| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gmhB [H]
Identifier: 91781831
GI number: 91781831
Start: 500410
End: 500964
Strand: Reverse
Name: gmhB [H]
Synonym: Bxe_A4014
Alternate gene names: 91781831
Gene position: 500964-500410 (Counterclockwise)
Preceding gene: 91781832
Following gene: 91781830
Centisome position: 10.23
GC content: 66.31
Gene sequence:
>555_bases ATGCCGACCAAAAAAGTGGTGATCCTCGACCGCGACGGCGTGATCAACGTCGACTCCGACGCGTTCATCAAGTCGCCGGA CGAATGGGTCGCCCTGCCCGGTGCGCTGGAAGCCATCGCGCGTCTGAACCAGGCGGGCTACCGCGTGGCGATCGCGACCA ACCAGTCGGGCATCGGCCGCGGCCTGTTCGACATGAACGCGCTCAATGCAATGCACCTGAAGATGCATCGCATGGCGGCC GCCGTCGGCGGGCGCATCGACGCGGTGTTCTTCTGCCCGCACACGGCGGAGGACCACTGCGAATGCCGCAAGCCGAAGCC CGGCATGCTGAAGATGATCACGGAGCGCTTCGAGGTCGATCCGGAAAATACGCCGGTAGTGGGCGACGCCATGCGCGATC TGCAAGCCGGCGCGGCGCTCGGCCATCCGGTTCACCTGGTGCTGACGGGCAAGGGCCGCAAAACGCTCGCGGCCGGCGGC TTGCCCGAAGGCACGATCGTGCACGACGACCTGCGTGCGTTCGCGCTCGACTTCCTCGCCGACGCTCAAGAGTGA
Upstream 100 bases:
>100_bases CCCGCGTTGCGCGCCAACCGTCTGGCCTTGCTCGGCGCACTGCATCAGCAGATGAACTGCGTCGCCGACATTTCCCGACT CGCCGCCTGAGCCCCGCGCC
Downstream 100 bases:
>100_bases CGCGCGCCACGCGCGTCCCCATTCCTCACTGACCACGCCGATGCGCTTCATCCGTTCTTTGCTTCTGCTGATCTACTTCG TTCTGTTCACGGTGCCGTAC
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPTKKVVILDRDGVINVDSDAFIKSPDEWVALPGALEAIARLNQAGYRVAIATNQSGIGRGLFDMNALNAMHLKMHRMAA AVGGRIDAVFFCPHTAEDHCECRKPKPGMLKMITERFEVDPENTPVVGDAMRDLQAGAALGHPVHLVLTGKGRKTLAAGG LPEGTIVHDDLRAFALDFLADAQE
Sequences:
>Translated_184_residues MPTKKVVILDRDGVINVDSDAFIKSPDEWVALPGALEAIARLNQAGYRVAIATNQSGIGRGLFDMNALNAMHLKMHRMAA AVGGRIDAVFFCPHTAEDHCECRKPKPGMLKMITERFEVDPENTPVVGDAMRDLQAGAALGHPVHLVLTGKGRKTLAAGG LPEGTIVHDDLRAFALDFLADAQE >Mature_183_residues PTKKVVILDRDGVINVDSDAFIKSPDEWVALPGALEAIARLNQAGYRVAIATNQSGIGRGLFDMNALNAMHLKMHRMAAA VGGRIDAVFFCPHTAEDHCECRKPKPGMLKMITERFEVDPENTPVVGDAMRDLQAGAALGHPVHLVLTGKGRKTLAAGGL PEGTIVHDDLRAFALDFLADAQE
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=154, Percent_Identity=35.0649350649351, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082027, Length=141, Percent_Identity=30.4964539007092, Blast_Score=85, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 19792; Mature: 19661
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKKVVILDRDGVINVDSDAFIKSPDEWVALPGALEAIARLNQAGYRVAIATNQSGIGR CCCCEEEEEECCCEEEECCCCEEECCCCEEECCHHHHHHHHHCCCCEEEEEEECCCCCCC GLFDMNALNAMHLKMHRMAAAVGGRIDAVFFCPHTAEDHCECRKPKPGMLKMITERFEVD CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHCCC PENTPVVGDAMRDLQAGAALGHPVHLVLTGKGRKTLAAGGLPEGTIVHDDLRAFALDFLA CCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCEEHHHHHHHHHHHHH DAQE CCCC >Mature Secondary Structure PTKKVVILDRDGVINVDSDAFIKSPDEWVALPGALEAIARLNQAGYRVAIATNQSGIGR CCCEEEEEECCCEEEECCCCEEECCCCEEECCHHHHHHHHHCCCCEEEEEEECCCCCCC GLFDMNALNAMHLKMHRMAAAVGGRIDAVFFCPHTAEDHCECRKPKPGMLKMITERFEVD CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHCCC PENTPVVGDAMRDLQAGAALGHPVHLVLTGKGRKTLAAGGLPEGTIVHDDLRAFALDFLA CCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCEEHHHHHHHHHHHHH DAQE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919; 12101286 [H]