Click here to switch to the map view.

The map label for this gene is fdhD [H]

Identifier: 91781811

GI number: 91781811

Start: 477480

End: 478319

Strand: Reverse

Name: fdhD [H]

Synonym: Bxe_A4034

Alternate gene names: 91781811

Gene position: 478319-477480 (Counterclockwise)

Preceding gene: 91781814

Following gene: 91781791

Centisome position: 9.77

GC content: 66.67

Gene sequence:

>840_bases
TTGAACGAACTGGAAACAGCCGGACAGCCGGGCGCGGTGGAACGCCAGGTGCGCCGGCATCGCGGCGCGGAGGTCGAAAC
CGTCACCGACCACGTCGGTCAGGAATGGCCGGTGGCGCTCGTCTTCAACGGCATTTCGCACGCGGTGATGATGTGCACGC
CGCGCGATCTGGAAGCATTCGCGGTCGGATTCGCCATTTCCGAGGGGATCGTGGAGCGCGGCAGCGACATTCAGGACATC
GAGGTCGAACTGCATGACAATGACGAATTGCCGCACGCCGAAGTGCAGCTACAGGTGGTGCAGCAGGCATTCGTCGCGCT
GAAGGAAAAGCGCCGCGCGCTCGCCGGGCGCACCGGTTGCGGCGTGTGCGGTATCGAAAGCATCGATCTGCTGGATCTCG
AACCCGAGCGTGTGCCGGACACCGGCTTTCTGCAACGGCTTGCGCCGGACGCCATCGCGCGCGCCGCCCGCGAGTTGCCC
GAGCATCAGGCGTTGACGCGGCTGACCGGCGGTTTGCACGCCGCCGCCTGGTGCGACGCGGCGGGCGCGATTCGCTACGC
GTTCGAGGACGTGGGCCGCCACAACGCGCTCGACAAGCTGATCGGCCAGCTCGTGCTCGATCGCGTGGATACCAGAGAGG
GTTTCGTGTTTCTGTCGAGCCGCGCCAGCTACGAGCTGGTGCGCAAGGCCGCGCGCGTCGGCGTGCCGATGCTCGCCACG
ATCTCGGCGCCGTCTTCGCTGGCCATTGCGATCGCCCGCAAGGCGGGCGTGCGGCTGGTGAGCTTCTGCCGCGAAAAGAG
CTACGTCGACTACGATACGTTGCTGCCGGCGCAGCGTTGA

Upstream 100 bases:

>100_bases
TATTTTAGAACCTTATTCGCGCGATGGCGGCGTGGTCTGGCGGCAACGCACGAGCCCGCCAACTGCTCAGGCACGCGCAG
CATGGCAAAGGAGTACTAGC

Downstream 100 bases:

>100_bases
ACGGCAGCGTGCCCGACCTGCGAGCGGGCGAACCCCCAGCCGCGCAAAAAGCTGGAGCCCGCCCAAGCCGGCCGGTCCGT
TCTACGCCCGAGCGCTCGCG

Product: formate dehydrogenase, subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNELETAGQPGAVERQVRRHRGAEVETVTDHVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAISEGIVERGSDIQDI
EVELHDNDELPHAEVQLQVVQQAFVALKEKRRALAGRTGCGVCGIESIDLLDLEPERVPDTGFLQRLAPDAIARAARELP
EHQALTRLTGGLHAAAWCDAAGAIRYAFEDVGRHNALDKLIGQLVLDRVDTREGFVFLSSRASYELVRKAARVGVPMLAT
ISAPSSLAIAIARKAGVRLVSFCREKSYVDYDTLLPAQR

Sequences:

>Translated_279_residues
MNELETAGQPGAVERQVRRHRGAEVETVTDHVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAISEGIVERGSDIQDI
EVELHDNDELPHAEVQLQVVQQAFVALKEKRRALAGRTGCGVCGIESIDLLDLEPERVPDTGFLQRLAPDAIARAARELP
EHQALTRLTGGLHAAAWCDAAGAIRYAFEDVGRHNALDKLIGQLVLDRVDTREGFVFLSSRASYELVRKAARVGVPMLAT
ISAPSSLAIAIARKAGVRLVSFCREKSYVDYDTLLPAQR
>Mature_279_residues
MNELETAGQPGAVERQVRRHRGAEVETVTDHVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAISEGIVERGSDIQDI
EVELHDNDELPHAEVQLQVVQQAFVALKEKRRALAGRTGCGVCGIESIDLLDLEPERVPDTGFLQRLAPDAIARAARELP
EHQALTRLTGGLHAAAWCDAAGAIRYAFEDVGRHNALDKLIGQLVLDRVDTREGFVFLSSRASYELVRKAARVGVPMLAT
ISAPSSLAIAIARKAGVRLVSFCREKSYVDYDTLLPAQR

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=235, Percent_Identity=45.531914893617, Blast_Score=198, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30469; Mature: 30469

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELETAGQPGAVERQVRRHRGAEVETVTDHVGQEWPVALVFNGISHAVMMCTPRDLEAF
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHEEECCHHCEEEEECCCCHHHH
AVGFAISEGIVERGSDIQDIEVELHDNDELPHAEVQLQVVQQAFVALKEKRRALAGRTGC
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVCGIESIDLLDLEPERVPDTGFLQRLAPDAIARAARELPEHQALTRLTGGLHAAAWCDA
CCCCCCCCEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHH
AGAIRYAFEDVGRHNALDKLIGQLVLDRVDTREGFVFLSSRASYELVRKAARVGVPMLAT
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
ISAPSSLAIAIARKAGVRLVSFCREKSYVDYDTLLPAQR
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC
>Mature Secondary Structure
MNELETAGQPGAVERQVRRHRGAEVETVTDHVGQEWPVALVFNGISHAVMMCTPRDLEAF
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHEEECCHHCEEEEECCCCHHHH
AVGFAISEGIVERGSDIQDIEVELHDNDELPHAEVQLQVVQQAFVALKEKRRALAGRTGC
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVCGIESIDLLDLEPERVPDTGFLQRLAPDAIARAARELPEHQALTRLTGGLHAAAWCDA
CCCCCCCCEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHH
AGAIRYAFEDVGRHNALDKLIGQLVLDRVDTREGFVFLSSRASYELVRKAARVGVPMLAT
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
ISAPSSLAIAIARKAGVRLVSFCREKSYVDYDTLLPAQR
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA