PMNADGSVRVKYDRDALSATLKAILAQATLIYTLNPDTVPFIEHPDHIYAARITRHVAQTLGKSVPIVYHVTYPTGGWPG NLPAAEVQRKRDIVASYFSIDGSESSHVFGEFQWDGNWISRRYAFADRTDRRVPDFVSHPIQLFNAAASRCLSSAGPGRA PALAACTGSPAQQWRWDPLTVYPGNARNAALVSVATSQCIAERDGYLVAETCDQWDMAQRWTPWDFGLVYTPMRHCLGEN DGKLTMRGCTALTTRYRWATTQRTQANDLRLATAMTGDIAGSGEQSVVYVQRQHDGPGFNVYAASLANASPPALWYANVV PFDPQATAPSCAGDRLCFDSVRFLLGDFDGDGKADLMIVAAREGGTAFWLLRSAGDHFEAPRLWLQTSNAFRPELTQQYV AADFTATGRASVLIAQKRADSGLDLWMASPQRSGGPAGSAPTLWAQARSLPQNVNLLVRETVGARAALVAVSSTNGRLAL TPIANEGARMSVGERNVLPASFDPDFVKVTMGAVHGRDSNTLILLTPHLGESSEEAMIDVATLDTSGAGNTPAQAATLHG LSWSDVFPAFVRDKQGAALVLFRRTDATLGDFYFTGGAPALSRYPSGNGLALGEAQELGKLPGLFSETVRIDRLTQ >Mature_796_residues MRPSAIRLVRDSFIACFALFVFAFLPASAHAADCGAGTLVTVVAHLDDDLLFVDPAISERLDARWCITTVHLIGGANGAD FAYVQTRERASRLAYARMAGVPDEWLESNVTIAGKLVHQMVLKARPQVRLLELRLPGGAVRGGREPLGLLWEQHATLSTY PMNADGSVRVKYDRDALSATLKAILAQATLIYTLNPDTVPFIEHPDHIYAARITRHVAQTLGKSVPIVYHVTYPTGGWPG NLPAAEVQRKRDIVASYFSIDGSESSHVFGEFQWDGNWISRRYAFADRTDRRVPDFVSHPIQLFNAAASRCLSSAGPGRA PALAACTGSPAQQWRWDPLTVYPGNARNAALVSVATSQCIAERDGYLVAETCDQWDMAQRWTPWDFGLVYTPMRHCLGEN DGKLTMRGCTALTTRYRWATTQRTQANDLRLATAMTGDIAGSGEQSVVYVQRQHDGPGFNVYAASLANASPPALWYANVV PFDPQATAPSCAGDRLCFDSVRFLLGDFDGDGKADLMIVAAREGGTAFWLLRSAGDHFEAPRLWLQTSNAFRPELTQQYV AADFTATGRASVLIAQKRADSGLDLWMASPQRSGGPAGSAPTLWAQARSLPQNVNLLVRETVGARAALVAVSSTNGRLAL TPIANEGARMSVGERNVLPASFDPDFVKVTMGAVHGRDSNTLILLTPHLGESSEEAMIDVATLDTSGAGNTPAQAATLHG LSWSDVFPAFVRDKQGAALVLFRRTDATLGDFYFTGGAPALSRYPSGNGLALGEAQELGKLPGLFSETVRIDRLTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86108; Mature: 86108
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS50231 RICIN_B_LECTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSAIRLVRDSFIACFALFVFAFLPASAHAADCGAGTLVTVVAHLDDDLLFVDPAISER CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHH LDARWCITTVHLIGGANGADFAYVQTRERASRLAYARMAGVPDEWLESNVTIAGKLVHQM CCCEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHCCCEEHHHHHHHH VLKARPQVRLLELRLPGGAVRGGREPLGLLWEQHATLSTYPMNADGSVRVKYDRDALSAT HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHH LKAILAQATLIYTLNPDTVPFIEHPDHIYAARITRHVAQTLGKSVPIVYHVTYPTGGWPG HHHHHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC NLPAAEVQRKRDIVASYFSIDGSESSHVFGEFQWDGNWISRRYAFADRTDRRVPDFVSHP CCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHH IQLFNAAASRCLSSAGPGRAPALAACTGSPAQQWRWDPLTVYPGNARNAALVSVATSQCI HHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCEEEECCCCCCEEEEEEHHHHHH AERDGYLVAETCDQWDMAQRWTPWDFGLVYTPMRHCLGENDGKLTMRGCTALTTRYRWAT HHCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEHHEEEEEEC TQRTQANDLRLATAMTGDIAGSGEQSVVYVQRQHDGPGFNVYAASLANASPPALWYANVV CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEE PFDPQATAPSCAGDRLCFDSVRFLLGDFDGDGKADLMIVAAREGGTAFWLLRSAGDHFEA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCC PRLWLQTSNAFRPELTQQYVAADFTATGRASVLIAQKRADSGLDLWMASPQRSGGPAGSA CEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCC PTLWAQARSLPQNVNLLVRETVGARAALVAVSSTNGRLALTPIANEGARMSVGERNVLPA CHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCC SFDPDFVKVTMGAVHGRDSNTLILLTPHLGESSEEAMIDVATLDTSGAGNTPAQAATLHG CCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHEECC LSWSDVFPAFVRDKQGAALVLFRRTDATLGDFYFTGGAPALSRYPSGNGLALGEAQELGK CCHHHHCHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCHHHCCCCCCCEEECCHHHHHC LPGLFSETVRIDRLTQ CCCHHHHHEECCCCCC >Mature Secondary Structure MRPSAIRLVRDSFIACFALFVFAFLPASAHAADCGAGTLVTVVAHLDDDLLFVDPAISER CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHH LDARWCITTVHLIGGANGADFAYVQTRERASRLAYARMAGVPDEWLESNVTIAGKLVHQM CCCEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHCCCEEHHHHHHHH VLKARPQVRLLELRLPGGAVRGGREPLGLLWEQHATLSTYPMNADGSVRVKYDRDALSAT HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHH LKAILAQATLIYTLNPDTVPFIEHPDHIYAARITRHVAQTLGKSVPIVYHVTYPTGGWPG HHHHHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC NLPAAEVQRKRDIVASYFSIDGSESSHVFGEFQWDGNWISRRYAFADRTDRRVPDFVSHP CCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHH IQLFNAAASRCLSSAGPGRAPALAACTGSPAQQWRWDPLTVYPGNARNAALVSVATSQCI HHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCEEEECCCCCCEEEEEEHHHHHH AERDGYLVAETCDQWDMAQRWTPWDFGLVYTPMRHCLGENDGKLTMRGCTALTTRYRWAT HHCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEHHEEEEEEC TQRTQANDLRLATAMTGDIAGSGEQSVVYVQRQHDGPGFNVYAASLANASPPALWYANVV CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEE PFDPQATAPSCAGDRLCFDSVRFLLGDFDGDGKADLMIVAAREGGTAFWLLRSAGDHFEA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCC PRLWLQTSNAFRPELTQQYVAADFTATGRASVLIAQKRADSGLDLWMASPQRSGGPAGSA CEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCC PTLWAQARSLPQNVNLLVRETVGARAALVAVSSTNGRLALTPIANEGARMSVGERNVLPA CHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCC SFDPDFVKVTMGAVHGRDSNTLILLTPHLGESSEEAMIDVATLDTSGAGNTPAQAATLHG CCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHEECC LSWSDVFPAFVRDKQGAALVLFRRTDATLGDFYFTGGAPALSRYPSGNGLALGEAQELGK CCHHHHCHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCHHHCCCCCCCEEECCHHHHHC LPGLFSETVRIDRLTQ CCCHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA