| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781716
Identifier: 91781716
GI number: 91781716
Start: 365953
End: 367794
Strand: Reverse
Name: 91781716
Synonym: Bxe_A4130
Alternate gene names: NA
Gene position: 367794-365953 (Counterclockwise)
Preceding gene: 91781719
Following gene: 91781715
Centisome position: 7.51
GC content: 65.58
Gene sequence:
>1842_bases ATGAACTTGTCCTTCGTGAAGCTGTTTTTGAAGCGCCCGGCTAGCGCATTCCGCGTACCGCACGCCGTGTCCGCTCGCCG GATGCTCGGCGCGGCGGCGCTCGCCGTCTGGGCGCTGGCTGCCGTGCCCGCGCACGCGCAGGATTCATCGCCGGACTCGG ACGACACCTCGGTCACCCTCCCCGACCCGCTCGGGCCGGCCTCGGCGGAAGACCAGAAGTCCCTGCCCGGGGTGCCGCTG ACGAGCCAGATCGTATTCCAGGTGCTCGCCGCCGAAGTCGCGCTGCAGCGCGACCAGCCGGCGCCCGCCTATCAGACCTA CCTCGCCCTTGCGCGCGACACGCACGATCCTCGCATGGCGCAACGCGCCACCGAAATCGCGCTGGCCGCGCAGAGCCCGT CCGACGCATTGGCCGCCGCGCAATTGTGGCAGCAGTATGCGCCGAACTCGGAACGCGCCGCGCAACTCGACGCGTCGCTG CTCGTGCTGTCCGGCCGCCCTGACGACGCGGAGCCGATCCTCGCCCGCGAACTCGCGCGGGTGCCCGCGGACAATCGCGG CAGCGCGATTCTGGCGCTGCAGCTGCTGCTCTCGCGCGGCCCGAACCGGATCGGCGGCCTGCACGTGCTGCAGGACCTGC TCAAGAACGACCTGAACCGGCCGGAAGCGCAACTGGCACTTGCACGACAGCAGCTCGTATCGGACGACGCGCCGGGTGCG CGCAAGTCGCTCGAGCAGGCGCTCGCGCTCAAGCCCGACTATTTGCCGGCCGCGCTGATGCTGTCGCAAATGGGCCCGGA AGAGCGCAAGGAAGGCATCGCCTCGCTCGAAAAGTACGTGCAGCAGAATCCGAAATCGCATGACGCCCGTCTCGCGCTCG CCCAGATGTATCTTGCGAGCGACCGTCTGGACGACGCGCAGAAGCAGTTCGAGATCATGCACAGGAACAACGCGAACGAT CTCACGCCGCTCATGGCGCTCGCGCTGATCAAGATCCAGCAGAAGAATTTCAATGAAGCGCAAACGTACCTGACCCAGTA CGCGCAGCAAGCCGAAAAAACGCCGGGCGCGGATCCCGGCCAGGCGTATATCTACCTTGCACAACTGTCGCTCGAACAGA AGAACGACGCGGCCGCGAGCGACTGGCTGAACAAAATCTCGCCGTCGAGCCAGCAATATGTGCCCGCGCAGATCACGCGC GCACAATTGCTCGCCAAGCAGGGCAAGGCCGACGACGCGCGCAAGCTGCTCGCCAATCTGCCGGCGCCGGACCCGCGCGA CCAGGCGCTGATCGCGCGCACGGACGCGGCGATCCTGTTCGATGCGAGGCGTTACCCCGAGGCCGAAACGCGCCTGCAGC AAGCCACGGCGCAGTTCCCCGACGACCCCGATCTGACCTACGACTACGCGATGTCCGCCGAAAAGACCGGCCATTACGAC GTCATGGAAACGCAGTTGCGCAAGCTGATCCAGACGCAGCCCGACAATCCGCAAGCGTATAACGCGCTCGGCTACTCGCT GGCCGATCGCAATCAGCGCCTCGCCGAGGCGGACAAGCTGGTCGAGAAGGCCTCCTCGTTGGCGCCGAACGACGCATTCA TCATGGACAGCGTCGGCTGGGTCAAATACCGGATGGGCGACACGTCGGACGCGATCAAGCTGCTGCGCAAAGCCTACGAC ATGCAGCCGAATGCTGAAATCGGCGCGCACCTCGGCGAAGTGTTGTGGAAAACGGGCAATCAGGATCAGGCCCGCGCCGC TTTCCGCGACGCGCGCAAGCTCGAACCGGACAACGACACGCTGGTCAAAACGCTCCAACGTCTTCAGGTGAACGATCTTT GA
Upstream 100 bases:
>100_bases GCAACTCTGGCATGTCTAACTGGTCTGCAACTTGCGTGAGTGGTTGTGCGCGTATTGTAGCGAGCGCGTTACAATCGTCC GAAACATTGAACGGATTTCC
Downstream 100 bases:
>100_bases TGCGTCTTTCCCGTCTGATTTCCTTTCCCCGGGCGCCGCGTGGCGCGGCGCTCGGATTCGCAGCGGCGGCGGTTGTCGCA TTGGCCGGTTGTGCGTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MNLSFVKLFLKRPASAFRVPHAVSARRMLGAAALAVWALAAVPAHAQDSSPDSDDTSVTLPDPLGPASAEDQKSLPGVPL TSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQYAPNSERAAQLDASL LVLSGRPDDAEPILARELARVPADNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGA RKSLEQALALKPDYLPAALMLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFEIMHRNNAND LTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQAYIYLAQLSLEQKNDAAASDWLNKISPSSQQYVPAQITR AQLLAKQGKADDARKLLANLPAPDPRDQALIARTDAAILFDARRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYD VMETQLRKLIQTQPDNPQAYNALGYSLADRNQRLAEADKLVEKASSLAPNDAFIMDSVGWVKYRMGDTSDAIKLLRKAYD MQPNAEIGAHLGEVLWKTGNQDQARAAFRDARKLEPDNDTLVKTLQRLQVNDL
Sequences:
>Translated_613_residues MNLSFVKLFLKRPASAFRVPHAVSARRMLGAAALAVWALAAVPAHAQDSSPDSDDTSVTLPDPLGPASAEDQKSLPGVPL TSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQYAPNSERAAQLDASL LVLSGRPDDAEPILARELARVPADNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGA RKSLEQALALKPDYLPAALMLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFEIMHRNNAND LTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQAYIYLAQLSLEQKNDAAASDWLNKISPSSQQYVPAQITR AQLLAKQGKADDARKLLANLPAPDPRDQALIARTDAAILFDARRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYD VMETQLRKLIQTQPDNPQAYNALGYSLADRNQRLAEADKLVEKASSLAPNDAFIMDSVGWVKYRMGDTSDAIKLLRKAYD MQPNAEIGAHLGEVLWKTGNQDQARAAFRDARKLEPDNDTLVKTLQRLQVNDL >Mature_613_residues MNLSFVKLFLKRPASAFRVPHAVSARRMLGAAALAVWALAAVPAHAQDSSPDSDDTSVTLPDPLGPASAEDQKSLPGVPL TSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQYAPNSERAAQLDASL LVLSGRPDDAEPILARELARVPADNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGA RKSLEQALALKPDYLPAALMLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFEIMHRNNAND LTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQAYIYLAQLSLEQKNDAAASDWLNKISPSSQQYVPAQITR AQLLAKQGKADDARKLLANLPAPDPRDQALIARTDAAILFDARRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYD VMETQLRKLIQTQPDNPQAYNALGYSLADRNQRLAEADKLVEKASSLAPNDAFIMDSVGWVKYRMGDTSDAIKLLRKAYD MQPNAEIGAHLGEVLWKTGNQDQARAAFRDARKLEPDNDTLVKTLQRLQVNDL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 67291; Mature: 67291
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSFVKLFLKRPASAFRVPHAVSARRMLGAAALAVWALAAVPAHAQDSSPDSDDTSVTL CCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEC PDPLGPASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMA CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH QRATEIALAAQSPSDALAAAQLWQQYAPNSERAAQLDASLLVLSGRPDDAEPILARELAR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHH VPADNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGA CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH RKSLEQALALKPDYLPAALMLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLAS HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH DRLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC QAYIYLAQLSLEQKNDAAASDWLNKISPSSQQYVPAQITRAQLLAKQGKADDARKLLANL CEEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHC PAPDPRDQALIARTDAAILFDARRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYD CCCCCCCCEEEEECCHHEEECCHHCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHH VMETQLRKLIQTQPDNPQAYNALGYSLADRNQRLAEADKLVEKASSLAPNDAFIMDSVGW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE VKYRMGDTSDAIKLLRKAYDMQPNAEIGAHLGEVLWKTGNQDQARAAFRDARKLEPDNDT EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH LVKTLQRLQVNDL HHHHHHHHHHCCC >Mature Secondary Structure MNLSFVKLFLKRPASAFRVPHAVSARRMLGAAALAVWALAAVPAHAQDSSPDSDDTSVTL CCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEC PDPLGPASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMA CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH QRATEIALAAQSPSDALAAAQLWQQYAPNSERAAQLDASLLVLSGRPDDAEPILARELAR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHH VPADNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGA CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH RKSLEQALALKPDYLPAALMLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLAS HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH DRLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC QAYIYLAQLSLEQKNDAAASDWLNKISPSSQQYVPAQITRAQLLAKQGKADDARKLLANL CEEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHC PAPDPRDQALIARTDAAILFDARRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYD CCCCCCCCEEEEECCHHEEECCHHCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHH VMETQLRKLIQTQPDNPQAYNALGYSLADRNQRLAEADKLVEKASSLAPNDAFIMDSVGW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE VKYRMGDTSDAIKLLRKAYDMQPNAEIGAHLGEVLWKTGNQDQARAAFRDARKLEPDNDT EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH LVKTLQRLQVNDL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]