| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hcrC [H]
Identifier: 91781958
GI number: 91781958
Start: 643972
End: 645495
Strand: Direct
Name: hcrC [H]
Synonym: Bxe_A3886
Alternate gene names: 91781958
Gene position: 643972-645495 (Clockwise)
Preceding gene: 91781957
Following gene: 91781959
Centisome position: 13.15
GC content: 65.03
Gene sequence:
>1524_bases ATGACTGAGCCGATTCGCTTCTATCACCGCAACGCGATCCGCGAGATCAAGGACGCGCCCGTCACCCGCACGGTCCTGCA ATATCTGCGCGAAGACGCGCATTGCACGGGCACCAAGGAAGGCTGCGCCGAAGGCGACTGCGGCGCATGCACGGTCGTGA TCGGCGAGCGCAACGAGGCGGGCGGCGTCGACTTCAAGGCGGTGAATGCCTGCATCCAGTTCGTGCCGACGCTCGACGGC AAAGCGCTCTTCACCGTCGAAGACCTGCGCCAGCCGGACGGCTCGCTGCATCCGGTACAGGAAGCGATGGTCGAATGTCA CGGCTCGCAGTGCGGTTTCTGCACGCCGGGCTTCGTCATGTCGATGTGGTCGCTCTACGAAAAGCACGGCCACGAGCACA GTTGCGCCAACAGGACGGTGCCGTCGCGTGAAGCGATCAGCAACGCGTTGACGGGCAATCTGTGCCGCTGCACGGGCTAC CGTCCGATCGTCGACGCGGCGGTACGCATGTTCGAAGCGCCCGCGCCGAAAGCGCCGGTGAACGTCGAAGCGCTCGTCCG CGCGCTCGGCACGCTCGAACGCACGGACACATTCCACTATGAGCACGCGGGCCAGCAGTTCGACGCGCCGCGCACGGTCG AGGCGCTCGCCAGGATCAAGGAAGCCGAACCGGCCACGCGCATTCTTGCCGGCAGCACGGACATTGGCCTGTGGGTCACC AAGCAGATGCGCGAGCTCGGCAACATCGTCTATGTGGGGCAGATCGCCGGGTTGCAGAAGCTCGAAACCAATGGCGAATG GATCGAGATCGGCGCGGGTGTCAGCGTCGAAAAGGCTTATGCGGAGATCGCGAAGCAATATCCCGAACTGAACGAAATGT GGCAACGCTTCGCGTCCCTGCCGATTCGCAATGCCGGCACGCTCGGCGGCAACATCGCCAACGGCTCGCCGATCGGCGAT TCGATGCCGGGTCTGATTGCACTCGGCGCGCGCGTGATCGTGCGCGGCGGCGAGATCGAGCGCGAAATGCCGCTCGAAGA TCTGTACCTCGCGTATCAGAAGAAGGACATGGCGGAGCACGAGTTCGTCGTCGGGCTGAAAGTGCCGACGCGCAGCGGCG TGCGTCAGAACCTGCAATTCCGCACCTACAAACTTTCGAAGCGTTTCGATTCGGACATCTCGGCGGTGTGCGCCGCTTTC GCTTTTATCGCCGACGGCAACCTGATCCGCGAGCCGCGCATCGCATTCGGCGGCATGGCCGCTACGTCCAAACGGGCGAC GCACGCGGAAGCCGTGCTGCGCGACGCCGAATGGCACGAAGCGACGGCGCAGGCGGCGATGCTCGCGCTCGGCAACGACT ACGCGCCGTTGTCCGACATGCGCGCGACCAGCAACTATCGCCTCGAATCGGCGAAGAACACGCTGTACCGCTTCTGGCTC GAAACGCGGCCGGACAATCCGCTGCCGAAGAGCGCGCTGGACGTGCGCGCGGTCGCCGCGGCCTGCGCGCCGGCCGGCGT CTGA
Upstream 100 bases:
>100_bases TGCGATCGGAGCTATGGGTTGTGTTTATTGACGGTGATAGTTTTCAAACCATCCCTGCTGCACGTCCCCGCGGACACAGA ACATTCGAGAGTAACGAGAC
Downstream 100 bases:
>100_bases AAAGCCCAAAGGATACGGAGAACACAACAATGAATCAGCAAGCCGAACCGTTCCTGAAAAACCTTCAGGATCCCGACGAC TTCACCCAGGTCCACATCTC
Product: putative xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTEPIRFYHRNAIREIKDAPVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVIGERNEAGGVDFKAVNACIQFVPTLDG KALFTVEDLRQPDGSLHPVQEAMVECHGSQCGFCTPGFVMSMWSLYEKHGHEHSCANRTVPSREAISNALTGNLCRCTGY RPIVDAAVRMFEAPAPKAPVNVEALVRALGTLERTDTFHYEHAGQQFDAPRTVEALARIKEAEPATRILAGSTDIGLWVT KQMRELGNIVYVGQIAGLQKLETNGEWIEIGAGVSVEKAYAEIAKQYPELNEMWQRFASLPIRNAGTLGGNIANGSPIGD SMPGLIALGARVIVRGGEIEREMPLEDLYLAYQKKDMAEHEFVVGLKVPTRSGVRQNLQFRTYKLSKRFDSDISAVCAAF AFIADGNLIREPRIAFGGMAATSKRATHAEAVLRDAEWHEATAQAAMLALGNDYAPLSDMRATSNYRLESAKNTLYRFWL ETRPDNPLPKSALDVRAVAAACAPAGV
Sequences:
>Translated_507_residues MTEPIRFYHRNAIREIKDAPVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVIGERNEAGGVDFKAVNACIQFVPTLDG KALFTVEDLRQPDGSLHPVQEAMVECHGSQCGFCTPGFVMSMWSLYEKHGHEHSCANRTVPSREAISNALTGNLCRCTGY RPIVDAAVRMFEAPAPKAPVNVEALVRALGTLERTDTFHYEHAGQQFDAPRTVEALARIKEAEPATRILAGSTDIGLWVT KQMRELGNIVYVGQIAGLQKLETNGEWIEIGAGVSVEKAYAEIAKQYPELNEMWQRFASLPIRNAGTLGGNIANGSPIGD SMPGLIALGARVIVRGGEIEREMPLEDLYLAYQKKDMAEHEFVVGLKVPTRSGVRQNLQFRTYKLSKRFDSDISAVCAAF AFIADGNLIREPRIAFGGMAATSKRATHAEAVLRDAEWHEATAQAAMLALGNDYAPLSDMRATSNYRLESAKNTLYRFWL ETRPDNPLPKSALDVRAVAAACAPAGV >Mature_506_residues TEPIRFYHRNAIREIKDAPVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVIGERNEAGGVDFKAVNACIQFVPTLDGK ALFTVEDLRQPDGSLHPVQEAMVECHGSQCGFCTPGFVMSMWSLYEKHGHEHSCANRTVPSREAISNALTGNLCRCTGYR PIVDAAVRMFEAPAPKAPVNVEALVRALGTLERTDTFHYEHAGQQFDAPRTVEALARIKEAEPATRILAGSTDIGLWVTK QMRELGNIVYVGQIAGLQKLETNGEWIEIGAGVSVEKAYAEIAKQYPELNEMWQRFASLPIRNAGTLGGNIANGSPIGDS MPGLIALGARVIVRGGEIEREMPLEDLYLAYQKKDMAEHEFVVGLKVPTRSGVRQNLQFRTYKLSKRFDSDISAVCAAFA FIADGNLIREPRIAFGGMAATSKRATHAEAVLRDAEWHEATAQAAMLALGNDYAPLSDMRATSNYRLESAKNTLYRFWLE TRPDNPLPKSALDVRAVAAACAPAGV
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG4630
COG function: function code F; Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=519, Percent_Identity=27.7456647398844, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI71773480, Length=473, Percent_Identity=25.5813953488372, Blast_Score=138, Evalue=1e-32, Organism=Escherichia coli, GI1786480, Length=156, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1789231, Length=252, Percent_Identity=26.984126984127, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789232, Length=143, Percent_Identity=35.6643356643357, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17540638, Length=161, Percent_Identity=45.3416149068323, Blast_Score=132, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17539860, Length=163, Percent_Identity=40.4907975460123, Blast_Score=118, Evalue=9e-27, Organism=Caenorhabditis elegans, GI32566215, Length=144, Percent_Identity=41.6666666666667, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI17737937, Length=489, Percent_Identity=31.2883435582822, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24647201, Length=505, Percent_Identity=28.1188118811881, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24647199, Length=501, Percent_Identity=27.3453093812375, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24647197, Length=503, Percent_Identity=27.8330019880716, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24647195, Length=321, Percent_Identity=31.4641744548287, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24647193, Length=501, Percent_Identity=27.5449101796407, Blast_Score=147, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR017606 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 55419; Mature: 55287
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00197 2FE2S_FER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPIRFYHRNAIREIKDAPVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVIGERNEA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC GGVDFKAVNACIQFVPTLDGKALFTVEDLRQPDGSLHPVQEAMVECHGSQCGFCTPGFVM CCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH SMWSLYEKHGHEHSCANRTVPSREAISNALTGNLCRCTGYRPIVDAAVRMFEAPAPKAPV HHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCC NVEALVRALGTLERTDTFHYEHAGQQFDAPRTVEALARIKEAEPATRILAGSTDIGLWVT CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCHHHHH KQMRELGNIVYVGQIAGLQKLETNGEWIEIGAGVSVEKAYAEIAKQYPELNEMWQRFASL HHHHHHCCEEEEEECCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCC PIRNAGTLGGNIANGSPIGDSMPGLIALGARVIVRGGEIEREMPLEDLYLAYQKKDMAEH CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC EFVVGLKVPTRSGVRQNLQFRTYKLSKRFDSDISAVCAAFAFIADGNLIREPRIAFGGMA EEEEEEECCCCHHHHHCCHHHEEEHHHHHCCHHHHHHHHHHHHHCCCEECCCCHHHCCCC ATSKRATHAEAVLRDAEWHEATAQAAMLALGNDYAPLSDMRATSNYRLESAKNTLYRFWL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHEEEHH ETRPDNPLPKSALDVRAVAAACAPAGV HCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TEPIRFYHRNAIREIKDAPVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVIGERNEA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC GGVDFKAVNACIQFVPTLDGKALFTVEDLRQPDGSLHPVQEAMVECHGSQCGFCTPGFVM CCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH SMWSLYEKHGHEHSCANRTVPSREAISNALTGNLCRCTGYRPIVDAAVRMFEAPAPKAPV HHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCC NVEALVRALGTLERTDTFHYEHAGQQFDAPRTVEALARIKEAEPATRILAGSTDIGLWVT CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCHHHHH KQMRELGNIVYVGQIAGLQKLETNGEWIEIGAGVSVEKAYAEIAKQYPELNEMWQRFASL HHHHHHCCEEEEEECCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCC PIRNAGTLGGNIANGSPIGDSMPGLIALGARVIVRGGEIEREMPLEDLYLAYQKKDMAEH CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC EFVVGLKVPTRSGVRQNLQFRTYKLSKRFDSDISAVCAAFAFIADGNLIREPRIAFGGMA EEEEEEECCCCHHHHHCCHHHEEEHHHHHCCHHHHHHHHHHHHHCCCEECCCCHHHCCCC ATSKRATHAEAVLRDAEWHEATAQAAMLALGNDYAPLSDMRATSNYRLESAKNTLYRFWL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHEEEHH ETRPDNPLPKSALDVRAVAAACAPAGV HCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]