| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is surA [H]
Identifier: 91781822
GI number: 91781822
Start: 491751
End: 493112
Strand: Direct
Name: surA [H]
Synonym: Bxe_A4023
Alternate gene names: 91781822
Gene position: 491751-493112 (Clockwise)
Preceding gene: 91781821
Following gene: 91781823
Centisome position: 10.04
GC content: 64.54
Gene sequence:
>1362_bases GTGGCAATCATGAAAAAGCTTCGCTTGGCAACGCTTGCGGCCGGTCTTGCGGCCGCGGCGTCTTTCCTGTCGGTTGCGCC GGTGCAGGCGCAAGCGCTCTCCGGCAGTGGCGGCCAGACGGTCGACACCATTGCCGCAGTGGTCAACAACGGTGTCATCA CGCGGCGCGAACTCGACGAACGCATGGGCCTGATCACCCGCCGCCTGAACCAGCAGAACGCGCCGGTCCCGCCAATGGAC CAGCTGCGCCAGCAGGTGCTCAACCAGATGGTGCTGGAACGCATCCAGTTGCAGAAGGCGAAAGAAGACGGCATCACTAT CGACGACGCCACCGTGCAAAAAACGCTCGAACGGCTTGCCGCGGCGAACAACCTGACACTCGACGTGTACCGCTCGCGGA TCGAGGCGCAAGGCGTGCCCTGGACCACGTTCACCAGCGACGCGCGGACCGAACTCACGCTCTCGCGCCTGCGCGAGAAG GAAGTGGACAGCAAGGTCACGGTCTCGGACGCCGAAGTCGCGAACTACATTGCCAGCCAGCGCGGCCCGAACGCCGGCCT GACGAGCGACCTGCATTTGCAGCACATTTTTCTGAAGGCGCCGCTGAACGCGTCCGAAACCGATATCGAAGCGGCACAGC GGAAGGCTCAGGCGTTGCTCGCCGAGGCCAAGGGCGGCGCCAACTTCGAAAAGCTGGCGAAGTCGAATTCGCAAGCGCCG GATGCATCGAAAGGCGGGGACACGGGTTTCGTTTCGCCGTCCAAACTGCCGCCTGAATTCGTCAAGGCTGCATCGGCACT GCGCCCGGGCGAGGTCAATCCGGATCTGATCCGCACCAGCGACGGTTTCGAGATCGTGCGGCTAGTCGATCGCCGCGCGG GGCAGGGCACCAGCTCGGATGCGCCGAAGCTCGTGCAAACGCACGTGCGTCACATTCTGCTGCGCGTCGGCGACGGCATG TCGGAGCCGCAGGCGCGCCAGAAGCTGCTCGAAATCAAGAACGAGATCGCCGCGGGCGGCGACTTCGCCAAATTCGCGCA CACCTACTCGCAAGACGGTTCGTCGTCGCAAGGCGGTGACCTCGGCTGGATCAGCCCGGGCGAGACGGTGCCGGAATTCG AGCGCGCGATGAACAGCCTGCAGGACGGCCAGATCAGCGACCCGGTTCGCAGCGAATATGGCTACCACCTGATTCAGGTG CTGGGCCGCCGCGAATCCGAAGGCTCGGTCGCGCAGCAGATGGATCTGGCGCGCCAGGCCATCGGCCAGCGCAAGGCGGA ACAGGCCTACGCCGACTGGTTGCGCGAACTGCGCGACACCGCGTATGTCGAAGTGAAGCCCACGCTGTCGAGCACGCAAT AA
Upstream 100 bases:
>100_bases CCGCCGGAATCGCGTTTCACCAATTACGAATGACGCTCGCCCGATCATTTATAAAGTGCGAAAAGACGGGCCAGGCGCGC CCGACATCATTGGAGTATCT
Downstream 100 bases:
>100_bases CCGTCATGACAACCGCCGCCCAGTCCGTCCGCCCACCGTTGCAGATCGCGATCACGACCGGCGAGCCCGCCGGCGTCGGC CCCGAGCTGACGGCGCAGGC
Product: putative peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MAIMKKLRLATLAAGLAAAASFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMD QLRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREK EVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKAPLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAP DASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGM SEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQV LGRRESEGSVAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVEVKPTLSSTQ
Sequences:
>Translated_453_residues MAIMKKLRLATLAAGLAAAASFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMD QLRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREK EVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKAPLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAP DASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGM SEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQV LGRRESEGSVAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVEVKPTLSSTQ >Mature_452_residues AIMKKLRLATLAAGLAAAASFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMDQ LRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREKE VDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKAPLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPD ASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGMS EPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVL GRRESEGSVAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVEVKPTLSSTQ
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Escherichia coli, GI1786238, Length=438, Percent_Identity=34.4748858447489, Blast_Score=218, Evalue=5e-58,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 49101; Mature: 48970
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIMKKLRLATLAAGLAAAASFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDE CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH RMGLITRRLNQQNAPVPPMDQLRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQ HCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHC RGPNAGLTSDLHLQHIFLKAPLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAP CCCCCCCCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC DASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSD CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCC APKLVQTHVRHILLRVGDGMSEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGD CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC LGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQA CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IGQRKAEQAYADWLRELRDTAYVEVKPTLSSTQ HHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC >Mature Secondary Structure AIMKKLRLATLAAGLAAAASFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH RMGLITRRLNQQNAPVPPMDQLRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQ HCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHC RGPNAGLTSDLHLQHIFLKAPLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAP CCCCCCCCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC DASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSD CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCC APKLVQTHVRHILLRVGDGMSEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGD CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC LGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQA CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IGQRKAEQAYADWLRELRDTAYVEVKPTLSSTQ HHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA