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The map label for this gene is yafV [C]

Identifier: 91781874

GI number: 91781874

Start: 549493

End: 550317

Strand: Reverse

Name: yafV [C]

Synonym: Bxe_A3971

Alternate gene names: 91781874

Gene position: 550317-549493 (Counterclockwise)

Preceding gene: 91781875

Following gene: 91781873

Centisome position: 11.24

GC content: 66.55

Gene sequence:

>825_bases
GTGTCCAGCGGTTCCCTGGAAAGCGCCTTCCGTGTCGCCGCGCTGCAAATGGTGAGCACACCGGATCGCGAGCGCAATCT
CGCCGAAGCCGGGCGTCTGATCGCCGAGGCCGCCGCCGAAGGCGCGCAACTCGTCCTGCTGCCTGAGTACTTCTGCTTCA
TGGGCTTCAAGGACACGGACAAGCTCGCCGTGCGCGAACCCTATCAGGACGGACCGATCCAGCGCTTTCTCGCCGACGCC
GCGCGCCGCCACCAGATCTGGGTGATCGGCGGCACGCTGCCGTTGATGTCGCCTGAAGCCTCGCGCGTGCTGAACACCAC
GCTGGTGTTCGACCCGCAGGGCAACGAGGCCGCGCGCTACGACAAGATCCACCTGTTCAACTTCGAAAAGGGCGCGGAAT
CGTTCGACGAAGCGCGCACCATCTGCCCCGGCGGCGAAGTGCGCAGCTTCGAGGCGCCGTTCGGCCGCGTGGGTCTGTCG
GTCTGCTACGATCTGCGCTTTCCGGAGCTGTACCGGCGCATGGGCGACTGCGCGCTGATCGTGGTGCCGTCGGCGTTCAC
TTACACGACCGGCCGCGCGCATTGGGAAATGCTGCTGCGCGCGCGGGCGGTCGAAAACCAGTGTTACGTGCTGGCCGCGG
CGCAAGGCGGCAAACATGAAAATGGCCGCCGTACGTGGGGCCACAGCATGCTGATCGACCCGTGGGGCGAAATCGTCGCG
CTGCGCGACGAGGGCGCAGGCGTGGTCGCCGGCAATCTCGAGCGTGCGCGCATCGACGAAGTGCGACAGAGTCTGCCCGC
CTGGCGTCATCGTGTGCTCAGTTGA

Upstream 100 bases:

>100_bases
AGCCAGTCTTGAACGACGTACGCGGCGCAAGCGGTTCGCGCCGCCGCCTTGCCGGGAGTTTTCCGAAACGCTCATGAGCG
AAACACAGGTCTCTTCAACC

Downstream 100 bases:

>100_bases
CTCACCTGACCCAATTGATCAACCCACTCGTGTGACATTGAAAGTGCGGCGCCCTGGACTCATTTGTGAGTGACAGACGC
GCTAACCGAATCCTTCGTAT

Product: putative carbon-nitrogen hydrolase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSSGSLESAFRVAALQMVSTPDRERNLAEAGRLIAEAAAEGAQLVLLPEYFCFMGFKDTDKLAVREPYQDGPIQRFLADA
ARRHQIWVIGGTLPLMSPEASRVLNTTLVFDPQGNEAARYDKIHLFNFEKGAESFDEARTICPGGEVRSFEAPFGRVGLS
VCYDLRFPELYRRMGDCALIVVPSAFTYTTGRAHWEMLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLIDPWGEIVA
LRDEGAGVVAGNLERARIDEVRQSLPAWRHRVLS

Sequences:

>Translated_274_residues
MSSGSLESAFRVAALQMVSTPDRERNLAEAGRLIAEAAAEGAQLVLLPEYFCFMGFKDTDKLAVREPYQDGPIQRFLADA
ARRHQIWVIGGTLPLMSPEASRVLNTTLVFDPQGNEAARYDKIHLFNFEKGAESFDEARTICPGGEVRSFEAPFGRVGLS
VCYDLRFPELYRRMGDCALIVVPSAFTYTTGRAHWEMLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLIDPWGEIVA
LRDEGAGVVAGNLERARIDEVRQSLPAWRHRVLS
>Mature_273_residues
SSGSLESAFRVAALQMVSTPDRERNLAEAGRLIAEAAAEGAQLVLLPEYFCFMGFKDTDKLAVREPYQDGPIQRFLADAA
RRHQIWVIGGTLPLMSPEASRVLNTTLVFDPQGNEAARYDKIHLFNFEKGAESFDEARTICPGGEVRSFEAPFGRVGLSV
CYDLRFPELYRRMGDCALIVVPSAFTYTTGRAHWEMLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLIDPWGEIVAL
RDEGAGVVAGNLERARIDEVRQSLPAWRHRVLS

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=271, Percent_Identity=38.0073800738007, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI5031947, Length=278, Percent_Identity=37.0503597122302, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI297632350, Length=278, Percent_Identity=37.0503597122302, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI297632348, Length=278, Percent_Identity=37.0503597122302, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI297632346, Length=203, Percent_Identity=33.0049261083744, Blast_Score=101, Evalue=9e-22,
Organism=Escherichia coli, GI1786412, Length=230, Percent_Identity=32.1739130434783, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17556280, Length=265, Percent_Identity=39.2452830188679, Blast_Score=193, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6323383, Length=281, Percent_Identity=34.1637010676157, Blast_Score=176, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6322335, Length=296, Percent_Identity=34.7972972972973, Blast_Score=164, Evalue=1e-41,
Organism=Drosophila melanogaster, GI17933642, Length=266, Percent_Identity=35.7142857142857, Blast_Score=178, Evalue=4e-45,
Organism=Drosophila melanogaster, GI21355835, Length=270, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30516; Mature: 30385

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGSLESAFRVAALQMVSTPDRERNLAEAGRLIAEAAAEGAQLVLLPEYFCFMGFKDTD
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCC
KLAVREPYQDGPIQRFLADAARRHQIWVIGGTLPLMSPEASRVLNTTLVFDPQGNEAARY
CEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCC
DKIHLFNFEKGAESFDEARTICPGGEVRSFEAPFGRVGLSVCYDLRFPELYRRMGDCALI
CEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEECCCHHHHHHHCCEEEE
VVPSAFTYTTGRAHWEMLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLIDPWGEIVA
EECCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEE
LRDEGAGVVAGNLERARIDEVRQSLPAWRHRVLS
EECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSGSLESAFRVAALQMVSTPDRERNLAEAGRLIAEAAAEGAQLVLLPEYFCFMGFKDTD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCC
KLAVREPYQDGPIQRFLADAARRHQIWVIGGTLPLMSPEASRVLNTTLVFDPQGNEAARY
CEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCC
DKIHLFNFEKGAESFDEARTICPGGEVRSFEAPFGRVGLSVCYDLRFPELYRRMGDCALI
CEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEECCCHHHHHHHCCEEEE
VVPSAFTYTTGRAHWEMLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLIDPWGEIVA
EECCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEE
LRDEGAGVVAGNLERARIDEVRQSLPAWRHRVLS
EECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]